CircRNA Information

General Information
circRNA Basic Information
CircID chr11:62677529|62677805
Strand -
CircType exon
Host Gene ENSG00000162191.12;
Algorism CIRI2;
Sequence ACTGGTCATACTCCCGCTTGGTGGGAGGCTCCTGGCTGGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTGGCTGAGAGCCCACACTGCCACCATACTAAAGGGCAAAGTAAAACAGTCAATCAGGTACTCACCCATCCTCAGGTGAAACAGATCATATAAGCCCATGCTTTCCCTCTGAAGCTGGAAAAGATTTACTAACCTGCCCACTCCATTACCCGTGGCGTCTTCTCAGTCACCTACCTTCTTGGCTCTCTCTGCTTTGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:62677529|62677805 hsa-miR-34a-5p 0 0 1
chr11:62677529|62677805 hsa-miR-34a-3p 0 0 1
chr11:62677529|62677805 hsa-miR-122-5p 0 0 1
chr11:62677529|62677805 hsa-miR-122-3p 0 0 1
chr11:62677529|62677805 hsa-miR-134-5p 0 0 1
chr11:62677529|62677805 hsa-miR-134-3p 0 0 1
chr11:62677529|62677805 hsa-miR-150-5p 0 0 1
chr11:62677529|62677805 hsa-miR-150-3p 0 0 1
chr11:62677529|62677805 hsa-miR-449a 0 1 1
chr11:62677529|62677805 hsa-miR-452-5p 0 0 1
chr11:62677529|62677805 hsa-miR-452-3p 0 0 1
chr11:62677529|62677805 hsa-miR-449b-5p 0 0 1
chr11:62677529|62677805 hsa-miR-449b-3p 0 0 1
chr11:62677529|62677805 hsa-miR-657 0 0 1
chr11:62677529|62677805 hsa-miR-874-5p 0 0 1
chr11:62677529|62677805 hsa-miR-874-3p 0 0 1
chr11:62677529|62677805 hsa-miR-665 0 0 1
chr11:62677529|62677805 hsa-miR-938 0 0 1
chr11:62677529|62677805 hsa-miR-942-5p 0 0 1
chr11:62677529|62677805 hsa-miR-942-3p 0 0 1
chr11:62677529|62677805 hsa-miR-943 0 0 1
chr11:62677529|62677805 hsa-miR-1253 0 0 1
chr11:62677529|62677805 hsa-miR-1262 0 0 1
chr11:62677529|62677805 hsa-miR-532-3p 0 0 1
chr11:62677529|62677805 hsa-miR-330-3p 0 0 1
chr11:62677529|62677805 hsa-miR-361-3p 0 0 1
chr11:62677529|62677805 hsa-miR-1224-3p 0 0 1
chr11:62677529|62677805 hsa-miR-34c-5p 0 0 1
chr11:62677529|62677805 hsa-miR-1260 0 0 1
chr11:62677529|62677805 hsa-miR-1280 0 0 1
chr11:62677529|62677805 hsa-miR-642 0 0 1
chr11:62677529|62677805 hsa-miR-1300 0 0 1
chr11:62677529|62677805 hsa-miR-1185 0 0 1
chr11:62677529|62677805 hsa-miR-1259 0 0 1
chr11:62677529|62677805 hsa-miR-608 1 0 0
chr11:62677529|62677805 hsa-miR-612 1 0 0
chr11:62677529|62677805 hsa-miR-1202 1 0 0
chr11:62677529|62677805 hsa-miR-1276 1 0 0
chr11:62677529|62677805 hsa-miR-3132 1 0 0
chr11:62677529|62677805 hsa-miR-544b 0 1 0
chr11:62677529|62677805 hsa-miR-3138 1 0 0
chr11:62677529|62677805 hsa-miR-3141 1 0 0
chr11:62677529|62677805 hsa-miR-3147 1 0 0
chr11:62677529|62677805 hsa-miR-4296 0 1 0
chr11:62677529|62677805 hsa-miR-4302 0 1 0
chr11:62677529|62677805 hsa-miR-4322 0 1 0
chr11:62677529|62677805 hsa-miR-4265 0 1 0
chr11:62677529|62677805 hsa-miR-4458 1 0 0
chr11:62677529|62677805 hsa-miR-4481 1 1 0
chr11:62677529|62677805 hsa-miR-4488 1 0 0
chr11:62677529|62677805 hsa-miR-2392 0 1 0
chr11:62677529|62677805 hsa-miR-4507 1 0 0
chr11:62677529|62677805 hsa-miR-4510 1 0 0
chr11:62677529|62677805 hsa-miR-1587 1 0 0
chr11:62677529|62677805 hsa-miR-4537 1 0 0
chr11:62677529|62677805 hsa-miR-4644 1 0 0
chr11:62677529|62677805 hsa-miR-4647 1 0 0
chr11:62677529|62677805 hsa-miR-4651 1 0 0
chr11:62677529|62677805 hsa-miR-4673 1 0 0
chr11:62677529|62677805 hsa-miR-4689 1 0 0
chr11:62677529|62677805 hsa-miR-4736 1 0 0
chr11:62677529|62677805 hsa-miR-4784 1 0 0
chr11:62677529|62677805 hsa-miR-5698 1 0 0
chr11:62677529|62677805 hsa-miR-6090 1 0 0
chr11:62677529|62677805 hsa-miR-6127 1 0 0
chr11:62677529|62677805 hsa-miR-6133 1 0 0
chr11:62677529|62677805 hsa-miR-6860 1 0 0
chr11:62677529|62677805 hsa-miR-7977 0 1 0
chr11:62677529|62677805 hsa-miR-8072 1 0 0
chr11:62677529|62677805 hsa-miR-8085 1 0 0
chr11:62677529|62677805 hsa-miR-12115 1 0 0
chr11:62677529|62677805 hsa-miR-4433b-3p 1 0 0
chr11:62677529|62677805 hsa-miR-504-3p 1 0 0
chr11:62677529|62677805 hsa-miR-3157-5p 0 1 0
chr11:62677529|62677805 hsa-miR-6861-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6825-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6894-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6857-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6510-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6728-5p 1 0 0
chr11:62677529|62677805 hsa-miR-139-3p 1 0 0
chr11:62677529|62677805 hsa-miR-6873-5p 1 1 0
chr11:62677529|62677805 hsa-miR-505-5p 1 1 0
chr11:62677529|62677805 hsa-miR-593-5p 1 1 0
chr11:62677529|62677805 hsa-miR-6890-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6721-5p 1 0 0
chr11:62677529|62677805 hsa-miR-197-5p 1 0 0
chr11:62677529|62677805 hsa-miR-3605-5p 0 1 0
chr11:62677529|62677805 hsa-miR-6716-5p 1 0 0
chr11:62677529|62677805 hsa-miR-877-3p 1 1 0
chr11:62677529|62677805 hsa-miR-6732-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6827-5p 1 1 0
chr11:62677529|62677805 hsa-miR-6798-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6782-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6514-5p 1 1 0
chr11:62677529|62677805 hsa-miR-4713-5p 0 1 0
chr11:62677529|62677805 hsa-miR-1229-5p 1 0 0
chr11:62677529|62677805 hsa-miR-1228-5p 1 0 0
chr11:62677529|62677805 hsa-miR-877-5p 1 0 0
chr11:62677529|62677805 hsa-miR-642b-5p 0 1 0
chr11:62677529|62677805 hsa-miR-7111-3p 1 0 0
chr11:62677529|62677805 hsa-miR-3648 1 0 0
chr11:62677529|62677805 hsa-miR-6824-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6800-5p 0 1 0
chr11:62677529|62677805 hsa-miR-7112-5p 1 0 0
chr11:62677529|62677805 hsa-miR-1225-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6499-3p 0 1 0
chr11:62677529|62677805 hsa-miR-873-3p 1 0 0
chr11:62677529|62677805 hsa-miR-629-3p 0 1 0
chr11:62677529|62677805 hsa-miR-2114-3p 0 1 0
chr11:62677529|62677805 hsa-miR-6851-3p 1 0 0
chr11:62677529|62677805 hsa-miR-1911-5p 0 1 0
chr11:62677529|62677805 hsa-miR-652-3p 1 0 0
chr11:62677529|62677805 hsa-miR-1207-5p 1 0 0
chr11:62677529|62677805 hsa-miR-4763-3p 1 0 0
chr11:62677529|62677805 hsa-miR-6769b-5p 1 1 0
chr11:62677529|62677805 hsa-miR-6812-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6816-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6865-5p 0 1 0
chr11:62677529|62677805 hsa-miR-6893-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6737-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6754-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6756-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6769a-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6815-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6819-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6842-5p 1 0 0
chr11:62677529|62677805 hsa-miR-1249-5p 1 1 0
chr11:62677529|62677805 hsa-miR-6875-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6879-5p 1 0 0
chr11:62677529|62677805 hsa-miR-3620-5p 1 0 0
chr11:62677529|62677805 hsa-miR-328-5p 1 0 0
chr11:62677529|62677805 hsa-miR-4745-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6848-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6858-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6831-5p 1 0 0
chr11:62677529|62677805 hsa-miR-4758-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6731-5p 1 1 0
chr11:62677529|62677805 hsa-miR-6758-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6856-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6736-5p 0 1 0
chr11:62677529|62677805 hsa-miR-3116 1 0 0
chr11:62677529|62677805 hsa-miR-6766-5p 1 1 0
chr11:62677529|62677805 hsa-miR-6849-5p 1 0 0
chr11:62677529|62677805 hsa-miR-6805-3p 1 0 0
chr11:62677529|62677805 hsa-miR-10400-3p 0 1 0
chr11:62677529|62677805 hsa-miR-9851-3p 0 1 0
chr11:62677529|62677805 hsa-miR-708-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:62677529|62677805
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MALVPLGVAESPHCHHTKGQSKTVNQVLTHPQVKQII
Nucleotide Sequence CTGGCTCTGGTGCCACTGGGGGTGGCTGAGAGCCCACACTGCCACCATACTAAAGGGCAAAGTAAAACAGTCAATCAGGTACTCACCCATCCTCAGGTGAAACAGATCATATAA
CircID chr11:62677529|62677805
ORF Type ORF2
Protein Length 51
Nucleotide Length 156
Protein Sequence LVILPLGGRLLAGRRGNRTWLWCHWGWLRAHTATILKGKVKQSIRYSPILR
Nucleotide Sequence CTGGTCATACTCCCGCTTGGTGGGAGGCTCCTGGCTGGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTGGCTGAGAGCCCACACTGCCACCATACTAAAGGGCAAAGTAAAACAGTCAATCAGGTACTCACCCATCCTCAGGTGA
CircID chr11:62677529|62677805
ORF Type ORF3
Protein Length 59
Nucleotide Length 177
Protein Sequence MGLYDLFHLRMGEYLIDCFTLPFSMVAVWALSHPQWHQSQVLFPLLPARSLPPSGSMTS
Nucleotide Sequence ATGGGCTTATATGATCTGTTTCACCTGAGGATGGGTGAGTACCTGATTGACTGTTTTACTTTGCCCTTTAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGT
CircID chr11:62677529|62677805
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MTVLLCPLVWWQCGLSATPSGTRARSCSLFSQPGASHQAGV
Nucleotide Sequence TTGACTGTTTTACTTTGCCCTTTAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab