CircRNA Information

General Information
circRNA Basic Information
CircID chr11:63908964|63909123
Strand +
CircType exon
Host Gene ENSG00000072518.19;
Algorism CIRI2;
Sequence CTCCATCTCCCACTGCACGAAGTCCTCGTGGCCCGGCGTGCCGTGCATGCACAGCAGCATGTACTTCTCATGCAGCTCGCTCTGGCAGCTGTTCGCGTCCAGCACCTTGCGGATCTCCCGCATCATCTCGTTGGGCTCCATGGAGCTCGTGGTCTTCATA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:63908964|63909123 hsa-miR-18a-5p 0 0 1
chr11:63908964|63909123 hsa-miR-18a-3p 0 0 1
chr11:63908964|63909123 hsa-miR-22-5p 0 0 1
chr11:63908964|63909123 hsa-miR-22-3p 0 0 1
chr11:63908964|63909123 hsa-miR-143-5p 0 0 1
chr11:63908964|63909123 hsa-miR-143-3p 0 0 1
chr11:63908964|63909123 hsa-miR-18b-5p 0 0 1
chr11:63908964|63909123 hsa-miR-18b-3p 0 0 1
chr11:63908964|63909123 hsa-miR-517-5p 0 0 1
chr11:63908964|63909123 hsa-miR-517a-3p 0 0 1
chr11:63908964|63909123 hsa-miR-517b-3p 0 0 1
chr11:63908964|63909123 hsa-miR-517c-3p 0 0 1
chr11:63908964|63909123 hsa-miR-558 0 0 1
chr11:63908964|63909123 hsa-miR-611 0 0 1
chr11:63908964|63909123 hsa-miR-1287-5p 0 0 1
chr11:63908964|63909123 hsa-miR-1287-3p 0 0 1
chr11:63908964|63909123 hsa-miR-1253 0 0 1
chr11:63908964|63909123 hsa-miR-1322 0 1 1
chr11:63908964|63909123 hsa-miR-1300 0 0 1
chr11:63908964|63909123 hsa-miR-3131 1 1 0
chr11:63908964|63909123 hsa-miR-3195 1 0 0
chr11:63908964|63909123 hsa-miR-4525 1 1 0
chr11:63908964|63909123 hsa-miR-4683 0 1 0
chr11:63908964|63909123 hsa-miR-4721 1 0 0
chr11:63908964|63909123 hsa-miR-5194 1 0 0
chr11:63908964|63909123 hsa-miR-6088 1 1 0
chr11:63908964|63909123 hsa-miR-12121 1 0 0
chr11:63908964|63909123 hsa-miR-6765-5p 1 0 0
chr11:63908964|63909123 hsa-miR-6799-5p 1 0 0
chr11:63908964|63909123 hsa-miR-3187-3p 1 0 0
chr11:63908964|63909123 hsa-miR-6829-5p 0 1 0
chr11:63908964|63909123 hsa-miR-6798-5p 1 0 0
chr11:63908964|63909123 hsa-miR-1224-5p 1 0 0
chr11:63908964|63909123 hsa-miR-4640-5p 1 0 0
chr11:63908964|63909123 hsa-miR-6749-5p 1 0 0
chr11:63908964|63909123 hsa-miR-1250-5p 1 1 0
chr11:63908964|63909123 hsa-miR-4761-5p 0 1 0
chr11:63908964|63909123 hsa-miR-3177-3p 1 1 0
chr11:63908964|63909123 hsa-miR-1233-5p 1 0 0
chr11:63908964|63909123 hsa-miR-5001-5p 1 0 0
chr11:63908964|63909123 hsa-miR-6862-5p 1 0 0
chr11:63908964|63909123 hsa-miR-4685-5p 1 0 0
chr11:63908964|63909123 hsa-miR-4726-5p 1 0 0
chr11:63908964|63909123 hsa-miR-6777-5p 1 0 0
chr11:63908964|63909123 hsa-miR-10394-3p 1 0 0
chr11:63908964|63909123 hsa-miR-365a-5p 1 0 0
chr11:63908964|63909123 hsa-miR-3679-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:63908964|63909123
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MHEVLVARRAVHAQQHVLLMQLALAAVRVQHLADLPHHLVGLHGARGLH
Nucleotide Sequence CTGCACGAAGTCCTCGTGGCCCGGCGTGCCGTGCATGCACAGCAGCATGTACTTCTCATGCAGCTCGCTCTGGCAGCTGTTCGCGTCCAGCACCTTGCGGATCTCCCGCATCATCTCGTTGGGCTCCATGGAGCTCGTGGTCTTCAT

CircID chr11:63908964|63909123
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MHSSMYFSCSSLWQLFASSTLRISRIISLGSMELVVFI
Nucleotide Sequence ATGCACAGCAGCATGTACTTCTCATGCAGCTCGCTCTGGCAGCTGTTCGCGTCCAGCACCTTGCGGATCTCCCGCATCATCTCGTTGGGCTCCATGGAGCTCGTGGTCTTCATA

CircID chr11:63908964|63909123
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MKTTSSMEPNEMMREIRKVLDANSCQSELHEKYMLLCMHGTPGHEDFVQWEME
Nucleotide Sequence ATGAAGACCACGAGCTCCATGGAGCCCAACGAGATGATGCGGGAGATCCGCAAGGTGCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGAGAAGTACATGCTGCTGTGCATGCACGGCACGCCGGGCCACGAGGACTTCGTGCAGTGGGAGATGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites