CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64219311|64219622
Strand +
CircType exon
Host Gene ENSG00000149781.11;
Algorism CIRI2;
Sequence CTCCAGGTTGCTCAGGGCCACATCCAGGTCGTCCAGCCCTGGGTCTGTGCCAGCCGGCTCCCCCACCTCCCCGCTCTGGGACAGCTTGTTGATGTGGTACTAGGTGGTCATGAAGCCAGGGAGGGCTGAGTCCAGCAGCCTGGTCCCCTAGCAGTACCCCCAGGCCGGGCTTCCCTGGAGGTAGCCCCCACTCAGGAAGGCCCTTCCTGCCCTGGGACTGGCTCACCTCCCACCTGCCCTGGTGCCCCCAGGCCCGCCTGGTACCTGCAGGGCGGCAAACACCATCATCTCCTCCTCGGTGCAGTCAATCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64219311|64219622 hsa-miR-143-5p 0 0 1
chr11:64219311|64219622 hsa-miR-143-3p 0 0 1
chr11:64219311|64219622 hsa-miR-328-5p 0 0 1
chr11:64219311|64219622 hsa-miR-328-3p 0 0 1
chr11:64219311|64219622 hsa-miR-422a 0 1 1
chr11:64219311|64219622 hsa-miR-433-5p 0 0 1
chr11:64219311|64219622 hsa-miR-433-3p 0 0 1
chr11:64219311|64219622 hsa-miR-575 0 1 1
chr11:64219311|64219622 hsa-miR-619-5p 0 0 1
chr11:64219311|64219622 hsa-miR-619-3p 0 0 1
chr11:64219311|64219622 hsa-miR-625-5p 0 0 1
chr11:64219311|64219622 hsa-miR-625-3p 0 0 1
chr11:64219311|64219622 hsa-miR-631 0 0 1
chr11:64219311|64219622 hsa-miR-637 0 1 1
chr11:64219311|64219622 hsa-miR-661 0 1 1
chr11:64219311|64219622 hsa-miR-657 0 0 1
chr11:64219311|64219622 hsa-miR-765 1 1 1
chr11:64219311|64219622 hsa-miR-939-5p 0 0 1
chr11:64219311|64219622 hsa-miR-939-3p 0 0 1
chr11:64219311|64219622 hsa-miR-943 1 0 1
chr11:64219311|64219622 hsa-miR-1234-3p 0 0 1
chr11:64219311|64219622 hsa-miR-1200 0 1 1
chr11:64219311|64219622 hsa-miR-663b 0 1 1
chr11:64219311|64219622 hsa-miR-1205 0 0 1
chr11:64219311|64219622 hsa-miR-1287-5p 0 0 1
chr11:64219311|64219622 hsa-miR-1287-3p 0 0 1
chr11:64219311|64219622 hsa-miR-1291 0 0 1
chr11:64219311|64219622 hsa-miR-1275 1 1 1
chr11:64219311|64219622 hsa-miR-1234 0 0 1
chr11:64219311|64219622 hsa-miR-512-5p 0 1 1
chr11:64219311|64219622 hsa-miR-671-5p 1 1 1
chr11:64219311|64219622 hsa-miR-490-3p 0 1 1
chr11:64219311|64219622 hsa-miR-140-3p 0 0 1
chr11:64219311|64219622 hsa-miR-125a-5p 0 0 1
chr11:64219311|64219622 hsa-miR-151-5p 0 0 1
chr11:64219311|64219622 hsa-miR-125b 0 0 1
chr11:64219311|64219622 hsa-miR-378 0 0 1
chr11:64219311|64219622 hsa-miR-608 1 0 0
chr11:64219311|64219622 hsa-miR-762 1 1 0
chr11:64219311|64219622 hsa-miR-1268a 1 0 0
chr11:64219311|64219622 hsa-miR-1538 1 0 0
chr11:64219311|64219622 hsa-miR-711 0 1 0
chr11:64219311|64219622 hsa-miR-2861 1 1 0
chr11:64219311|64219622 hsa-miR-3131 1 0 0
chr11:64219311|64219622 hsa-miR-3141 0 1 0
chr11:64219311|64219622 hsa-miR-4297 0 1 0
chr11:64219311|64219622 hsa-miR-4319 0 1 0
chr11:64219311|64219622 hsa-miR-4281 1 0 0
chr11:64219311|64219622 hsa-miR-4290 0 1 0
chr11:64219311|64219622 hsa-miR-3665 1 1 0
chr11:64219311|64219622 hsa-miR-3937 0 1 0
chr11:64219311|64219622 hsa-miR-1268b 1 0 0
chr11:64219311|64219622 hsa-miR-4447 0 1 0
chr11:64219311|64219622 hsa-miR-4449 1 1 0
chr11:64219311|64219622 hsa-miR-4466 1 0 0
chr11:64219311|64219622 hsa-miR-3689c 0 1 0
chr11:64219311|64219622 hsa-miR-4492 0 1 0
chr11:64219311|64219622 hsa-miR-4512 0 1 0
chr11:64219311|64219622 hsa-miR-4651 1 0 0
chr11:64219311|64219622 hsa-miR-4689 1 1 0
chr11:64219311|64219622 hsa-miR-4706 1 1 0
chr11:64219311|64219622 hsa-miR-4739 1 0 0
chr11:64219311|64219622 hsa-miR-4741 1 0 0
chr11:64219311|64219622 hsa-miR-4784 0 1 0
chr11:64219311|64219622 hsa-miR-5698 1 0 0
chr11:64219311|64219622 hsa-miR-6088 1 0 0
chr11:64219311|64219622 hsa-miR-8089 1 0 0
chr11:64219311|64219622 hsa-miR-150-3p 1 1 0
chr11:64219311|64219622 hsa-miR-6734-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6765-5p 1 0 0
chr11:64219311|64219622 hsa-miR-212-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6861-5p 1 0 0
chr11:64219311|64219622 hsa-miR-7106-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6825-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6894-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6799-5p 1 1 0
chr11:64219311|64219622 hsa-miR-766-5p 1 0 0
chr11:64219311|64219622 hsa-miR-7114-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6089 1 0 0
chr11:64219311|64219622 hsa-miR-6807-5p 0 1 0
chr11:64219311|64219622 hsa-miR-4695-5p 1 0 0
chr11:64219311|64219622 hsa-miR-4709-3p 1 0 0
chr11:64219311|64219622 hsa-miR-593-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6762-3p 0 1 0
chr11:64219311|64219622 hsa-miR-6727-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6721-5p 0 1 0
chr11:64219311|64219622 hsa-miR-4655-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6742-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6732-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6798-5p 1 0 0
chr11:64219311|64219622 hsa-miR-3130-3p 0 1 0
chr11:64219311|64219622 hsa-miR-6782-5p 1 0 0
chr11:64219311|64219622 hsa-miR-30b-3p 0 1 0
chr11:64219311|64219622 hsa-miR-5006-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6786-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6852-5p 0 1 0
chr11:64219311|64219622 hsa-miR-1226-5p 0 1 0
chr11:64219311|64219622 hsa-miR-4640-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6753-5p 1 1 0
chr11:64219311|64219622 hsa-miR-3127-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6749-5p 1 1 0
chr11:64219311|64219622 hsa-miR-4787-5p 1 0 0
chr11:64219311|64219622 hsa-miR-4446-3p 0 1 0
chr11:64219311|64219622 hsa-miR-149-3p 1 0 0
chr11:64219311|64219622 hsa-miR-6824-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6802-5p 0 1 0
chr11:64219311|64219622 hsa-miR-584-3p 0 1 0
chr11:64219311|64219622 hsa-miR-1911-3p 0 1 0
chr11:64219311|64219622 hsa-miR-4632-3p 0 1 0
chr11:64219311|64219622 hsa-miR-3913-3p 0 1 0
chr11:64219311|64219622 hsa-miR-1207-5p 1 0 0
chr11:64219311|64219622 hsa-miR-1233-5p 1 0 0
chr11:64219311|64219622 hsa-miR-3689b-3p 0 1 0
chr11:64219311|64219622 hsa-miR-4763-3p 1 0 0
chr11:64219311|64219622 hsa-miR-6778-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6787-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6870-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6775-5p 1 1 0
chr11:64219311|64219622 hsa-miR-1343-5p 1 1 0
chr11:64219311|64219622 hsa-miR-5001-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6737-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6743-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6752-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6754-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6756-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6803-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6851-5p 1 1 0
chr11:64219311|64219622 hsa-miR-7107-5p 1 1 0
chr11:64219311|64219622 hsa-miR-11181-3p 1 0 0
chr11:64219311|64219622 hsa-miR-6751-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6780a-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6797-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6879-5p 1 1 0
chr11:64219311|64219622 hsa-miR-7111-5p 1 1 0
chr11:64219311|64219622 hsa-miR-1915-3p 0 1 0
chr11:64219311|64219622 hsa-miR-3620-5p 1 0 0
chr11:64219311|64219622 hsa-miR-4728-5p 1 0 0
chr11:64219311|64219622 hsa-miR-10396a-5p 1 0 0
chr11:64219311|64219622 hsa-miR-10396b-5p 1 0 0
chr11:64219311|64219622 hsa-miR-3689a-3p 0 1 0
chr11:64219311|64219622 hsa-miR-4632-5p 0 1 0
chr11:64219311|64219622 hsa-miR-4685-5p 1 1 0
chr11:64219311|64219622 hsa-miR-4745-5p 1 1 0
chr11:64219311|64219622 hsa-miR-4749-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6735-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6777-5p 1 1 0
chr11:64219311|64219622 hsa-miR-6846-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6848-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6858-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6889-5p 1 1 0
chr11:64219311|64219622 hsa-miR-4436b-3p 0 1 0
chr11:64219311|64219622 hsa-miR-4723-5p 1 1 0
chr11:64219311|64219622 hsa-miR-1238-5p 0 1 0
chr11:64219311|64219622 hsa-miR-4758-5p 1 1 0
chr11:64219311|64219622 hsa-miR-1266-5p 0 1 0
chr11:64219311|64219622 hsa-miR-3085-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6799-3p 0 1 0
chr11:64219311|64219622 hsa-miR-7843-5p 0 1 0
chr11:64219311|64219622 hsa-miR-3173-3p 1 0 0
chr11:64219311|64219622 hsa-miR-4472 0 1 0
chr11:64219311|64219622 hsa-miR-541-3p 1 0 0
chr11:64219311|64219622 hsa-miR-3689d 0 1 0
chr11:64219311|64219622 hsa-miR-6791-5p 1 0 0
chr11:64219311|64219622 hsa-miR-6837-5p 0 1 0
chr11:64219311|64219622 hsa-miR-9851-3p 0 1 0
chr11:64219311|64219622 hsa-miR-4723-3p 0 1 0
chr11:64219311|64219622 hsa-miR-10394-5p 0 1 0
chr11:64219311|64219622 hsa-miR-4676-5p 0 1 0
chr11:64219311|64219622 hsa-miR-6764-5p 0 1 0
chr11:64219311|64219622 hsa-miR-99b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:64219311|64219622
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MEVAPTQEGPSCPGTGSPPTCPGAPRPAWYLQGGKHHHLLLGAVNL
Nucleotide Sequence CTGGAGGTAGCCCCCACTCAGGAAGGCCCTTCCTGCCCTGGGACTGGCTCACCTCCCACCTGCCCTGGTGCCCCCAGGCCCGCCTGGTACCTGCAGGGCGGCAAACACCATCATCTCCTCCTCGGTGCAGTCAATCTC
CircID chr11:64219311|64219622
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MLRATSRSSSPGSVPAGSPTSPLWDSLLMWY
Nucleotide Sequence TTGCTCAGGGCCACATCCAGGTCGTCCAGCCCTGGGTCTGTGCCAGCCGGCTCCCCCACCTCCCCGCTCTGGGACAGCTTGTTGATGTGGTACTAG
CircID chr11:64219311|64219622
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MGLAHLPPALVPPGPPGTCRAANTIISSSVQSI
Nucleotide Sequence CTGGGACTGGCTCACCTCCCACCTGCCCTGGTGCCCCCAGGCCCGCCTGGTACCTGCAGGGCGGCAAACACCATCATCTCCTCCTCGGTGCAGTCAATC
CircID chr11:64219311|64219622
ORF Type ORF4
Protein Length 62
Nucleotide Length 186
Protein Sequence MSPAAWSPSSTPRPGFPGGSPHSGRPFLPWDWLTSHLPWCPQARLVPAGRQTPSSPPRCSQS
Nucleotide Sequence CTGAGTCCAGCAGCCTGGTCCCCTAGCAGTACCCCCAGGCCGGGCTTCCCTGGAGGTAGCCCCCACTCAGGAAGGCCCTTCCTGCCCTGGGACTGGCTCACCTCCCACCTGCCCTGGTGCCCCCAGGCCCGCCTGGTACCTGCAGGGCGGCAAACACCATCATCTCCTCCTCGGTGCAGTCAATCT
CircID chr11:64219311|64219622
ORF Type ORF5
Protein Length 28
Nucleotide Length 84
Protein Sequence MSQSGEVGEPAGTDPGLDDLDVALSNLE
Nucleotide Sequence CTGTCCCAGAGCGGGGAGGTGGGGGAGCCGGCTGGCACAGACCCAGGGCTGGACGACCTGGATGTGGCCCTGAGCAACCTGGAG
CircID chr11:64219311|64219622
ORF Type ORF6
Protein Length 28
Nucleotide Length 87
Protein Sequence MPPCRYQAGLGAPGQVGGEPVPGQEGPS
Nucleotide Sequence TTGCCGCCCTGCAGGTACCAGGCGGGCCTGGGGGCACCAGGGCAGGTGGGAGGTGAGCCAGTCCCAGGGCAGGAAGGGCCTTCCTGA
CircID chr11:64219311|64219622
ORF Type ORF7
Protein Length 101
Nucleotide Length 303
Protein Sequence MHRGGDDGVCRPAGTRRAWGHQGRWEVSQSQGRKGLPEWGLPPGKPGLGVLLGDQAAGLSPPWLHDHLVPHQQAVPERGGGGAGWHRPRAGRPGCGPEQPG
Nucleotide Sequence CTGCACCGAGGAGGAGATGATGGTGTTTGCCGCCCTGCAGGTACCAGGCGGGCCTGGGGGCACCAGGGCAGGTGGGAGGTGAGCCAGTCCCAGGGCAGGAAGGGCCTTCCTGAGTGGGGGCTACCTCCAGGGAAGCCCGGCCTGGGGGTACTGCTAGGGGACCAGGCTGCTGGACTCAGCCCTCCCTGGCTTCATGACCACCTAGTACCACATCAACAAGCTGTCCCAGAGCGGGGAGGTGGGGGAGCCGGCTGGCACAGACCCAGGGCTGGACGACCTGGATGTGGCCCTGAGCAACCTGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab