CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62626101|62626408
Strand +
CircType exon
Host Gene ENSG00000089597.15;
Algorism CIRI2;
Sequence ACGTTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGTCGATTCTCATTCTCTGGCAACACCCTTGTCTCCAGGTAATGGGTCACCCACTCTTCCTTGGCTGCCTTTGCTGGGGCCTGATCCTTGTGGGGGCTCCCAGTTCACTGTGCTCTTTTCTCACATTCTGACCTTGCTTTGGGTCTCCTCCTTCCTTCTGTTCTGTTATTTTTCCCCCTGATGGACATCTGCTTTTACCATCTCCAGCTCAGCAGACCCTGAAGGACACTTTGAGACACCAATCTGGATTGAGCGGGTGGTGATAATAGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62626101|62626408 hsa-miR-197-5p 0 0 1
chr11:62626101|62626408 hsa-miR-197-3p 0 0 1
chr11:62626101|62626408 hsa-miR-205-5p 0 0 1
chr11:62626101|62626408 hsa-miR-205-3p 0 0 1
chr11:62626101|62626408 hsa-miR-214-5p 0 0 1
chr11:62626101|62626408 hsa-miR-214-3p 0 0 1
chr11:62626101|62626408 hsa-miR-520g-5p 0 0 1
chr11:62626101|62626408 hsa-miR-520g-3p 0 0 1
chr11:62626101|62626408 hsa-miR-520h 0 1 1
chr11:62626101|62626408 hsa-miR-539-5p 0 0 1
chr11:62626101|62626408 hsa-miR-539-3p 0 0 1
chr11:62626101|62626408 hsa-miR-545-5p 0 0 1
chr11:62626101|62626408 hsa-miR-545-3p 0 0 1
chr11:62626101|62626408 hsa-miR-558 0 0 1
chr11:62626101|62626408 hsa-miR-580-5p 0 0 1
chr11:62626101|62626408 hsa-miR-580-3p 0 0 1
chr11:62626101|62626408 hsa-miR-609 0 0 1
chr11:62626101|62626408 hsa-miR-619-5p 0 0 1
chr11:62626101|62626408 hsa-miR-619-3p 0 0 1
chr11:62626101|62626408 hsa-miR-620 0 0 1
chr11:62626101|62626408 hsa-miR-625-5p 0 0 1
chr11:62626101|62626408 hsa-miR-625-3p 0 0 1
chr11:62626101|62626408 hsa-miR-660-5p 0 0 1
chr11:62626101|62626408 hsa-miR-660-3p 0 0 1
chr11:62626101|62626408 hsa-miR-765 0 1 1
chr11:62626101|62626408 hsa-miR-887-5p 0 0 1
chr11:62626101|62626408 hsa-miR-887-3p 0 0 1
chr11:62626101|62626408 hsa-miR-873-5p 0 0 1
chr11:62626101|62626408 hsa-miR-873-3p 0 0 1
chr11:62626101|62626408 hsa-miR-920 0 0 1
chr11:62626101|62626408 hsa-miR-1182 0 1 1
chr11:62626101|62626408 hsa-miR-1202 0 0 1
chr11:62626101|62626408 hsa-miR-1262 0 0 1
chr11:62626101|62626408 hsa-miR-1270 0 1 1
chr11:62626101|62626408 hsa-miR-1276 0 0 1
chr11:62626101|62626408 hsa-miR-1252-5p 0 0 1
chr11:62626101|62626408 hsa-miR-1252-3p 0 0 1
chr11:62626101|62626408 hsa-miR-1225-3p 0 0 1
chr11:62626101|62626408 hsa-miR-330-3p 0 0 1
chr11:62626101|62626408 hsa-miR-509-3p 0 0 1
chr11:62626101|62626408 hsa-miR-885-5p 0 0 1
chr11:62626101|62626408 hsa-miR-220b 0 0 1
chr11:62626101|62626408 hsa-miR-371-5p 0 0 1
chr11:62626101|62626408 hsa-miR-128 0 0 1
chr11:62626101|62626408 hsa-miR-637 1 0 0
chr11:62626101|62626408 hsa-miR-298 1 1 0
chr11:62626101|62626408 hsa-miR-665 1 0 0
chr11:62626101|62626408 hsa-miR-3714 1 0 0
chr11:62626101|62626408 hsa-miR-3909 1 0 0
chr11:62626101|62626408 hsa-miR-4515 1 0 0
chr11:62626101|62626408 hsa-miR-4533 1 1 0
chr11:62626101|62626408 hsa-miR-4663 0 1 0
chr11:62626101|62626408 hsa-miR-4686 1 0 0
chr11:62626101|62626408 hsa-miR-4689 1 0 0
chr11:62626101|62626408 hsa-miR-4739 1 1 0
chr11:62626101|62626408 hsa-miR-5100 1 0 0
chr11:62626101|62626408 hsa-miR-6124 1 0 0
chr11:62626101|62626408 hsa-miR-8089 1 1 0
chr11:62626101|62626408 hsa-miR-9500 0 1 0
chr11:62626101|62626408 hsa-miR-12118 0 1 0
chr11:62626101|62626408 hsa-miR-128-3p 0 1 0
chr11:62626101|62626408 hsa-miR-93-3p 0 1 0
chr11:62626101|62626408 hsa-miR-3150a-3p 1 0 0
chr11:62626101|62626408 hsa-miR-7106-5p 1 1 0
chr11:62626101|62626408 hsa-miR-6894-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6510-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6728-5p 1 0 0
chr11:62626101|62626408 hsa-miR-3692-5p 0 1 0
chr11:62626101|62626408 hsa-miR-6804-5p 1 0 0
chr11:62626101|62626408 hsa-miR-4768-3p 0 1 0
chr11:62626101|62626408 hsa-miR-4695-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6746-5p 1 0 0
chr11:62626101|62626408 hsa-miR-4653-3p 1 0 0
chr11:62626101|62626408 hsa-miR-874-5p 1 1 0
chr11:62626101|62626408 hsa-miR-1178-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6829-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6827-5p 0 1 0
chr11:62626101|62626408 hsa-miR-6798-5p 1 0 0
chr11:62626101|62626408 hsa-miR-2467-3p 1 0 0
chr11:62626101|62626408 hsa-miR-3150b-3p 1 1 0
chr11:62626101|62626408 hsa-miR-6888-5p 0 1 0
chr11:62626101|62626408 hsa-miR-5008-5p 1 0 0
chr11:62626101|62626408 hsa-miR-7109-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6501-5p 0 1 0
chr11:62626101|62626408 hsa-miR-193a-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6830-5p 0 1 0
chr11:62626101|62626408 hsa-miR-516b-5p 0 1 0
chr11:62626101|62626408 hsa-miR-5010-5p 1 0 0
chr11:62626101|62626408 hsa-miR-3922-5p 1 0 0
chr11:62626101|62626408 hsa-miR-4707-5p 1 0 0
chr11:62626101|62626408 hsa-miR-4773 0 1 0
chr11:62626101|62626408 hsa-miR-6818-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6801-5p 1 1 0
chr11:62626101|62626408 hsa-miR-216a-3p 0 1 0
chr11:62626101|62626408 hsa-miR-4680-5p 0 1 0
chr11:62626101|62626408 hsa-miR-6743-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6756-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6851-5p 1 0 0
chr11:62626101|62626408 hsa-miR-11181-3p 1 0 0
chr11:62626101|62626408 hsa-miR-1249-5p 1 1 0
chr11:62626101|62626408 hsa-miR-6797-5p 1 1 0
chr11:62626101|62626408 hsa-miR-6808-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6879-5p 1 0 0
chr11:62626101|62626408 hsa-miR-7111-5p 1 1 0
chr11:62626101|62626408 hsa-miR-6780b-5p 1 0 0
chr11:62626101|62626408 hsa-miR-10526-3p 1 0 0
chr11:62626101|62626408 hsa-miR-1909-3p 1 0 0
chr11:62626101|62626408 hsa-miR-328-5p 1 0 0
chr11:62626101|62626408 hsa-miR-4632-5p 1 0 0
chr11:62626101|62626408 hsa-miR-4745-5p 0 1 0
chr11:62626101|62626408 hsa-miR-6735-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6795-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6858-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6887-5p 1 0 0
chr11:62626101|62626408 hsa-miR-4436b-3p 1 0 0
chr11:62626101|62626408 hsa-miR-4723-5p 1 1 0
chr11:62626101|62626408 hsa-miR-6511a-5p 1 0 0
chr11:62626101|62626408 hsa-miR-6739-5p 0 1 0
chr11:62626101|62626408 hsa-miR-4700-5p 0 1 0
chr11:62626101|62626408 hsa-miR-3173-3p 0 1 0
chr11:62626101|62626408 hsa-miR-6876-5p 0 1 0
chr11:62626101|62626408 hsa-miR-4716-3p 1 1 0
chr11:62626101|62626408 hsa-miR-9851-3p 1 0 0
chr11:62626101|62626408 hsa-miR-3619-5p 0 1 0
chr11:62626101|62626408 hsa-miR-1912-3p 1 1 0
chr11:62626101|62626408 hsa-miR-556-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:62626101|62626408
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MWGLPVHCALFSHSDLALGLLLPSVLLFFPLMDICFYHLQLSRP
Nucleotide Sequence TTGTGGGGGCTCCCAGTTCACTGTGCTCTTTTCTCACATTCTGACCTTGCTTTGGGTCTCCTCCTTCCTTCTGTTCTGTTATTTTTCCCCCTGATGGACATCTGCTTTTACCATCTCCAGCTCAGCAGACCCTGA
CircID chr11:62626101|62626408
ORF Type ORF2
Protein Length 54
Nucleotide Length 165
Protein Sequence MATPLSPGNGSPTLPWLPLLGPDPCGGSQFTVLFSHILTLLWVSSFLLFCYFSP
Nucleotide Sequence CTGGCAACACCCTTGTCTCCAGGTAATGGGTCACCCACTCTTCCTTGGCTGCCTTTGCTGGGGCCTGATCCTTGTGGGGGCTCCCAGTTCACTGTGCTCTTTTCTCACATTCTGACCTTGCTTTGGGTCTCCTCCTTCCTTCTGTTCTGTTATTTTTCCCCCTGA
CircID chr11:62626101|62626408
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MGHPLFLGCLCWGLILVGAPSSLCSFLTF
Nucleotide Sequence ATGGGTCACCCACTCTTCCTTGGCTGCCTTTGCTGGGGCCTGATCCTTGTGGGGGCTCCCAGTTCACTGTGCTCTTTTCTCACATTCTGA
CircID chr11:62626101|62626408
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MSIRGKNNRTEGRRRPKARSECEKRAQ
Nucleotide Sequence ATGTCCATCAGGGGGAAAAATAACAGAACAGAAGGAAGGAGGAGACCCAAAGCAAGGTCAGAATGTGAGAAAAGAGCACAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab