CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62520928|62521087
Strand -
CircType exon
Host Gene ENSG00000124942.12;
Algorism CIRI2;
Sequence CTTCAATGTCTACCTCTGGCCCTTTCAGATCACTTTCCACCTTAGGTAGTGAAACATCCACATCACCCTTCACCTTGGGACCTTTCAGGTGCAAATCAAAGTCAGGCATAGAGATTTTGGGAGCTTTGATGTTCATCTCAGGCATCTTAAATTTGGGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62520928|62521087 hsa-let-7b-5p 0 0 1
chr11:62520928|62521087 hsa-let-7b-3p 0 0 1
chr11:62520928|62521087 hsa-let-7c-5p 0 0 1
chr11:62520928|62521087 hsa-let-7c-3p 0 0 1
chr11:62520928|62521087 hsa-let-7d-5p 0 0 1
chr11:62520928|62521087 hsa-let-7d-3p 0 0 1
chr11:62520928|62521087 hsa-let-7e-5p 0 0 1
chr11:62520928|62521087 hsa-let-7e-3p 0 0 1
chr11:62520928|62521087 hsa-miR-18a-5p 0 0 1
chr11:62520928|62521087 hsa-miR-18a-3p 0 0 1
chr11:62520928|62521087 hsa-miR-98-5p 0 0 1
chr11:62520928|62521087 hsa-miR-98-3p 0 0 1
chr11:62520928|62521087 hsa-let-7g-5p 0 0 1
chr11:62520928|62521087 hsa-let-7g-3p 0 0 1
chr11:62520928|62521087 hsa-let-7i-5p 0 0 1
chr11:62520928|62521087 hsa-let-7i-3p 0 0 1
chr11:62520928|62521087 hsa-miR-143-5p 0 0 1
chr11:62520928|62521087 hsa-miR-143-3p 0 0 1
chr11:62520928|62521087 hsa-miR-150-5p 0 0 1
chr11:62520928|62521087 hsa-miR-150-3p 0 0 1
chr11:62520928|62521087 hsa-miR-379-5p 0 0 1
chr11:62520928|62521087 hsa-miR-379-3p 0 0 1
chr11:62520928|62521087 hsa-miR-18b-5p 0 0 1
chr11:62520928|62521087 hsa-miR-18b-3p 0 0 1
chr11:62520928|62521087 hsa-miR-488-5p 0 0 1
chr11:62520928|62521087 hsa-miR-488-3p 0 0 1
chr11:62520928|62521087 hsa-miR-507 0 0 1
chr11:62520928|62521087 hsa-miR-557 0 0 1
chr11:62520928|62521087 hsa-miR-216b-5p 0 0 1
chr11:62520928|62521087 hsa-miR-216b-3p 0 0 1
chr11:62520928|62521087 hsa-miR-330-3p 0 0 1
chr11:62520928|62521087 hsa-miR-532-5p 0 0 1
chr11:62520928|62521087 hsa-let-7a 0 0 1
chr11:62520928|62521087 hsa-let-7f 0 0 1
chr11:62520928|62521087 hsa-miR-1201 0 0 1
chr11:62520928|62521087 hsa-miR-1245 0 0 1
chr11:62520928|62521087 hsa-miR-661 1 0 0
chr11:62520928|62521087 hsa-miR-1293 0 1 0
chr11:62520928|62521087 hsa-miR-1245a 0 1 0
chr11:62520928|62521087 hsa-miR-3141 1 0 0
chr11:62520928|62521087 hsa-miR-4257 0 1 0
chr11:62520928|62521087 hsa-miR-4281 1 0 0
chr11:62520928|62521087 hsa-miR-4458 0 1 0
chr11:62520928|62521087 hsa-miR-4481 1 0 0
chr11:62520928|62521087 hsa-miR-4657 1 0 0
chr11:62520928|62521087 hsa-miR-4739 1 0 0
chr11:62520928|62521087 hsa-miR-6745 0 1 0
chr11:62520928|62521087 hsa-miR-7150 1 0 0
chr11:62520928|62521087 hsa-miR-12114 0 1 0
chr11:62520928|62521087 hsa-miR-4435 1 0 0
chr11:62520928|62521087 hsa-miR-6734-5p 1 0 0
chr11:62520928|62521087 hsa-miR-1227-5p 1 0 0
chr11:62520928|62521087 hsa-miR-3190-3p 1 0 0
chr11:62520928|62521087 hsa-miR-4633-5p 0 1 0
chr11:62520928|62521087 hsa-miR-4640-5p 1 1 0
chr11:62520928|62521087 hsa-miR-6781-5p 1 0 0
chr11:62520928|62521087 hsa-miR-6877-5p 1 0 0
chr11:62520928|62521087 hsa-miR-7162-3p 0 1 0
chr11:62520928|62521087 hsa-miR-6895-5p 1 1 0
chr11:62520928|62521087 hsa-miR-423-5p 1 0 0
chr11:62520928|62521087 hsa-miR-7106-3p 1 0 0
chr11:62520928|62521087 hsa-miR-6814-5p 0 1 0
chr11:62520928|62521087 hsa-miR-4766-5p 0 1 0
chr11:62520928|62521087 hsa-miR-500a-3p 0 1 0
chr11:62520928|62521087 hsa-miR-6815-5p 1 0 0
chr11:62520928|62521087 hsa-miR-6851-5p 1 0 0
chr11:62520928|62521087 hsa-miR-6836-5p 1 0 0
chr11:62520928|62521087 hsa-miR-10526-3p 1 0 0
chr11:62520928|62521087 hsa-miR-1909-3p 1 0 0
chr11:62520928|62521087 hsa-miR-4726-5p 1 1 0
chr11:62520928|62521087 hsa-miR-4436b-3p 1 0 0
chr11:62520928|62521087 hsa-miR-6845-5p 1 0 0
chr11:62520928|62521087 hsa-miR-10398-5p 1 0 0
chr11:62520928|62521087 hsa-miR-550a-5p 0 1 0
chr11:62520928|62521087 hsa-miR-3622b-3p 0 1 0
chr11:62520928|62521087 hsa-miR-10525-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:62520928|62521087
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MSTSGPFRSLSTLGSETSTSPFTLGPFRCKSKSGIEILGALMFISGILNLG
Nucleotide Sequence ATGTCTACCTCTGGCCCTTTCAGATCACTTTCCACCTTAGGTAGTGAAACATCCACATCACCCTTCACCTTGGGACCTTTCAGGTGCAAATCAAAGTCAGGCATAGAGATTTTGGGAGCTTTGATGTTCATCTCAGGCATCTTAAATTTGGGC
CircID chr11:62520928|62521087
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MPEMNIKAPKISMPDFDLHLKGPKVKGDVDVSLPKVESDLKGPEVDIE
Nucleotide Sequence ATGCCTGAGATGAACATCAAAGCTCCCAAAATCTCTATGCCTGACTTTGATTTGCACCTGAAAGGTCCCAAGGTGAAGGGTGATGTGGATGTTTCACTACCTAAGGTGGAAAGTGATCTGAAAGGGCCAGAGGTAGACATTGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab