CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62629125|62629248
Strand -
CircType exon
Host Gene ENSG00000089597.15;
Algorism CIRI2;
Sequence CTTGGTCCTGTGCCCTCTACTTTGCCCCTTTCCCACCAAACCAAGACCCCAAATTCCTCCCTGTCTTACCCCCACAGAAGGAAAGTCCCACCAGCCCCAAGCTGAGACACATAGGAATAGAGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62629125|62629248 hsa-miR-555 0 0 1
chr11:62629125|62629248 hsa-miR-641 0 0 1
chr11:62629125|62629248 hsa-miR-541-5p 0 0 1
chr11:62629125|62629248 hsa-miR-541-3p 0 0 1
chr11:62629125|62629248 hsa-miR-1237-5p 0 0 1
chr11:62629125|62629248 hsa-miR-1237-3p 0 0 1
chr11:62629125|62629248 hsa-miR-1248 0 0 1
chr11:62629125|62629248 hsa-miR-1321 0 0 1
chr11:62629125|62629248 hsa-miR-491-5p 0 0 1
chr11:62629125|62629248 hsa-miR-615-5p 1 0 1
chr11:62629125|62629248 hsa-miR-193a-5p 1 0 1
chr11:62629125|62629248 hsa-miR-654-5p 0 0 1
chr11:62629125|62629248 hsa-miR-337-3p 0 0 1
chr11:62629125|62629248 hsa-miR-138 0 0 1
chr11:62629125|62629248 hsa-miR-601 1 0 0
chr11:62629125|62629248 hsa-miR-608 1 0 0
chr11:62629125|62629248 hsa-miR-762 1 0 0
chr11:62629125|62629248 hsa-miR-1182 1 0 0
chr11:62629125|62629248 hsa-miR-3153 1 1 0
chr11:62629125|62629248 hsa-miR-3154 1 0 0
chr11:62629125|62629248 hsa-miR-3175 1 0 0
chr11:62629125|62629248 hsa-miR-4298 1 0 0
chr11:62629125|62629248 hsa-miR-4270 1 0 0
chr11:62629125|62629248 hsa-miR-4271 1 0 0
chr11:62629125|62629248 hsa-miR-3945 1 1 0
chr11:62629125|62629248 hsa-miR-4441 1 1 0
chr11:62629125|62629248 hsa-miR-4450 1 0 0
chr11:62629125|62629248 hsa-miR-4456 0 1 0
chr11:62629125|62629248 hsa-miR-4462 1 0 0
chr11:62629125|62629248 hsa-miR-4498 0 1 0
chr11:62629125|62629248 hsa-miR-4505 1 0 0
chr11:62629125|62629248 hsa-miR-4514 1 0 0
chr11:62629125|62629248 hsa-miR-4516 1 0 0
chr11:62629125|62629248 hsa-miR-4538 0 1 0
chr11:62629125|62629248 hsa-miR-4648 1 0 0
chr11:62629125|62629248 hsa-miR-4654 1 0 0
chr11:62629125|62629248 hsa-miR-4656 1 0 0
chr11:62629125|62629248 hsa-miR-4688 1 1 0
chr11:62629125|62629248 hsa-miR-4739 1 0 0
chr11:62629125|62629248 hsa-miR-4741 1 0 0
chr11:62629125|62629248 hsa-miR-5572 1 0 0
chr11:62629125|62629248 hsa-miR-5787 1 0 0
chr11:62629125|62629248 hsa-miR-6085 1 0 0
chr11:62629125|62629248 hsa-miR-6090 1 0 0
chr11:62629125|62629248 hsa-miR-6124 1 0 0
chr11:62629125|62629248 hsa-miR-6127 1 0 0
chr11:62629125|62629248 hsa-miR-6133 1 1 0
chr11:62629125|62629248 hsa-miR-6745 1 0 0
chr11:62629125|62629248 hsa-miR-7150 1 0 0
chr11:62629125|62629248 hsa-miR-7704 1 0 0
chr11:62629125|62629248 hsa-miR-8085 1 0 0
chr11:62629125|62629248 hsa-miR-10226 0 1 0
chr11:62629125|62629248 hsa-miR-12119 1 0 0
chr11:62629125|62629248 hsa-miR-7155-5p 1 0 0
chr11:62629125|62629248 hsa-miR-7106-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6825-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6894-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6857-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4687-3p 1 0 0
chr11:62629125|62629248 hsa-miR-6799-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6728-5p 1 0 0
chr11:62629125|62629248 hsa-miR-766-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6890-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6721-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6716-5p 1 0 0
chr11:62629125|62629248 hsa-miR-3151-5p 1 0 0
chr11:62629125|62629248 hsa-miR-1292-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6796-5p 1 1 0
chr11:62629125|62629248 hsa-miR-185-3p 1 1 0
chr11:62629125|62629248 hsa-miR-3190-3p 1 0 0
chr11:62629125|62629248 hsa-miR-6805-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6798-5p 1 0 0
chr11:62629125|62629248 hsa-miR-486-3p 1 0 0
chr11:62629125|62629248 hsa-miR-6881-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6835-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6740-5p 1 0 0
chr11:62629125|62629248 hsa-miR-1229-5p 1 0 0
chr11:62629125|62629248 hsa-miR-193b-5p 1 0 0
chr11:62629125|62629248 hsa-miR-1908-5p 1 0 0
chr11:62629125|62629248 hsa-miR-296-3p 1 0 0
chr11:62629125|62629248 hsa-miR-92b-5p 1 0 0
chr11:62629125|62629248 hsa-miR-149-3p 1 0 0
chr11:62629125|62629248 hsa-miR-937-5p 1 0 0
chr11:62629125|62629248 hsa-miR-3162-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6802-5p 1 0 0
chr11:62629125|62629248 hsa-miR-3189-3p 0 1 0
chr11:62629125|62629248 hsa-miR-3678-3p 1 0 0
chr11:62629125|62629248 hsa-miR-423-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4727-3p 1 0 0
chr11:62629125|62629248 hsa-miR-483-5p 1 0 0
chr11:62629125|62629248 hsa-miR-584-5p 1 0 0
chr11:62629125|62629248 hsa-miR-1207-5p 1 0 0
chr11:62629125|62629248 hsa-miR-1233-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4763-3p 1 0 0
chr11:62629125|62629248 hsa-miR-6769b-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6778-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6812-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6865-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6870-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6737-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6743-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6752-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6754-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6769a-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6803-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6813-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6819-5p 1 0 0
chr11:62629125|62629248 hsa-miR-7110-5p 1 0 0
chr11:62629125|62629248 hsa-miR-1249-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6751-5p 1 1 0
chr11:62629125|62629248 hsa-miR-6774-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6788-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6797-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6808-5p 1 0 0
chr11:62629125|62629248 hsa-miR-7111-5p 1 0 0
chr11:62629125|62629248 hsa-miR-3620-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4728-5p 1 0 0
chr11:62629125|62629248 hsa-miR-5196-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6780b-5p 1 0 0
chr11:62629125|62629248 hsa-miR-10526-3p 1 1 0
chr11:62629125|62629248 hsa-miR-1909-3p 1 0 0
chr11:62629125|62629248 hsa-miR-328-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4649-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4725-3p 1 0 0
chr11:62629125|62629248 hsa-miR-4745-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6729-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6735-5p 1 0 0
chr11:62629125|62629248 hsa-miR-675-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6777-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6846-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6848-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6883-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6887-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6889-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4769-5p 1 0 0
chr11:62629125|62629248 hsa-miR-365a-5p 1 0 0
chr11:62629125|62629248 hsa-miR-365b-5p 0 1 0
chr11:62629125|62629248 hsa-miR-30c-1-3p 1 0 0
chr11:62629125|62629248 hsa-miR-6731-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6758-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6736-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6855-5p 1 0 0
chr11:62629125|62629248 hsa-miR-4747-5p 1 0 0
chr11:62629125|62629248 hsa-miR-6785-5p 1 0 0
chr11:62629125|62629248 hsa-miR-3184-5p 1 0 0
chr11:62629125|62629248 hsa-miR-769-3p 1 0 0
chr11:62629125|62629248 hsa-miR-6733-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:62629125|62629248
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MPLSHQTKTPNSSLSYPHRRKVPPAPS
Nucleotide Sequence TTGCCCCTTTCCCACCAAACCAAGACCCCAAATTCCTCCCTGTCTTACCCCCACAGAAGGAAAGTCCCACCAGCCCCAAGCTGA
CircID chr11:62629125|62629248
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence LVLCPLLCPFPTKPRPQIPPCLTPTEGKSHQPQAETHRNRD
Nucleotide Sequence TTGGTCCTGTGCCCTCTACTTTGCCCCTTTCCCACCAAACCAAGACCCCAAATTCCTCCCTGTCTTACCCCCACAGAAGGAAAGTCCCACCAGCCCCAAGCTGAGACACATAGGAATAGAGAT
CircID chr11:62629125|62629248
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MCLSLGLVGLSFCGGKTGRNLGSWFGGKGAK
Nucleotide Sequence ATGTGTCTCAGCTTGGGGCTGGTGGGACTTTCCTTCTGTGGGGGTAAGACAGGGAGGAATTTGGGGTCTTGGTTTGGTGGGAAAGGGGCAAAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab