CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62521108|62521309
Strand -
CircType exon
Host Gene ENSG00000124942.12;
Algorism CIRI2;
Sequence CTTCAATATTGACATCAGGTGTGTCAATGTCCAAACTGGGGCCTTTTATGTCAATTTCAGGGCCCTTGAGATCACCTTCCACTTTGGGCAGAGAGACATCCACATCACCTTTCACTTTGGGACCCTTCAAGTTAAAGTCAATGTCAGGCATGGAGATTTTGGGGGCCTTGATGTTCATCTCTGGCATCTTGAACTTTGGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62521108|62521309 hsa-miR-143-5p 0 0 1
chr11:62521108|62521309 hsa-miR-143-3p 0 0 1
chr11:62521108|62521309 hsa-miR-136-5p 0 0 1
chr11:62521108|62521309 hsa-miR-136-3p 0 0 1
chr11:62521108|62521309 hsa-miR-488-5p 0 0 1
chr11:62521108|62521309 hsa-miR-488-3p 0 0 1
chr11:62521108|62521309 hsa-miR-489-5p 0 0 1
chr11:62521108|62521309 hsa-miR-489-3p 0 0 1
chr11:62521108|62521309 hsa-miR-520g-5p 0 0 1
chr11:62521108|62521309 hsa-miR-520g-3p 0 0 1
chr11:62521108|62521309 hsa-miR-520h 0 0 1
chr11:62521108|62521309 hsa-miR-593-5p 0 0 1
chr11:62521108|62521309 hsa-miR-593-3p 0 0 1
chr11:62521108|62521309 hsa-miR-1228-5p 0 0 1
chr11:62521108|62521309 hsa-miR-1228-3p 0 0 1
chr11:62521108|62521309 hsa-miR-1291 0 0 1
chr11:62521108|62521309 hsa-miR-513c-5p 0 0 1
chr11:62521108|62521309 hsa-miR-513c-3p 0 0 1
chr11:62521108|62521309 hsa-miR-324-3p 0 0 1
chr11:62521108|62521309 hsa-miR-362-3p 0 0 1
chr11:62521108|62521309 hsa-miR-514 0 0 1
chr11:62521108|62521309 hsa-miR-329 0 0 1
chr11:62521108|62521309 hsa-miR-1201 0 0 1
chr11:62521108|62521309 hsa-miR-1182 1 0 0
chr11:62521108|62521309 hsa-miR-4281 1 0 0
chr11:62521108|62521309 hsa-miR-3943 1 0 0
chr11:62521108|62521309 hsa-miR-4721 1 0 0
chr11:62521108|62521309 hsa-miR-5194 1 0 0
chr11:62521108|62521309 hsa-miR-6730-5p 1 1 0
chr11:62521108|62521309 hsa-miR-3190-3p 0 1 0
chr11:62521108|62521309 hsa-miR-23a-5p 1 0 0
chr11:62521108|62521309 hsa-miR-615-5p 1 0 0
chr11:62521108|62521309 hsa-miR-5088-5p 0 1 0
chr11:62521108|62521309 hsa-miR-7850-5p 0 1 0
chr11:62521108|62521309 hsa-miR-6864-5p 0 1 0
chr11:62521108|62521309 hsa-miR-7160-3p 0 1 0
chr11:62521108|62521309 hsa-miR-6895-3p 1 1 0
chr11:62521108|62521309 hsa-miR-1296-5p 1 0 0
chr11:62521108|62521309 hsa-miR-5581-3p 0 1 0
chr11:62521108|62521309 hsa-miR-514a-3p 0 1 0
chr11:62521108|62521309 hsa-miR-6752-5p 1 0 0
chr11:62521108|62521309 hsa-miR-6851-5p 0 1 0
chr11:62521108|62521309 hsa-miR-6883-5p 1 0 0
chr11:62521108|62521309 hsa-miR-1914-3p 1 1 0
chr11:62521108|62521309 hsa-miR-6775-3p 1 0 0
chr11:62521108|62521309 hsa-miR-329-3p 0 1 0
chr11:62521108|62521309 hsa-miR-514b-3p 0 1 0
chr11:62521108|62521309 hsa-miR-302d-5p 0 1 0
chr11:62521108|62521309 hsa-miR-561-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:62521108|62521309
ORF Type ORF1
Protein Length 64
Nucleotide Length 192
Protein Sequence MTSGVSMSKLGPFMSISGPLRSPSTLGRETSTSPFTLGPFKLKSMSGMEILGALMFISGILNFG
Nucleotide Sequence TTGACATCAGGTGTGTCAATGTCCAAACTGGGGCCTTTTATGTCAATTTCAGGGCCCTTGAGATCACCTTCCACTTTGGGCAGAGAGACATCCACATCACCTTTCACTTTGGGACCCTTCAAGTTAAAGTCAATGTCAGGCATGGAGATTTTGGGGGCCTTGATGTTCATCTCTGGCATCTTGAACTTTGGA

CircID chr11:62521108|62521309
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MPEMNIKAPKISMPDIDFNLKGPKVKGDVDVSLPKVEGDLKGPEIDIKGPSLDIDTPDVNIE
Nucleotide Sequence ATGCCAGAGATGAACATCAAGGCCCCCAAAATCTCCATGCCTGACATTGACTTTAACTTGAAGGGTCCCAAAGTGAAAGGTGATGTGGATGTCTCTCTGCCCAAAGTGGAAGGTGATCTCAAGGGCCCTGAAATTGACATAAAAGGCCCCAGTTTGGACATTGACACACCTGATGTCAATATTGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites