CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62525888|62526049
Strand +
CircType exon
Host Gene ENSG00000124942.12;
Algorism CIRI2;
Sequence CTGCCCAAGGCTGACATTGATGTCTCAGGACCGAAAGTGGATGTTGAATGTCCCGATGTGAATATCGAAGGACCTGAAGGAAAGTGGAAAAGTCCAAAGTTTAAGATGCCAGAGATGCATTTTAAGACTCCAAAGATATCCATGCCAGATATTGACCTGAAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:62525888|62526049
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence LPKADIDVSGPKVDVECPDVNIEGPEGKWKSPKFKMPEMHFKTPKISMPDIDLN
Nucleotide Sequence CTGCCCAAGGCTGACATTGATGTCTCAGGACCGAAAGTGGATGTTGAATGTCCCGATGTGAATATCGAAGGACCTGAAGGAAAGTGGAAAAGTCCAAAGTTTAAGATGCCAGAGATGCATTTTAAGACTCCAAAGATATCCATGCCAGATATTGACCTGAAT

CircID chr11:62525888|62526049
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MKESGKVQSLRCQRCILRLQRYPCQILT
Nucleotide Sequence CTGAAGGAAAGTGGAAAAGTCCAAAGTTTAAGATGCCAGAGATGCATTTTAAGACTCCAAAGATATCCATGCCAGATATTGACCTGA

CircID chr11:62525888|62526049
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MHLWHLKLWTFPLSFRSFDIHIGTFNIHFRS
Nucleotide Sequence ATGCATCTCTGGCATCTTAAACTTTGGACTTTTCCACTTTCCTTCAGGTCCTTCGATATTCACATCGGGACATTCAACATCCACTTTCGGTCCTGA

CircID chr11:62525888|62526049
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MDIFGVLKCISGILNFGLFHFPSGPSIFTSGHSTSTFGPETSMSALG
Nucleotide Sequence ATGGATATCTTTGGAGTCTTAAAATGCATCTCTGGCATCTTAAACTTTGGACTTTTCCACTTTCCTTCAGGTCCTTCGATATTCACATCGGGACATTCAACATCCACTTTCGGTCCTGAGACATCAATGTCAGCCTTGGGC

CircID chr11:62525888|62526049
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MDFSTFLQVLRYSHRDIQHPLSVLRHQCQPWA
Nucleotide Sequence TTGGACTTTTCCACTTTCCTTCAGGTCCTTCGATATTCACATCGGGACATTCAACATCCACTTTCGGTCCTGAGACATCAATGTCAGCCTTGGGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites