CircNet

General Information

circRNA Basic Information

CircID	chr11:62520086\|62520229
Strand	+
CircType	exon
Host Gene	ENSG00000124942.12;
Algorism	CIRI2;
Sequence	CTGAAAGGACCCAAAGTGAAGGGCGATGTGGATGTTACCCTTCCTAAAGTGGAAGGTGACCTCAAGGGCCCAGAAGCTGACATCAAGGGCCCAAAAGTGGACATCAACACCCCTGATGTGGATGTTCATGGCCCAGACTGGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr11:62520086\|62520229	hsa-miR-609	0	0	1
chr11:62520086\|62520229	hsa-miR-612	0	0	1
chr11:62520086\|62520229	hsa-miR-622	0	0	1
chr11:62520086\|62520229	hsa-miR-651-5p	0	0	1
chr11:62520086\|62520229	hsa-miR-651-3p	0	0	1
chr11:62520086\|62520229	hsa-miR-1249-5p	0	0	1
chr11:62520086\|62520229	hsa-miR-1249-3p	0	0	1
chr11:62520086\|62520229	hsa-miR-296-5p	0	0	1
chr11:62520086\|62520229	hsa-miR-1285	0	0	1
chr11:62520086\|62520229	hsa-miR-543	0	1	0
chr11:62520086\|62520229	hsa-miR-6782-5p	0	1	0
chr11:62520086\|62520229	hsa-miR-4436b-5p	0	1	0
chr11:62520086\|62520229	hsa-miR-6785-3p	0	1	0
chr11:62520086\|62520229	hsa-miR-6837-3p	0	1	0
chr11:62520086\|62520229	hsa-miR-1296-5p	1	0	0
chr11:62520086\|62520229	hsa-miR-6508-3p	0	1	0
chr11:62520086\|62520229	hsa-miR-6851-3p	0	1	0
chr11:62520086\|62520229	hsa-miR-3085-5p	0	1	0
chr11:62520086\|62520229	hsa-miR-6799-3p	1	0	0
chr11:62520086\|62520229	hsa-miR-6773-5p	0	1	0
chr11:62520086\|62520229	hsa-miR-6724-5p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:62520086\|62520229
ORF Type	ORF1
Protein Length	48
Nucleotide Length	144
Protein Sequence	LKGPKVKGDVDVTLPKVEGDLKGPEADIKGPKVDINTPDVDVHGPDWH
Nucleotide Sequence	CTGAAAGGACCCAAAGTGAAGGGCGATGTGGATGTTACCCTTCCTAAAGTGGAAGGTGACCTCAAGGGCCCAGAAGCTGACATCAAGGGCCCAAAAGTGGACATCAACACCCCTGATGTGGATGTTCATGGCCCAGACTGGCAC

CircID	chr11:62520086\|62520229
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MWMLPFLKWKVTSRAQKLTSRAQKWTSTPLMWMFMAQTG
Nucleotide Sequence	ATGTGGATGTTACCCTTCCTAAAGTGGAAGGTGACCTCAAGGGCCCAGAAGCTGACATCAAGGGCCCAAAAGTGGACATCAACACCCCTGATGTGGATGTTCATGGCCCAGACTGGC

CircID	chr11:62520086\|62520229
ORF Type	ORF3
Protein Length	43
Nucleotide Length	129
Protein Sequence	MNIHIRGVDVHFWALDVSFWALEVTFHFRKGNIHIALHFGSFQ
Nucleotide Sequence	ATGAACATCCACATCAGGGGTGTTGATGTCCACTTTTGGGCCCTTGATGTCAGCTTCTGGGCCCTTGAGGTCACCTTCCACTTTAGGAAGGGTAACATCCACATCGCCCTTCACTTTGGGTCCTTTCAG

CircID	chr11:62520086\|62520229
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MMSTFGPLMSASGPLRSPSTLGRVTSTSPFTLGPF
Nucleotide Sequence	TTGATGTCCACTTTTGGGCCCTTGATGTCAGCTTCTGGGCCCTTGAGGTCACCTTCCACTTTAGGAAGGGTAACATCCACATCGCCCTTCACTTTGGGTCCTTTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information