CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64258885|64259103
Strand +
CircType exon
Host Gene ENSG00000149782.10;
Algorism CIRI2;
Sequence GGCCCATCAGGTCCTGGGGGCTGGGCAGGGGAACGCCTGGGGCCAGCTGGGCAGGCATGGACGAGTCAGGGCCCTGGACCGGGTCCGCAGCACCCTGGCCCCCATGCCACCCCCCTCGCTCCGAGCTCCCGTACCGGGTACTTGTCCAGAGGCTCGATGAGTAGCGCGTCTCCAAAGATGGAGCGGCAGTACTCAGCCATCTTTGCCTGTTGCTTTGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64258885|64259103 hsa-miR-345-5p 0 0 1
chr11:64258885|64259103 hsa-miR-345-3p 0 0 1
chr11:64258885|64259103 hsa-miR-422a 0 0 1
chr11:64258885|64259103 hsa-miR-492 0 0 1
chr11:64258885|64259103 hsa-miR-608 0 1 1
chr11:64258885|64259103 hsa-miR-620 0 0 1
chr11:64258885|64259103 hsa-miR-920 0 0 1
chr11:64258885|64259103 hsa-miR-1291 0 1 1
chr11:64258885|64259103 hsa-miR-1270 0 0 1
chr11:64258885|64259103 hsa-miR-1278 0 1 1
chr11:64258885|64259103 hsa-miR-139-3p 1 1 1
chr11:64258885|64259103 hsa-miR-941 0 0 1
chr11:64258885|64259103 hsa-miR-330-3p 0 1 1
chr11:64258885|64259103 hsa-miR-361-3p 0 1 1
chr11:64258885|64259103 hsa-miR-1207-3p 0 1 1
chr11:64258885|64259103 hsa-miR-331-3p 0 0 1
chr11:64258885|64259103 hsa-miR-9 0 0 1
chr11:64258885|64259103 hsa-miR-378 0 0 1
chr11:64258885|64259103 hsa-miR-768-5p 0 0 1
chr11:64258885|64259103 hsa-miR-596 1 1 0
chr11:64258885|64259103 hsa-miR-623 1 0 0
chr11:64258885|64259103 hsa-miR-3943 0 1 0
chr11:64258885|64259103 hsa-miR-4466 1 0 0
chr11:64258885|64259103 hsa-miR-4647 0 1 0
chr11:64258885|64259103 hsa-miR-4651 0 1 0
chr11:64258885|64259103 hsa-miR-4734 1 1 0
chr11:64258885|64259103 hsa-miR-4754 0 1 0
chr11:64258885|64259103 hsa-miR-6090 1 0 0
chr11:64258885|64259103 hsa-miR-12131 0 1 0
chr11:64258885|64259103 hsa-miR-6840-3p 0 1 0
chr11:64258885|64259103 hsa-miR-4726-3p 0 1 0
chr11:64258885|64259103 hsa-miR-210-5p 1 1 0
chr11:64258885|64259103 hsa-miR-6746-5p 1 0 0
chr11:64258885|64259103 hsa-miR-6727-5p 1 1 0
chr11:64258885|64259103 hsa-miR-3622b-5p 1 1 0
chr11:64258885|64259103 hsa-miR-8069 0 1 0
chr11:64258885|64259103 hsa-miR-1915-5p 1 1 0
chr11:64258885|64259103 hsa-miR-6871-5p 1 1 0
chr11:64258885|64259103 hsa-miR-4633-5p 0 1 0
chr11:64258885|64259103 hsa-miR-4763-5p 1 1 0
chr11:64258885|64259103 hsa-miR-6763-3p 1 0 0
chr11:64258885|64259103 hsa-miR-4783-3p 1 1 0
chr11:64258885|64259103 hsa-miR-6784-5p 1 0 0
chr11:64258885|64259103 hsa-miR-6894-3p 0 1 0
chr11:64258885|64259103 hsa-miR-4640-5p 0 1 0
chr11:64258885|64259103 hsa-miR-7113-3p 1 0 0
chr11:64258885|64259103 hsa-miR-4690-5p 1 1 0
chr11:64258885|64259103 hsa-miR-92b-5p 1 0 0
chr11:64258885|64259103 hsa-miR-4446-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6824-5p 1 0 0
chr11:64258885|64259103 hsa-miR-7160-3p 0 1 0
chr11:64258885|64259103 hsa-miR-1225-5p 1 0 0
chr11:64258885|64259103 hsa-miR-4742-5p 0 1 0
chr11:64258885|64259103 hsa-miR-4732-3p 0 1 0
chr11:64258885|64259103 hsa-miR-6872-3p 0 1 0
chr11:64258885|64259103 hsa-miR-1296-5p 0 1 0
chr11:64258885|64259103 hsa-miR-214-3p 1 0 0
chr11:64258885|64259103 hsa-miR-2114-3p 0 1 0
chr11:64258885|64259103 hsa-miR-1914-5p 1 0 0
chr11:64258885|64259103 hsa-miR-767-3p 0 1 0
chr11:64258885|64259103 hsa-miR-5581-3p 0 1 0
chr11:64258885|64259103 hsa-miR-16-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6726-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6752-5p 1 1 0
chr11:64258885|64259103 hsa-miR-6803-5p 1 1 0
chr11:64258885|64259103 hsa-miR-6842-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6751-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6836-5p 1 0 0
chr11:64258885|64259103 hsa-miR-328-5p 1 0 0
chr11:64258885|64259103 hsa-miR-4685-5p 0 1 0
chr11:64258885|64259103 hsa-miR-4726-5p 0 1 0
chr11:64258885|64259103 hsa-miR-675-5p 1 0 0
chr11:64258885|64259103 hsa-miR-6848-5p 1 0 0
chr11:64258885|64259103 hsa-miR-939-5p 1 0 0
chr11:64258885|64259103 hsa-miR-6511b-5p 1 0 0
chr11:64258885|64259103 hsa-miR-4665-5p 1 0 0
chr11:64258885|64259103 hsa-miR-5591-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6762-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6801-3p 0 1 0
chr11:64258885|64259103 hsa-miR-6805-3p 1 0 0
chr11:64258885|64259103 hsa-miR-6810-3p 1 0 0
chr11:64258885|64259103 hsa-miR-6837-5p 0 1 0
chr11:64258885|64259103 hsa-miR-6775-3p 0 1 0
chr11:64258885|64259103 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:64258885|64259103
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MGPAGQAWTSQGPGPGPQHPGPHATPLAPSSRTGYLSRGSMSSASPKMERQYSAIFACCFA
Nucleotide Sequence CTGGGGCCAGCTGGGCAGGCATGGACGAGTCAGGGCCCTGGACCGGGTCCGCAGCACCCTGGCCCCCATGCCACCCCCCTCGCTCCGAGCTCCCGTACCGGGTACTTGTCCAGAGGCTCGATGAGTAGCGCGTCTCCAAAGATGGAGCGGCAGTACTCAGCCATCTTTGCCTGTTGCTTTGCC
CircID chr11:64258885|64259103
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MGAGQGNAWGQLGRHGRVRALDRVRSTLAPMPPPSLRAPVPGTCPEAR
Nucleotide Sequence CTGGGGGCTGGGCAGGGGAACGCCTGGGGCCAGCTGGGCAGGCATGGACGAGTCAGGGCCCTGGACCGGGTCCGCAGCACCCTGGCCCCCATGCCACCCCCCTCGCTCCGAGCTCCCGTACCGGGTACTTGTCCAGAGGCTCGATGA
CircID chr11:64258885|64259103
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MGRGTPGASWAGMDESGPWTGSAAPWPPCHPPRSELPYRVLVQRLDE
Nucleotide Sequence CTGGGCAGGGGAACGCCTGGGGCCAGCTGGGCAGGCATGGACGAGTCAGGGCCCTGGACCGGGTCCGCAGCACCCTGGCCCCCATGCCACCCCCCTCGCTCCGAGCTCCCGTACCGGGTACTTGTCCAGAGGCTCGATGAGTAG
CircID chr11:64258885|64259103
ORF Type ORF4
Protein Length 60
Nucleotide Length 183
Protein Sequence MPLHLWRRATHRASGQVPGTGARSEGGGMGARVLRTRSRALTRPCLPSWPQAFPCPAPRT
Nucleotide Sequence CTGCCGCTCCATCTTTGGAGACGCGCTACTCATCGAGCCTCTGGACAAGTACCCGGTACGGGAGCTCGGAGCGAGGGGGGTGGCATGGGGGCCAGGGTGCTGCGGACCCGGTCCAGGGCCCTGACTCGTCCATGCCTGCCCAGCTGGCCCCAGGCGTTCCCCTGCCCAGCCCCCAGGACCTGA
CircID chr11:64258885|64259103
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MAEYCRSIFGDALLIEPLDKYPVRELGARGVAWGPGCCGPGPGP
Nucleotide Sequence ATGGCTGAGTACTGCCGCTCCATCTTTGGAGACGCGCTACTCATCGAGCCTCTGGACAAGTACCCGGTACGGGAGCTCGGAGCGAGGGGGGTGGCATGGGGGCCAGGGTGCTGCGGACCCGGTCCAGGGCCCTGA
CircID chr11:64258885|64259103
ORF Type ORF6
Protein Length 65
Nucleotide Length 195
Protein Sequence MSTAAPSLETRYSSSLWTSTRYGSSERGGWHGGQGAADPVQGPDSSMPAQLAPGVPLPSPQDLMG
Nucleotide Sequence CTGAGTACTGCCGCTCCATCTTTGGAGACGCGCTACTCATCGAGCCTCTGGACAAGTACCCGGTACGGGAGCTCGGAGCGAGGGGGGTGGCATGGGGGCCAGGGTGCTGCGGACCCGGTCCAGGGCCCTGACTCGTCCATGCCTGCCCAGCTGGCCCCAGGCGTTCCCCTGCCCAGCCCCCAGGACCTGATGGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab