CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62625457|62625625
Strand +
CircType exon
Host Gene ENSG00000089597.15;
Algorism CIRI2;
Sequence CTCTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCACATTCACTTACGAACACCAGGAAACCACAGGGCCCTTGTCGCCCCTTCTCTTTCCCTTATTTAGGAGCCCTGAACTCCCCCAGAGTCTATCCATTCATGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62625457|62625625 hsa-miR-122-5p 0 0 1
chr11:62625457|62625625 hsa-miR-122-3p 0 0 1
chr11:62625457|62625625 hsa-miR-326 0 0 1
chr11:62625457|62625625 hsa-miR-571 1 0 1
chr11:62625457|62625625 hsa-miR-625-5p 0 0 1
chr11:62625457|62625625 hsa-miR-625-3p 0 0 1
chr11:62625457|62625625 hsa-miR-637 1 0 1
chr11:62625457|62625625 hsa-miR-1291 0 0 1
chr11:62625457|62625625 hsa-miR-1257 0 0 1
chr11:62625457|62625625 hsa-miR-1265 0 0 1
chr11:62625457|62625625 hsa-miR-1275 1 0 1
chr11:62625457|62625625 hsa-miR-145-5p 0 0 1
chr11:62625457|62625625 hsa-miR-146b-3p 0 0 1
chr11:62625457|62625625 hsa-miR-330-5p 0 0 1
chr11:62625457|62625625 hsa-miR-1273 0 0 1
chr11:62625457|62625625 hsa-miR-184 1 0 0
chr11:62625457|62625625 hsa-miR-608 1 0 0
chr11:62625457|62625625 hsa-miR-663a 1 0 0
chr11:62625457|62625625 hsa-miR-1182 1 0 0
chr11:62625457|62625625 hsa-miR-3132 1 0 0
chr11:62625457|62625625 hsa-miR-3147 1 0 0
chr11:62625457|62625625 hsa-miR-3153 1 0 0
chr11:62625457|62625625 hsa-miR-3154 0 1 0
chr11:62625457|62625625 hsa-miR-3196 1 0 0
chr11:62625457|62625625 hsa-miR-4259 1 0 0
chr11:62625457|62625625 hsa-miR-4270 1 0 0
chr11:62625457|62625625 hsa-miR-4271 1 0 0
chr11:62625457|62625625 hsa-miR-4437 1 0 0
chr11:62625457|62625625 hsa-miR-2392 1 0 0
chr11:62625457|62625625 hsa-miR-4507 1 0 0
chr11:62625457|62625625 hsa-miR-4525 1 0 0
chr11:62625457|62625625 hsa-miR-4688 1 0 0
chr11:62625457|62625625 hsa-miR-4721 1 0 0
chr11:62625457|62625625 hsa-miR-5572 1 0 0
chr11:62625457|62625625 hsa-miR-5698 1 0 0
chr11:62625457|62625625 hsa-miR-5739 1 0 0
chr11:62625457|62625625 hsa-miR-6086 1 0 0
chr11:62625457|62625625 hsa-miR-6090 1 0 0
chr11:62625457|62625625 hsa-miR-6124 1 0 0
chr11:62625457|62625625 hsa-miR-6127 1 0 0
chr11:62625457|62625625 hsa-miR-6165 1 0 0
chr11:62625457|62625625 hsa-miR-7515 1 0 0
chr11:62625457|62625625 hsa-miR-8085 1 0 0
chr11:62625457|62625625 hsa-miR-8089 1 0 0
chr11:62625457|62625625 hsa-miR-4433b-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6734-5p 1 0 0
chr11:62625457|62625625 hsa-miR-504-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6747-5p 1 0 0
chr11:62625457|62625625 hsa-miR-3150a-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6861-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6894-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4687-3p 1 0 0
chr11:62625457|62625625 hsa-miR-29b-2-5p 0 1 0
chr11:62625457|62625625 hsa-miR-5187-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6873-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4653-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6727-5p 1 0 0
chr11:62625457|62625625 hsa-miR-197-5p 1 0 0
chr11:62625457|62625625 hsa-miR-7845-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6716-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6772-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6793-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6829-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6805-5p 1 0 0
chr11:62625457|62625625 hsa-miR-23a-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6798-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6760-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6881-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6782-5p 1 0 0
chr11:62625457|62625625 hsa-miR-5088-5p 1 0 0
chr11:62625457|62625625 hsa-miR-7109-5p 1 0 0
chr11:62625457|62625625 hsa-miR-1226-5p 1 0 0
chr11:62625457|62625625 hsa-miR-1229-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6784-5p 1 0 0
chr11:62625457|62625625 hsa-miR-3127-5p 1 0 0
chr11:62625457|62625625 hsa-miR-296-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6823-5p 1 0 0
chr11:62625457|62625625 hsa-miR-3202 1 0 0
chr11:62625457|62625625 hsa-miR-6834-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4446-3p 1 0 0
chr11:62625457|62625625 hsa-miR-149-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6824-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6789-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4715-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6892-5p 1 0 0
chr11:62625457|62625625 hsa-miR-5010-5p 1 0 0
chr11:62625457|62625625 hsa-miR-5584-5p 0 1 0
chr11:62625457|62625625 hsa-miR-7160-3p 0 1 0
chr11:62625457|62625625 hsa-miR-5000-5p 0 1 0
chr11:62625457|62625625 hsa-miR-3179 0 1 0
chr11:62625457|62625625 hsa-miR-6812-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6816-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6870-5p 1 0 0
chr11:62625457|62625625 hsa-miR-1343-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6743-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6752-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6769a-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6803-5p 1 0 0
chr11:62625457|62625625 hsa-miR-7110-5p 1 0 0
chr11:62625457|62625625 hsa-miR-1249-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6751-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6763-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6788-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6797-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6879-5p 1 0 0
chr11:62625457|62625625 hsa-miR-7111-5p 1 0 0
chr11:62625457|62625625 hsa-miR-5196-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6780b-5p 1 0 0
chr11:62625457|62625625 hsa-miR-1237-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4685-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4725-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6777-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6795-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6846-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6848-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6858-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6887-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6889-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4723-5p 1 0 0
chr11:62625457|62625625 hsa-miR-939-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4758-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4769-5p 1 0 0
chr11:62625457|62625625 hsa-miR-30c-1-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6731-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6739-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6856-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4665-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4747-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6891-5p 1 0 0
chr11:62625457|62625625 hsa-miR-4716-3p 1 0 0
chr11:62625457|62625625 hsa-miR-6849-5p 1 0 0
chr11:62625457|62625625 hsa-miR-6822-5p 1 0 0
chr11:62625457|62625625 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:62625457|62625625
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MDRLWGSSGLLNKGKRRGDKGPVVSWCS
Nucleotide Sequence ATGGATAGACTCTGGGGGAGTTCAGGGCTCCTAAATAAGGGAAAGAGAAGGGGCGACAAGGGCCCTGTGGTTTCCTGGTGTTCGTAA
CircID chr11:62625457|62625625
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MVFVSECAPVRATGCWGNEGKELVSMEWE
Nucleotide Sequence CTGGTGTTCGTAAGTGAATGTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab