CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62617157|62617321
Strand +
CircType exon
Host Gene ENSG00000149541.8;
Algorism CIRI2;
Sequence GACTGTCCCAGACACTGAGCCTGGTGCCCCGGCTGCATTGGCTGCTGGTGGAGGATGCTGAGGGTCCCACCCCGCTGGTCTCAGGGCTGCTGGCTGCCTCTGGCCTCCTCTTCACACACCTGGTGGTCCTCACGCCCAAAGCCCAGCGGCTTCGGGAGGGCGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62617157|62617321 hsa-miR-484 0 1 1
chr11:62617157|62617321 hsa-miR-585-5p 0 0 1
chr11:62617157|62617321 hsa-miR-585-3p 0 0 1
chr11:62617157|62617321 hsa-miR-608 0 0 1
chr11:62617157|62617321 hsa-miR-634 0 0 1
chr11:62617157|62617321 hsa-miR-1226-5p 0 0 1
chr11:62617157|62617321 hsa-miR-1226-3p 0 0 1
chr11:62617157|62617321 hsa-miR-1231 0 0 1
chr11:62617157|62617321 hsa-miR-1249-5p 0 0 1
chr11:62617157|62617321 hsa-miR-1249-3p 0 0 1
chr11:62617157|62617321 hsa-miR-1827 0 0 1
chr11:62617157|62617321 hsa-miR-769-5p 0 0 1
chr11:62617157|62617321 hsa-miR-1224-5p 0 1 1
chr11:62617157|62617321 hsa-miR-125a-5p 0 1 1
chr11:62617157|62617321 hsa-miR-1302 0 0 1
chr11:62617157|62617321 hsa-miR-125b 0 0 1
chr11:62617157|62617321 hsa-miR-1268 0 0 1
chr11:62617157|62617321 hsa-miR-24 0 0 1
chr11:62617157|62617321 hsa-miR-611 1 0 0
chr11:62617157|62617321 hsa-miR-663a 1 0 0
chr11:62617157|62617321 hsa-miR-762 1 0 0
chr11:62617157|62617321 hsa-miR-1291 1 0 0
chr11:62617157|62617321 hsa-miR-3137 1 0 0
chr11:62617157|62617321 hsa-miR-3138 1 0 0
chr11:62617157|62617321 hsa-miR-3147 1 0 0
chr11:62617157|62617321 hsa-miR-3154 1 0 0
chr11:62617157|62617321 hsa-miR-4324 0 1 0
chr11:62617157|62617321 hsa-miR-3911 1 0 0
chr11:62617157|62617321 hsa-miR-3937 1 0 0
chr11:62617157|62617321 hsa-miR-378g 0 1 0
chr11:62617157|62617321 hsa-miR-4651 1 0 0
chr11:62617157|62617321 hsa-miR-4688 1 1 0
chr11:62617157|62617321 hsa-miR-4689 1 0 0
chr11:62617157|62617321 hsa-miR-4706 1 0 0
chr11:62617157|62617321 hsa-miR-4751 0 1 0
chr11:62617157|62617321 hsa-miR-5090 0 1 0
chr11:62617157|62617321 hsa-miR-7976 0 1 0
chr11:62617157|62617321 hsa-miR-8089 1 0 0
chr11:62617157|62617321 hsa-miR-6747-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6765-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6825-5p 1 1 0
chr11:62617157|62617321 hsa-miR-1972 1 0 0
chr11:62617157|62617321 hsa-miR-3934-5p 1 1 0
chr11:62617157|62617321 hsa-miR-4786-5p 0 1 0
chr11:62617157|62617321 hsa-miR-3663-3p 1 0 0
chr11:62617157|62617321 hsa-miR-6089 1 1 0
chr11:62617157|62617321 hsa-miR-6880-5p 1 0 0
chr11:62617157|62617321 hsa-miR-4695-5p 1 1 0
chr11:62617157|62617321 hsa-miR-6867-5p 1 1 0
chr11:62617157|62617321 hsa-miR-4709-3p 1 1 0
chr11:62617157|62617321 hsa-miR-24-3p 0 1 0
chr11:62617157|62617321 hsa-miR-6742-5p 1 1 0
chr11:62617157|62617321 hsa-miR-6782-5p 1 0 0
chr11:62617157|62617321 hsa-miR-5008-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6858-3p 0 1 0
chr11:62617157|62617321 hsa-miR-6784-5p 0 1 0
chr11:62617157|62617321 hsa-miR-4640-5p 1 1 0
chr11:62617157|62617321 hsa-miR-1228-5p 1 0 0
chr11:62617157|62617321 hsa-miR-4733-3p 0 1 0
chr11:62617157|62617321 hsa-miR-6824-5p 1 0 0
chr11:62617157|62617321 hsa-miR-1911-3p 0 1 0
chr11:62617157|62617321 hsa-miR-744-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6801-5p 1 1 0
chr11:62617157|62617321 hsa-miR-6733-3p 0 1 0
chr11:62617157|62617321 hsa-miR-1233-5p 1 0 0
chr11:62617157|62617321 hsa-miR-4763-3p 1 0 0
chr11:62617157|62617321 hsa-miR-6769b-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6778-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6775-5p 1 1 0
chr11:62617157|62617321 hsa-miR-6737-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6743-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6752-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6756-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6803-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6851-5p 1 0 0
chr11:62617157|62617321 hsa-miR-7110-5p 1 0 0
chr11:62617157|62617321 hsa-miR-11181-3p 1 0 0
chr11:62617157|62617321 hsa-miR-6808-5p 1 0 0
chr11:62617157|62617321 hsa-miR-10396a-5p 1 0 0
chr11:62617157|62617321 hsa-miR-10396b-5p 1 0 0
chr11:62617157|62617321 hsa-miR-328-5p 1 0 0
chr11:62617157|62617321 hsa-miR-4726-5p 1 1 0
chr11:62617157|62617321 hsa-miR-4749-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6858-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6845-5p 1 0 0
chr11:62617157|62617321 hsa-miR-7843-5p 1 0 0
chr11:62617157|62617321 hsa-miR-6766-5p 0 1 0
chr11:62617157|62617321 hsa-miR-6762-5p 1 1 0
chr11:62617157|62617321 hsa-miR-6792-3p 0 1 0
chr11:62617157|62617321 hsa-miR-6775-3p 1 0 0
chr11:62617157|62617321 hsa-miR-9851-3p 0 1 0
chr11:62617157|62617321 hsa-miR-10392-3p 1 0 0
chr11:62617157|62617321 hsa-miR-4691-5p 0 1 0
chr11:62617157|62617321 hsa-miR-4676-5p 1 0 0
chr11:62617157|62617321 hsa-miR-125b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:62617157|62617321
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MLRVPPRWSQGCWLPLASSSHTWWSSRPKPSGFGRAS
Nucleotide Sequence ATGCTGAGGGTCCCACCCCGCTGGTCTCAGGGCTGCTGGCTGCCTCTGGCCTCCTCTTCACACACCTGGTGGTCCTCACGCCCAAAGCCCAGCGGCTTCGGGAGGGCGAGC
CircID chr11:62617157|62617321
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence LSQTLSLVPRLHWLLVEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGE
Nucleotide Sequence CTGTCCCAGACACTGAGCCTGGTGCCCCGGCTGCATTGGCTGCTGGTGGAGGATGCTGAGGGTCCCACCCCGCTGGTCTCAGGGCTGCTGGCTGCCTCTGGCCTCCTCTTCACACACCTGGTGGTCCTCACGCCCAAAGCCCAGCGGCTTCGGGAGGGCGAG
CircID chr11:62617157|62617321
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MRPAGWDPQHPPPAANAAGAPGSVSGTV
Nucleotide Sequence CTGAGACCAGCGGGGTGGGACCCTCAGCATCCTCCACCAGCAGCCAATGCAGCCGGGGCACCAGGCTCAGTGTCTGGGACAGTC
CircID chr11:62617157|62617321
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MGVRTTRCVKRRPEAASSPETSGVGPSASSTSSQCSRGTRLSVWDS
Nucleotide Sequence TTGGGCGTGAGGACCACCAGGTGTGTGAAGAGGAGGCCAGAGGCAGCCAGCAGCCCTGAGACCAGCGGGGTGGGACCCTCAGCATCCTCCACCAGCAGCCAATGCAGCCGGGGCACCAGGCTCAGTGTCTGGGACAGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab