CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64211130|64211394
Strand +
CircType exon
Host Gene ENSG00000149781.11;
Algorism CIRI2;
Sequence GCTGGAGCAGGAGGGGGTCGGGTGGCGGCTGGGGCCGGCTCAGCATGTGGTAGCAGGCCTCAGTCTGGGCGCTGTCCGAGAAGTGAGCTGGCATCCCCCGGAACAGTGCAGGTGCCACGCCTGGAGTGCAGGTTGGGAGTCAACCAGGCCTGTCCCCCAGGGCTGGGACTCACGGGCCGGCCCCTGCCCCCAACCCCCCAGGCCCACCCCCACTTGCACTCACCCCCAGCCAAGACAACCTTGCTCAAGTCATAGAGCTCTTCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64211130|64211394 hsa-miR-130a-5p 0 0 1
chr11:64211130|64211394 hsa-miR-130a-3p 0 0 1
chr11:64211130|64211394 hsa-miR-150-5p 0 0 1
chr11:64211130|64211394 hsa-miR-150-3p 0 0 1
chr11:64211130|64211394 hsa-miR-301a-5p 0 0 1
chr11:64211130|64211394 hsa-miR-301a-3p 0 0 1
chr11:64211130|64211394 hsa-miR-130b-5p 0 0 1
chr11:64211130|64211394 hsa-miR-130b-3p 0 0 1
chr11:64211130|64211394 hsa-miR-370-5p 0 0 1
chr11:64211130|64211394 hsa-miR-370-3p 0 0 1
chr11:64211130|64211394 hsa-miR-431-5p 0 0 1
chr11:64211130|64211394 hsa-miR-431-3p 0 0 1
chr11:64211130|64211394 hsa-miR-511-5p 0 0 1
chr11:64211130|64211394 hsa-miR-511-3p 0 0 1
chr11:64211130|64211394 hsa-miR-563 0 0 1
chr11:64211130|64211394 hsa-miR-608 1 1 1
chr11:64211130|64211394 hsa-miR-625-5p 0 0 1
chr11:64211130|64211394 hsa-miR-625-3p 0 0 1
chr11:64211130|64211394 hsa-miR-637 1 1 1
chr11:64211130|64211394 hsa-miR-647 0 0 1
chr11:64211130|64211394 hsa-miR-661 1 1 1
chr11:64211130|64211394 hsa-miR-454-5p 0 0 1
chr11:64211130|64211394 hsa-miR-454-3p 0 0 1
chr11:64211130|64211394 hsa-miR-766-5p 0 0 1
chr11:64211130|64211394 hsa-miR-766-3p 0 0 1
chr11:64211130|64211394 hsa-miR-541-5p 0 0 1
chr11:64211130|64211394 hsa-miR-541-3p 0 0 1
chr11:64211130|64211394 hsa-miR-301b-5p 0 0 1
chr11:64211130|64211394 hsa-miR-301b-3p 0 0 1
chr11:64211130|64211394 hsa-miR-1202 0 0 1
chr11:64211130|64211394 hsa-miR-1208 0 0 1
chr11:64211130|64211394 hsa-miR-1275 1 1 1
chr11:64211130|64211394 hsa-miR-486-3p 0 0 1
chr11:64211130|64211394 hsa-miR-654-5p 0 0 1
chr11:64211130|64211394 hsa-miR-508-5p 0 1 1
chr11:64211130|64211394 hsa-miR-140-3p 0 0 1
chr11:64211130|64211394 hsa-miR-1207-5p 0 0 1
chr11:64211130|64211394 hsa-miR-453 0 0 1
chr11:64211130|64211394 hsa-miR-762 1 1 0
chr11:64211130|64211394 hsa-miR-1268a 1 0 0
chr11:64211130|64211394 hsa-miR-2861 1 1 0
chr11:64211130|64211394 hsa-miR-4313 1 0 0
chr11:64211130|64211394 hsa-miR-4292 0 1 0
chr11:64211130|64211394 hsa-miR-3652 1 0 0
chr11:64211130|64211394 hsa-miR-3666 1 1 0
chr11:64211130|64211394 hsa-miR-1268b 1 0 0
chr11:64211130|64211394 hsa-miR-4430 1 0 0
chr11:64211130|64211394 hsa-miR-4488 1 0 0
chr11:64211130|64211394 hsa-miR-4492 1 0 0
chr11:64211130|64211394 hsa-miR-4494 0 1 0
chr11:64211130|64211394 hsa-miR-4505 1 0 0
chr11:64211130|64211394 hsa-miR-4507 1 0 0
chr11:64211130|64211394 hsa-miR-4525 0 1 0
chr11:64211130|64211394 hsa-miR-1587 1 0 0
chr11:64211130|64211394 hsa-miR-3972 0 1 0
chr11:64211130|64211394 hsa-miR-4651 1 1 0
chr11:64211130|64211394 hsa-miR-4656 1 0 0
chr11:64211130|64211394 hsa-miR-4658 1 0 0
chr11:64211130|64211394 hsa-miR-4663 0 1 0
chr11:64211130|64211394 hsa-miR-4710 1 0 0
chr11:64211130|64211394 hsa-miR-4741 1 0 0
chr11:64211130|64211394 hsa-miR-4785 0 1 0
chr11:64211130|64211394 hsa-miR-5572 1 0 0
chr11:64211130|64211394 hsa-miR-5698 1 0 0
chr11:64211130|64211394 hsa-miR-5787 1 0 0
chr11:64211130|64211394 hsa-miR-6077 1 1 0
chr11:64211130|64211394 hsa-miR-7150 1 0 0
chr11:64211130|64211394 hsa-miR-7703 0 1 0
chr11:64211130|64211394 hsa-miR-8078 1 0 0
chr11:64211130|64211394 hsa-miR-8085 1 0 0
chr11:64211130|64211394 hsa-miR-8089 1 0 0
chr11:64211130|64211394 hsa-miR-92a-1-5p 1 1 0
chr11:64211130|64211394 hsa-miR-4731-5p 1 1 0
chr11:64211130|64211394 hsa-miR-504-3p 1 0 0
chr11:64211130|64211394 hsa-miR-7155-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6879-3p 1 0 0
chr11:64211130|64211394 hsa-miR-6720-5p 0 1 0
chr11:64211130|64211394 hsa-miR-3192-5p 1 0 0
chr11:64211130|64211394 hsa-miR-874-5p 0 1 0
chr11:64211130|64211394 hsa-miR-6741-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6727-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4474-3p 1 0 0
chr11:64211130|64211394 hsa-miR-6721-5p 0 1 0
chr11:64211130|64211394 hsa-miR-5589-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6776-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4728-3p 1 1 0
chr11:64211130|64211394 hsa-miR-6793-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6796-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6732-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6798-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6881-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6782-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4793-3p 0 1 0
chr11:64211130|64211394 hsa-miR-6735-3p 1 1 0
chr11:64211130|64211394 hsa-miR-6882-3p 1 0 0
chr11:64211130|64211394 hsa-miR-6788-3p 1 1 0
chr11:64211130|64211394 hsa-miR-6852-5p 0 1 0
chr11:64211130|64211394 hsa-miR-6835-5p 1 0 0
chr11:64211130|64211394 hsa-miR-7109-5p 1 0 0
chr11:64211130|64211394 hsa-miR-1226-5p 1 0 0
chr11:64211130|64211394 hsa-miR-7108-3p 1 0 0
chr11:64211130|64211394 hsa-miR-1909-5p 1 0 0
chr11:64211130|64211394 hsa-miR-2277-3p 0 1 0
chr11:64211130|64211394 hsa-miR-1229-5p 1 0 0
chr11:64211130|64211394 hsa-miR-1908-3p 1 0 0
chr11:64211130|64211394 hsa-miR-4640-5p 1 0 0
chr11:64211130|64211394 hsa-miR-1228-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6749-5p 1 1 0
chr11:64211130|64211394 hsa-miR-4787-5p 1 0 0
chr11:64211130|64211394 hsa-miR-937-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4640-3p 0 1 0
chr11:64211130|64211394 hsa-miR-5010-5p 1 1 0
chr11:64211130|64211394 hsa-miR-4638-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4732-3p 1 0 0
chr11:64211130|64211394 hsa-miR-4632-3p 1 0 0
chr11:64211130|64211394 hsa-miR-6746-3p 1 1 0
chr11:64211130|64211394 hsa-miR-891a-3p 0 1 0
chr11:64211130|64211394 hsa-miR-4649-3p 0 1 0
chr11:64211130|64211394 hsa-miR-6857-3p 0 1 0
chr11:64211130|64211394 hsa-miR-6789-3p 1 0 0
chr11:64211130|64211394 hsa-miR-6510-3p 1 0 0
chr11:64211130|64211394 hsa-miR-4763-3p 1 1 0
chr11:64211130|64211394 hsa-miR-6769b-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6787-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6812-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6816-5p 1 1 0
chr11:64211130|64211394 hsa-miR-6870-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6737-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6743-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6752-5p 1 1 0
chr11:64211130|64211394 hsa-miR-6756-5p 1 1 0
chr11:64211130|64211394 hsa-miR-6769a-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6803-5p 1 1 0
chr11:64211130|64211394 hsa-miR-6842-5p 1 1 0
chr11:64211130|64211394 hsa-miR-6851-5p 1 0 0
chr11:64211130|64211394 hsa-miR-7107-5p 1 0 0
chr11:64211130|64211394 hsa-miR-7110-5p 1 1 0
chr11:64211130|64211394 hsa-miR-6722-3p 1 1 0
chr11:64211130|64211394 hsa-miR-6751-5p 1 1 0
chr11:64211130|64211394 hsa-miR-7111-5p 1 0 0
chr11:64211130|64211394 hsa-miR-3620-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6780b-5p 1 0 0
chr11:64211130|64211394 hsa-miR-1237-5p 1 0 0
chr11:64211130|64211394 hsa-miR-1909-3p 0 1 0
chr11:64211130|64211394 hsa-miR-328-5p 1 1 0
chr11:64211130|64211394 hsa-miR-4745-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6848-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4758-5p 1 0 0
chr11:64211130|64211394 hsa-miR-3940-5p 1 0 0
chr11:64211130|64211394 hsa-miR-1199-5p 0 1 0
chr11:64211130|64211394 hsa-miR-4665-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6736-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4700-5p 1 0 0
chr11:64211130|64211394 hsa-miR-4472 1 0 0
chr11:64211130|64211394 hsa-miR-6790-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6724-5p 1 0 0
chr11:64211130|64211394 hsa-miR-6791-5p 1 1 0
chr11:64211130|64211394 hsa-miR-9851-3p 1 0 0
chr11:64211130|64211394 hsa-miR-10392-3p 0 1 0
chr11:64211130|64211394 hsa-miR-3622a-3p 1 1 0
chr11:64211130|64211394 hsa-miR-323b-5p 1 1 0
chr11:64211130|64211394 hsa-miR-380-5p 0 1 0
chr11:64211130|64211394 hsa-miR-10399-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:64211130|64211394
ORF Type ORF1
Protein Length 55
Nucleotide Length 168
Protein Sequence MASPGTVQVPRLECRLGVNQACPPGLGLTGRPLPPTPQAHPHLHSPPAKTTLLKS
Nucleotide Sequence CTGGCATCCCCCGGAACAGTGCAGGTGCCACGCCTGGAGTGCAGGTTGGGAGTCAACCAGGCCTGTCCCCCAGGGCTGGGACTCACGGGCCGGCCCCTGCCCCCAACCCCCCAGGCCCACCCCCACTTGCACTCACCCCCAGCCAAGACAACCTTGCTCAAGTCATAG
CircID chr11:64211130|64211394
ORF Type ORF2
Protein Length 88
Nucleotide Length 264
Protein Sequence LEQEGVGWRLGPAQHVVAGLSLGAVREVSWHPPEQCRCHAWSAGWESTRPVPQGWDSRAGPCPQPPRPTPTCTHPQPRQPCSSHRALP
Nucleotide Sequence CTGGAGCAGGAGGGGGTCGGGTGGCGGCTGGGGCCGGCTCAGCATGTGGTAGCAGGCCTCAGTCTGGGCGCTGTCCGAGAAGTGAGCTGGCATCCCCCGGAACAGTGCAGGTGCCACGCCTGGAGTGCAGGTTGGGAGTCAACCAGGCCTGTCCCCCAGGGCTGGGACTCACGGGCCGGCCCCTGCCCCCAACCCCCCAGGCCCACCCCCACTTGCACTCACCCCCAGCCAAGACAACCTTGCTCAAGTCATAGAGCTCTTCCT
CircID chr11:64211130|64211394
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MSPRAGTHGPAPAPNPPGPPPLALTPSQDNLAQVIELF
Nucleotide Sequence CTGTCCCCCAGGGCTGGGACTCACGGGCCGGCCCCTGCCCCCAACCCCCCAGGCCCACCCCCACTTGCACTCACCCCCAGCCAAGACAACCTTGCTCAAGTCATAGAGCTCTTC
CircID chr11:64211130|64211394
ORF Type ORF4
Protein Length 35
Nucleotide Length 105
Protein Sequence MFRGMPAHFSDSAQTEACYHMLSRPQPPPDPLLLQ
Nucleotide Sequence CTGTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGCCCAGACTGAGGCCTGCTACCACATGCTGAGCCGGCCCCAGCCGCCACCCGACCCCCTCCTGCTCCAG
CircID chr11:64211130|64211394
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MGGWGQGPARESQPWGTGLVDSQPALQAWHLHCSGGCQLTSRTAPRLRPATTC
Nucleotide Sequence CTGGGGGGTTGGGGGCAGGGGCCGGCCCGTGAGTCCCAGCCCTGGGGGACAGGCCTGGTTGACTCCCAACCTGCACTCCAGGCGTGGCACCTGCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGCCCAGACTGAGGCCTGCTACCACATGCTGA
CircID chr11:64211130|64211394
ORF Type ORF6
Protein Length 62
Nucleotide Length 189
Protein Sequence MSKVVLAGGECKWGWAWGVGGRGRPVSPSPGGQAWLTPNLHSRRGTCTVPGDASSLLGQRPD
Nucleotide Sequence TTGAGCAAGGTTGTCTTGGCTGGGGGTGAGTGCAAGTGGGGGTGGGCCTGGGGGGTTGGGGGCAGGGGCCGGCCCGTGAGTCCCAGCCCTGGGGGACAGGCCTGGTTGACTCCCAACCTGCACTCCAGGCGTGGCACCTGCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGCCCAGACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab