CircRNA Information

General Information
circRNA Basic Information
CircID chr11:63825244|63825435
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTCCCCCCACATCCCGCTCCCCGCACAGGCACTGGCCTTGCTGTTCCTGGGGAAGCCAGCGTGCTCCACCAGGGCATCCACATTTGCTCCTCCCTCTGCTCAAAATGCTGTTCCCTCCCTGTCTGCCTCACTGGCTCCTCACTCCCTCTGTGTCTGTGGTCCCCTGTCAGCTTTCTGCTATCCTATTATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:63825244|63825435 hsa-miR-320a-5p 0 0 1
chr11:63825244|63825435 hsa-miR-320a-3p 0 0 1
chr11:63825244|63825435 hsa-miR-519e-5p 0 0 1
chr11:63825244|63825435 hsa-miR-519e-3p 0 0 1
chr11:63825244|63825435 hsa-miR-575 1 0 1
chr11:63825244|63825435 hsa-miR-765 0 0 1
chr11:63825244|63825435 hsa-miR-874-5p 0 0 1
chr11:63825244|63825435 hsa-miR-874-3p 0 0 1
chr11:63825244|63825435 hsa-miR-147b-5p 0 0 1
chr11:63825244|63825435 hsa-miR-147b-3p 0 0 1
chr11:63825244|63825435 hsa-miR-744-5p 0 0 1
chr11:63825244|63825435 hsa-miR-744-3p 0 0 1
chr11:63825244|63825435 hsa-miR-873-5p 0 0 1
chr11:63825244|63825435 hsa-miR-873-3p 0 0 1
chr11:63825244|63825435 hsa-miR-939-5p 0 0 1
chr11:63825244|63825435 hsa-miR-939-3p 0 0 1
chr11:63825244|63825435 hsa-miR-1321 0 0 1
chr11:63825244|63825435 hsa-miR-1324 0 0 1
chr11:63825244|63825435 hsa-miR-1825 0 0 1
chr11:63825244|63825435 hsa-miR-1827 0 0 1
chr11:63825244|63825435 hsa-miR-491-5p 0 0 1
chr11:63825244|63825435 hsa-miR-299-3p 0 0 1
chr11:63825244|63825435 hsa-miR-146b-3p 0 0 1
chr11:63825244|63825435 hsa-miR-140-3p 0 0 1
chr11:63825244|63825435 hsa-miR-320b 0 0 1
chr11:63825244|63825435 hsa-miR-320c 0 0 1
chr11:63825244|63825435 hsa-miR-515-3p 0 0 1
chr11:63825244|63825435 hsa-miR-320d 0 0 1
chr11:63825244|63825435 hsa-miR-550 0 0 1
chr11:63825244|63825435 hsa-miR-638 1 0 0
chr11:63825244|63825435 hsa-miR-658 1 0 0
chr11:63825244|63825435 hsa-miR-936 1 0 0
chr11:63825244|63825435 hsa-miR-1268a 1 0 0
chr11:63825244|63825435 hsa-miR-3138 1 0 0
chr11:63825244|63825435 hsa-miR-3141 1 0 0
chr11:63825244|63825435 hsa-miR-3147 1 0 0
chr11:63825244|63825435 hsa-miR-3154 1 0 0
chr11:63825244|63825435 hsa-miR-3175 1 0 0
chr11:63825244|63825435 hsa-miR-3196 1 0 0
chr11:63825244|63825435 hsa-miR-4298 1 0 0
chr11:63825244|63825435 hsa-miR-4300 1 0 0
chr11:63825244|63825435 hsa-miR-4270 1 0 0
chr11:63825244|63825435 hsa-miR-3660 1 0 0
chr11:63825244|63825435 hsa-miR-3911 1 0 0
chr11:63825244|63825435 hsa-miR-3937 1 0 0
chr11:63825244|63825435 hsa-miR-3945 1 0 0
chr11:63825244|63825435 hsa-miR-1268b 1 0 0
chr11:63825244|63825435 hsa-miR-4462 1 0 0
chr11:63825244|63825435 hsa-miR-4466 1 0 0
chr11:63825244|63825435 hsa-miR-4468 1 0 0
chr11:63825244|63825435 hsa-miR-4471 1 0 0
chr11:63825244|63825435 hsa-miR-4488 1 0 0
chr11:63825244|63825435 hsa-miR-4510 1 0 0
chr11:63825244|63825435 hsa-miR-4514 1 0 0
chr11:63825244|63825435 hsa-miR-4525 1 0 0
chr11:63825244|63825435 hsa-miR-4651 1 0 0
chr11:63825244|63825435 hsa-miR-4656 1 0 0
chr11:63825244|63825435 hsa-miR-4688 1 0 0
chr11:63825244|63825435 hsa-miR-4689 1 0 0
chr11:63825244|63825435 hsa-miR-4706 1 0 0
chr11:63825244|63825435 hsa-miR-4739 1 0 0
chr11:63825244|63825435 hsa-miR-4779 1 0 0
chr11:63825244|63825435 hsa-miR-5090 1 0 0
chr11:63825244|63825435 hsa-miR-5698 1 0 0
chr11:63825244|63825435 hsa-miR-5739 1 0 0
chr11:63825244|63825435 hsa-miR-6081 1 0 0
chr11:63825244|63825435 hsa-miR-6090 1 0 0
chr11:63825244|63825435 hsa-miR-6127 1 0 0
chr11:63825244|63825435 hsa-miR-6129 1 0 0
chr11:63825244|63825435 hsa-miR-6133 1 0 0
chr11:63825244|63825435 hsa-miR-6165 1 0 0
chr11:63825244|63825435 hsa-miR-6860 1 0 0
chr11:63825244|63825435 hsa-miR-7150 1 0 0
chr11:63825244|63825435 hsa-miR-8072 1 0 0
chr11:63825244|63825435 hsa-miR-8085 1 0 0
chr11:63825244|63825435 hsa-miR-8089 1 0 0
chr11:63825244|63825435 hsa-miR-12115 1 0 0
chr11:63825244|63825435 hsa-miR-211-3p 1 0 0
chr11:63825244|63825435 hsa-miR-4433b-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6734-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6747-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6765-5p 1 0 0
chr11:63825244|63825435 hsa-miR-671-5p 1 0 0
chr11:63825244|63825435 hsa-miR-7106-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6825-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6894-5p 1 0 0
chr11:63825244|63825435 hsa-miR-125a-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6799-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6510-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6807-5p 1 0 0
chr11:63825244|63825435 hsa-miR-3192-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6873-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4695-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6730-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4655-5p 1 0 0
chr11:63825244|63825435 hsa-miR-7845-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6716-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1292-5p 1 0 0
chr11:63825244|63825435 hsa-miR-3180-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6796-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6732-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6805-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6827-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6798-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1224-5p 1 0 0
chr11:63825244|63825435 hsa-miR-2467-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6810-5p 1 0 0
chr11:63825244|63825435 hsa-miR-542-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4640-5p 1 0 0
chr11:63825244|63825435 hsa-miR-885-3p 1 0 0
chr11:63825244|63825435 hsa-miR-1908-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1228-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6771-5p 1 0 0
chr11:63825244|63825435 hsa-miR-92b-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6847-5p 1 0 0
chr11:63825244|63825435 hsa-miR-149-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6824-5p 1 0 0
chr11:63825244|63825435 hsa-miR-3162-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6869-5p 1 0 0
chr11:63825244|63825435 hsa-miR-423-5p 1 0 0
chr11:63825244|63825435 hsa-miR-3191-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6826-5p 1 0 0
chr11:63825244|63825435 hsa-miR-7113-5p 1 0 0
chr11:63825244|63825435 hsa-miR-483-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6767-5p 1 0 0
chr11:63825244|63825435 hsa-miR-3144-5p 1 0 0
chr11:63825244|63825435 hsa-miR-10400-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1207-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4763-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6812-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6816-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6870-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6893-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1343-5p 1 0 0
chr11:63825244|63825435 hsa-miR-3180 1 0 0
chr11:63825244|63825435 hsa-miR-6726-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6743-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6752-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6754-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6756-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6803-5p 1 0 0
chr11:63825244|63825435 hsa-miR-7110-5p 1 0 0
chr11:63825244|63825435 hsa-miR-10401-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1249-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6722-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6751-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6763-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6774-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6779-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6780a-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6797-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6808-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6875-5p 1 0 0
chr11:63825244|63825435 hsa-miR-7111-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4728-5p 1 0 0
chr11:63825244|63825435 hsa-miR-5196-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6780b-5p 1 0 0
chr11:63825244|63825435 hsa-miR-10396a-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1237-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1909-3p 1 0 0
chr11:63825244|63825435 hsa-miR-328-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4649-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4726-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4745-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4749-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6735-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6777-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6794-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6795-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6846-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6848-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6858-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6883-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6887-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6889-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4723-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6831-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6845-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6885-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1238-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4758-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4633-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6511a-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6731-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6758-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6856-5p 1 0 0
chr11:63825244|63825435 hsa-miR-1914-3p 1 0 0
chr11:63825244|63825435 hsa-miR-6891-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6750-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6766-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6785-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4667-5p 1 0 0
chr11:63825244|63825435 hsa-miR-5591-5p 1 0 0
chr11:63825244|63825435 hsa-miR-550a-3-5p 1 0 0
chr11:63825244|63825435 hsa-miR-550a-5p 1 0 0
chr11:63825244|63825435 hsa-miR-6762-5p 1 0 0
chr11:63825244|63825435 hsa-miR-4676-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:63825244|63825435
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MALLFLGKPACSTRASTFAPPSAQNAVPSLSASLAPHSLCVCGPLSAFCYPII
Nucleotide Sequence CTGGCCTTGCTGTTCCTGGGGAAGCCAGCGTGCTCCACCAGGGCATCCACATTTGCTCCTCCCTCTGCTCAAAATGCTGTTCCCTCCCTGTCTGCCTCACTGGCTCCTCACTCCCTCTGTGTCTGTGGTCCCCTGTCAGCTTTCTGCTATCCTATTATC
CircID chr11:63825244|63825435
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MLLPLLKMLFPPCLPHWLLTPSVSVVPCQLSAILL
Nucleotide Sequence TTGCTCCTCCCTCTGCTCAAAATGCTGTTCCCTCCCTGTCTGCCTCACTGGCTCCTCACTCCCTCTGTGTCTGTGGTCCCCTGTCAGCTTTCTGCTATCCTATTA
CircID chr11:63825244|63825435
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MSRGRSKCGCPGGARWLPQEQQGQCLCGERDVGGE
Nucleotide Sequence TTGAGCAGAGGGAGGAGCAAATGTGGATGCCCTGGTGGAGCACGCTGGCTTCCCCAGGAACAGCAAGGCCAGTGCCTGTGCGGGGAGCGGGATGTGGGGGGAGAG
CircID chr11:63825244|63825435
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MTGDHRHRGSEEPVRQTGREQHFEQREEQMWMPWWSTLASPGTARPVPVRGAGCGGR
Nucleotide Sequence CTGACAGGGGACCACAGACACAGAGGGAGTGAGGAGCCAGTGAGGCAGACAGGGAGGGAACAGCATTTTGAGCAGAGGGAGGAGCAAATGTGGATGCCCTGGTGGAGCACGCTGGCTTCCCCAGGAACAGCAAGGCCAGTGCCTGTGCGGGGAGCGGGATGTGGGGGGAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab