CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62525715|62525935
Strand -
CircType exon
Host Gene ENSG00000124942.12;
Algorism CIRI2;
Sequence TTGGGCATTTTCATCTTGGGCATCTTCAGGTGCCAGTCTGGACCCTGAACATTAACATCTGGGACATCAATGTCCACTTTGGGGCCTTTGAGGTCAACTTCAGGACCTTTCAGATCTCCCTCTACCTTAGGGCCTGTAACATCCACATCTCCTTTTATTTTTGGACCTGTGAGATTCAGGTCAATATCTGGCATGGATATCTTTGGAGTCTTAAAATGCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62525715|62525935 hsa-miR-192-5p 0 0 1
chr11:62525715|62525935 hsa-miR-192-3p 0 0 1
chr11:62525715|62525935 hsa-miR-198 0 0 1
chr11:62525715|62525935 hsa-miR-208a-5p 0 0 1
chr11:62525715|62525935 hsa-miR-208a-3p 0 0 1
chr11:62525715|62525935 hsa-miR-215-5p 0 0 1
chr11:62525715|62525935 hsa-miR-215-3p 0 0 1
chr11:62525715|62525935 hsa-miR-216a-5p 0 0 1
chr11:62525715|62525935 hsa-miR-216a-3p 0 0 1
chr11:62525715|62525935 hsa-miR-488-5p 0 0 1
chr11:62525715|62525935 hsa-miR-488-3p 0 0 1
chr11:62525715|62525935 hsa-miR-520g-5p 0 0 1
chr11:62525715|62525935 hsa-miR-520g-3p 0 0 1
chr11:62525715|62525935 hsa-miR-520h 0 0 1
chr11:62525715|62525935 hsa-miR-569 0 0 1
chr11:62525715|62525935 hsa-miR-586 0 0 1
chr11:62525715|62525935 hsa-miR-631 0 0 1
chr11:62525715|62525935 hsa-miR-208b-5p 0 0 1
chr11:62525715|62525935 hsa-miR-208b-3p 0 0 1
chr11:62525715|62525935 hsa-miR-576-3p 0 0 1
chr11:62525715|62525935 hsa-miR-513a-5p 0 0 1
chr11:62525715|62525935 hsa-miR-409-3p 0 0 1
chr11:62525715|62525935 hsa-miR-342-3p 0 0 1
chr11:62525715|62525935 hsa-miR-220c 0 0 1
chr11:62525715|62525935 hsa-miR-499-5p 0 0 1
chr11:62525715|62525935 hsa-miR-365 0 0 1
chr11:62525715|62525935 hsa-miR-184 1 0 0
chr11:62525715|62525935 hsa-miR-658 1 0 0
chr11:62525715|62525935 hsa-miR-3132 1 0 0
chr11:62525715|62525935 hsa-miR-3916 1 0 0
chr11:62525715|62525935 hsa-miR-4739 1 0 0
chr11:62525715|62525935 hsa-miR-6127 1 0 0
chr11:62525715|62525935 hsa-miR-6133 1 0 0
chr11:62525715|62525935 hsa-miR-8085 1 0 0
chr11:62525715|62525935 hsa-miR-12114 1 0 0
chr11:62525715|62525935 hsa-miR-150-3p 1 0 0
chr11:62525715|62525935 hsa-miR-3150a-3p 1 0 0
chr11:62525715|62525935 hsa-miR-6799-5p 1 0 0
chr11:62525715|62525935 hsa-miR-197-5p 1 0 0
chr11:62525715|62525935 hsa-miR-6772-5p 1 0 0
chr11:62525715|62525935 hsa-miR-6760-5p 1 0 0
chr11:62525715|62525935 hsa-miR-3150b-3p 1 0 0
chr11:62525715|62525935 hsa-miR-619-3p 1 0 0
chr11:62525715|62525935 hsa-miR-1273h-5p 1 0 0
chr11:62525715|62525935 hsa-miR-6870-5p 1 0 0
chr11:62525715|62525935 hsa-miR-6743-5p 1 0 0
chr11:62525715|62525935 hsa-miR-1249-5p 1 0 0
chr11:62525715|62525935 hsa-miR-6797-5p 1 0 0
chr11:62525715|62525935 hsa-miR-7111-5p 1 0 0
chr11:62525715|62525935 hsa-miR-3689a-3p 1 0 0
chr11:62525715|62525935 hsa-miR-6735-5p 1 0 0
chr11:62525715|62525935 hsa-miR-6794-5p 1 0 0
chr11:62525715|62525935 hsa-miR-6831-5p 1 0 0
chr11:62525715|62525935 hsa-miR-939-5p 1 0 0
chr11:62525715|62525935 hsa-miR-769-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:62525715|62525935
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MSTLGPLRSTSGPFRSPSTLGPVTSTSPFIFGPVRFRSISGMDIFGVLKC
Nucleotide Sequence ATGTCCACTTTGGGGCCTTTGAGGTCAACTTCAGGACCTTTCAGATCTCCCTCTACCTTAGGGCCTGTAACATCCACATCTCCTTTTATTTTTGGACCTGTGAGATTCAGGTCAATATCTGGCATGGATATCTTTGGAGTCTTAAAATGC

CircID chr11:62525715|62525935
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MNINIWDINVHFGAFEVNFRTFQISLYLRACNIHISFYFWTCEIQVNIWHGYLWSLKMH
Nucleotide Sequence CTGAACATTAACATCTGGGACATCAATGTCCACTTTGGGGCCTTTGAGGTCAACTTCAGGACCTTTCAGATCTCCCTCTACCTTAGGGCCTGTAACATCCACATCTCCTTTTATTTTTGGACCTGTGAGATTCAGGTCAATATCTGGCATGGATATCTTTGGAGTCTTAAAATGCAT

CircID chr11:62525715|62525935
ORF Type ORF3
Protein Length 73
Nucleotide Length 219
Protein Sequence MHFKTPKISMPDIDLNLTGPKIKGDVDVTGPKVEGDLKGPEVDLKGPKVDIDVPDVNVQGPDWHLKMPKMKMP
Nucleotide Sequence ATGCATTTTAAGACTCCAAAGATATCCATGCCAGATATTGACCTGAATCTCACAGGTCCAAAAATAAAAGGAGATGTGGATGTTACAGGCCCTAAGGTAGAGGGAGATCTGAAAGGTCCTGAAGTTGACCTCAAAGGCCCCAAAGTGGACATTGATGTCCCAGATGTTAATGTTCAGGGTCCAGACTGGCACCTGAAGATGCCCAAGATGAAAATGCCC

CircID chr11:62525715|62525935
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MKLTSKAPKWTLMSQMLMFRVQTGT
Nucleotide Sequence CTGAAGTTGACCTCAAAGGCCCCAAAGTGGACATTGATGTCCCAGATGTTAATGTTCAGGGTCCAGACTGGCACCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites