CircRNA Information

General Information
circRNA Basic Information
CircID chr11:63997185|63997431
Strand +
CircType exon
Host Gene ENSG00000167770.10;
Algorism CIRI2;
Sequence TCCACCTGGATGGACACGCTGAGGGCCTGGGCCAGCGCAATGATGTGGATGTGGTCGCTCTCCTTGCACATGGGCTCCACCTCCTGTGGCACAGGTGCCGGTCAGGCCCTGGTCTCCGCACCCCGCCCCAGGCCCTGTGGGCCCACTGCACTCCCCCGGCCGAGAGTAAAGGGGAGGGGGACGGCACCTGCTGGCAGAACTCCTTGACAGTCCGTCCACCCTCGATGAAGTGCTCGAAGAACTTGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:63997185|63997431 hsa-miR-19a-5p 0 0 1
chr11:63997185|63997431 hsa-miR-19a-3p 0 0 1
chr11:63997185|63997431 hsa-miR-214-5p 0 0 1
chr11:63997185|63997431 hsa-miR-214-3p 0 0 1
chr11:63997185|63997431 hsa-miR-184 0 1 1
chr11:63997185|63997431 hsa-miR-661 1 0 1
chr11:63997185|63997431 hsa-miR-658 0 0 1
chr11:63997185|63997431 hsa-miR-675-5p 0 0 1
chr11:63997185|63997431 hsa-miR-675-3p 0 0 1
chr11:63997185|63997431 hsa-miR-1227-5p 0 0 1
chr11:63997185|63997431 hsa-miR-1227-3p 0 0 1
chr11:63997185|63997431 hsa-miR-1202 0 0 1
chr11:63997185|63997431 hsa-miR-1307-5p 0 0 1
chr11:63997185|63997431 hsa-miR-1307-3p 0 0 1
chr11:63997185|63997431 hsa-miR-296-5p 0 0 1
chr11:63997185|63997431 hsa-miR-342-5p 0 0 1
chr11:63997185|63997431 hsa-miR-220c 0 0 1
chr11:63997185|63997431 hsa-miR-19b 0 0 1
chr11:63997185|63997431 hsa-miR-663 0 0 1
chr11:63997185|63997431 hsa-miR-608 1 0 0
chr11:63997185|63997431 hsa-miR-663a 1 1 0
chr11:63997185|63997431 hsa-miR-762 1 0 0
chr11:63997185|63997431 hsa-miR-764 0 1 0
chr11:63997185|63997431 hsa-miR-1182 1 1 0
chr11:63997185|63997431 hsa-miR-1268a 1 0 0
chr11:63997185|63997431 hsa-miR-1538 1 0 0
chr11:63997185|63997431 hsa-miR-2861 1 1 0
chr11:63997185|63997431 hsa-miR-3196 1 0 0
chr11:63997185|63997431 hsa-miR-3918 0 1 0
chr11:63997185|63997431 hsa-miR-1268b 1 0 0
chr11:63997185|63997431 hsa-miR-4428 0 1 0
chr11:63997185|63997431 hsa-miR-4512 0 1 0
chr11:63997185|63997431 hsa-miR-4634 1 0 0
chr11:63997185|63997431 hsa-miR-4651 1 0 0
chr11:63997185|63997431 hsa-miR-4675 1 0 0
chr11:63997185|63997431 hsa-miR-4741 1 0 0
chr11:63997185|63997431 hsa-miR-5572 1 0 0
chr11:63997185|63997431 hsa-miR-5698 1 1 0
chr11:63997185|63997431 hsa-miR-5787 1 0 0
chr11:63997185|63997431 hsa-miR-6745 0 1 0
chr11:63997185|63997431 hsa-miR-8089 1 0 0
chr11:63997185|63997431 hsa-miR-12114 0 1 0
chr11:63997185|63997431 hsa-miR-4747-3p 1 0 0
chr11:63997185|63997431 hsa-miR-504-3p 0 1 0
chr11:63997185|63997431 hsa-miR-4665-3p 0 1 0
chr11:63997185|63997431 hsa-miR-6747-5p 1 0 0
chr11:63997185|63997431 hsa-miR-8071 0 1 0
chr11:63997185|63997431 hsa-miR-6804-5p 1 0 0
chr11:63997185|63997431 hsa-miR-4786-5p 0 1 0
chr11:63997185|63997431 hsa-miR-148a-5p 0 1 0
chr11:63997185|63997431 hsa-miR-3180-3p 1 1 0
chr11:63997185|63997431 hsa-miR-6796-5p 1 0 0
chr11:63997185|63997431 hsa-miR-4655-3p 1 0 0
chr11:63997185|63997431 hsa-miR-6782-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6786-5p 1 1 0
chr11:63997185|63997431 hsa-miR-6753-5p 0 1 0
chr11:63997185|63997431 hsa-miR-1908-5p 0 1 0
chr11:63997185|63997431 hsa-miR-1228-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6749-5p 1 1 0
chr11:63997185|63997431 hsa-miR-4787-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6824-5p 1 0 0
chr11:63997185|63997431 hsa-miR-194-3p 0 1 0
chr11:63997185|63997431 hsa-miR-6887-3p 0 1 0
chr11:63997185|63997431 hsa-miR-4804-5p 0 1 0
chr11:63997185|63997431 hsa-miR-6738-3p 0 1 0
chr11:63997185|63997431 hsa-miR-4727-5p 0 1 0
chr11:63997185|63997431 hsa-miR-4763-3p 1 0 0
chr11:63997185|63997431 hsa-miR-6778-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6787-5p 1 1 0
chr11:63997185|63997431 hsa-miR-6812-5p 0 1 0
chr11:63997185|63997431 hsa-miR-6816-5p 1 1 0
chr11:63997185|63997431 hsa-miR-6775-5p 1 0 0
chr11:63997185|63997431 hsa-miR-1343-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6737-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6752-5p 1 1 0
chr11:63997185|63997431 hsa-miR-6756-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6813-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6819-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6842-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6851-5p 1 1 0
chr11:63997185|63997431 hsa-miR-7107-5p 1 0 0
chr11:63997185|63997431 hsa-miR-10396a-5p 1 0 0
chr11:63997185|63997431 hsa-miR-10396b-5p 1 1 0
chr11:63997185|63997431 hsa-miR-1237-5p 1 0 0
chr11:63997185|63997431 hsa-miR-4685-5p 0 1 0
chr11:63997185|63997431 hsa-miR-4749-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6729-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6848-5p 1 0 0
chr11:63997185|63997431 hsa-miR-939-5p 1 0 0
chr11:63997185|63997431 hsa-miR-10396a-3p 1 0 0
chr11:63997185|63997431 hsa-miR-3689d 0 1 0
chr11:63997185|63997431 hsa-miR-6724-5p 1 1 0
chr11:63997185|63997431 hsa-miR-6791-5p 1 0 0
chr11:63997185|63997431 hsa-miR-6837-5p 0 1 0
chr11:63997185|63997431 hsa-miR-3059-5p 1 0 0
chr11:63997185|63997431 hsa-miR-513c-5p 1 0 0
chr11:63997185|63997431 hsa-miR-7157-3p 0 1 0
chr11:63997185|63997431 hsa-miR-4670-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:63997185|63997431
ORF Type ORF1
Protein Length 65
Nucleotide Length 198
Protein Sequence MDTLRAWASAMMWMWSLSLHMGSTSCGTGAGQALVSAPRPRPCGPTALPRPRVKGRGTAPAGRTP
Nucleotide Sequence ATGGACACGCTGAGGGCCTGGGCCAGCGCAATGATGTGGATGTGGTCGCTCTCCTTGCACATGGGCTCCACCTCCTGTGGCACAGGTGCCGGTCAGGCCCTGGTCTCCGCACCCCGCCCCAGGCCCTGTGGGCCCACTGCACTCCCCCGGCCGAGAGTAAAGGGGAGGGGGACGGCACCTGCTGGCAGAACTCCTTGA
CircID chr11:63997185|63997431
ORF Type ORF2
Protein Length 80
Nucleotide Length 240
Protein Sequence MDGHAEGLGQRNDVDVVALLAHGLHLLWHRCRSGPGLRTPPQALWAHCTPPAESKGEGDGTCWQNSLTVRPPSMKCSKNL
Nucleotide Sequence CTGGATGGACACGCTGAGGGCCTGGGCCAGCGCAATGATGTGGATGTGGTCGCTCTCCTTGCACATGGGCTCCACCTCCTGTGGCACAGGTGCCGGTCAGGCCCTGGTCTCCGCACCCCGCCCCAGGCCCTGTGGGCCCACTGCACTCCCCCGGCCGAGAGTAAAGGGGAGGGGGACGGCACCTGCTGGCAGAACTCCTTGACAGTCCGTCCACCCTCGATGAAGTGCTCGAAGAACTTG
CircID chr11:63997185|63997431
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MCHRRWSPCARRATTSTSLRWPRPSACPSRW
Nucleotide Sequence CTGTGCCACAGGAGGTGGAGCCCATGTGCAAGGAGAGCGACCACATCCACATCATTGCGCTGGCCCAGGCCCTCAGCGTGTCCATCCAGGTGG
CircID chr11:63997185|63997431
ORF Type ORF4
Protein Length 70
Nucleotide Length 210
Protein Sequence MSRSSASRCRPPPLYSRPGECSGPTGPGAGCGDQGLTGTCATGGGAHVQGERPHPHHCAGPGPQRVHPGG
Nucleotide Sequence CTGTCAAGGAGTTCTGCCAGCAGGTGCCGTCCCCCTCCCCTTTACTCTCGGCCGGGGGAGTGCAGTGGGCCCACAGGGCCTGGGGCGGGGTGCGGAGACCAGGGCCTGACCGGCACCTGTGCCACAGGAGGTGGAGCCCATGTGCAAGGAGAGCGACCACATCCACATCATTGCGCTGGCCCAGGCCCTCAGCGTGTCCATCCAGGTGGA
CircID chr11:63997185|63997431
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MPAGAVPLPFTLGRGSAVGPQGLGRGAETRA
Nucleotide Sequence CTGCCAGCAGGTGCCGTCCCCCTCCCCTTTACTCTCGGCCGGGGGAGTGCAGTGGGCCCACAGGGCCTGGGGCGGGGTGCGGAGACCAGGGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab