CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64312940|64313129
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTTGACCTGATAGTCACTGTCACCTCGCCCCTCGCTTGGCTGTCCCTGCTTGCTCCAGTCTGTTCTCGACTCAGCAGCCAAGAGGGTCCTATTAAGCCTCCATTACATCCTGTACCTCCTCTTCTCAAAACCCTCTGGGGATTTCCCTTCTCTGAGTCCAAGCCAAAGCGAACCTATGTCCTCCTAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64312940|64313129 hsa-miR-380-5p 0 0 1
chr11:64312940|64313129 hsa-miR-380-3p 0 0 1
chr11:64312940|64313129 hsa-miR-580-5p 0 0 1
chr11:64312940|64313129 hsa-miR-580-3p 0 0 1
chr11:64312940|64313129 hsa-miR-604 0 0 1
chr11:64312940|64313129 hsa-miR-605-5p 0 0 1
chr11:64312940|64313129 hsa-miR-605-3p 0 0 1
chr11:64312940|64313129 hsa-miR-633 0 0 1
chr11:64312940|64313129 hsa-miR-647 0 0 1
chr11:64312940|64313129 hsa-miR-650 0 0 1
chr11:64312940|64313129 hsa-miR-1253 0 0 1
chr11:64312940|64313129 hsa-miR-1265 0 1 1
chr11:64312940|64313129 hsa-miR-423-5p 1 1 1
chr11:64312940|64313129 hsa-miR-542-3p 0 0 1
chr11:64312940|64313129 hsa-miR-1269 0 0 1
chr11:64312940|64313129 hsa-miR-1300 0 0 1
chr11:64312940|64313129 hsa-miR-601 1 0 0
chr11:64312940|64313129 hsa-miR-608 1 0 0
chr11:64312940|64313129 hsa-miR-638 1 0 0
chr11:64312940|64313129 hsa-miR-765 1 0 0
chr11:64312940|64313129 hsa-miR-1182 1 0 0
chr11:64312940|64313129 hsa-miR-1268a 1 0 0
chr11:64312940|64313129 hsa-miR-3131 1 0 0
chr11:64312940|64313129 hsa-miR-3132 1 0 0
chr11:64312940|64313129 hsa-miR-3138 1 0 0
chr11:64312940|64313129 hsa-miR-3154 1 1 0
chr11:64312940|64313129 hsa-miR-3175 1 0 0
chr11:64312940|64313129 hsa-miR-3197 1 0 0
chr11:64312940|64313129 hsa-miR-4298 1 0 0
chr11:64312940|64313129 hsa-miR-4266 0 1 0
chr11:64312940|64313129 hsa-miR-4270 1 0 0
chr11:64312940|64313129 hsa-miR-4271 1 0 0
chr11:64312940|64313129 hsa-miR-3665 1 0 0
chr11:64312940|64313129 hsa-miR-3945 1 0 0
chr11:64312940|64313129 hsa-miR-1268b 1 0 0
chr11:64312940|64313129 hsa-miR-4430 0 1 0
chr11:64312940|64313129 hsa-miR-4463 0 1 0
chr11:64312940|64313129 hsa-miR-4494 0 1 0
chr11:64312940|64313129 hsa-miR-2392 1 0 0
chr11:64312940|64313129 hsa-miR-4507 1 0 0
chr11:64312940|64313129 hsa-miR-4510 1 0 0
chr11:64312940|64313129 hsa-miR-4688 1 0 0
chr11:64312940|64313129 hsa-miR-4689 1 0 0
chr11:64312940|64313129 hsa-miR-4739 1 0 0
chr11:64312940|64313129 hsa-miR-4751 1 0 0
chr11:64312940|64313129 hsa-miR-4784 1 0 0
chr11:64312940|64313129 hsa-miR-4785 1 0 0
chr11:64312940|64313129 hsa-miR-5090 1 0 0
chr11:64312940|64313129 hsa-miR-5190 0 1 0
chr11:64312940|64313129 hsa-miR-5194 1 0 0
chr11:64312940|64313129 hsa-miR-6077 1 0 0
chr11:64312940|64313129 hsa-miR-6090 1 0 0
chr11:64312940|64313129 hsa-miR-6127 1 0 0
chr11:64312940|64313129 hsa-miR-6129 1 0 0
chr11:64312940|64313129 hsa-miR-6134 1 0 0
chr11:64312940|64313129 hsa-miR-6165 1 0 0
chr11:64312940|64313129 hsa-miR-8072 1 0 0
chr11:64312940|64313129 hsa-miR-8077 0 1 0
chr11:64312940|64313129 hsa-miR-12114 1 0 0
chr11:64312940|64313129 hsa-miR-12128 0 1 0
chr11:64312940|64313129 hsa-miR-211-3p 1 1 0
chr11:64312940|64313129 hsa-miR-150-3p 1 0 0
chr11:64312940|64313129 hsa-miR-4433b-3p 1 0 0
chr11:64312940|64313129 hsa-miR-510-5p 0 1 0
chr11:64312940|64313129 hsa-miR-7106-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6825-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6894-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4687-3p 1 0 0
chr11:64312940|64313129 hsa-miR-6799-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6510-5p 1 1 0
chr11:64312940|64313129 hsa-miR-766-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4786-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6880-5p 1 0 0
chr11:64312940|64313129 hsa-miR-7847-3p 1 0 0
chr11:64312940|64313129 hsa-miR-4695-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4709-3p 1 1 0
chr11:64312940|64313129 hsa-miR-7154-3p 1 1 0
chr11:64312940|64313129 hsa-miR-197-5p 1 0 0
chr11:64312940|64313129 hsa-miR-7845-5p 1 1 0
chr11:64312940|64313129 hsa-miR-6772-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6829-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6732-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6798-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6881-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6782-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6810-5p 1 0 0
chr11:64312940|64313129 hsa-miR-30b-3p 1 0 0
chr11:64312940|64313129 hsa-miR-6835-5p 1 0 0
chr11:64312940|64313129 hsa-miR-5088-5p 1 0 0
chr11:64312940|64313129 hsa-miR-1226-5p 1 0 0
chr11:64312940|64313129 hsa-miR-193b-5p 1 1 0
chr11:64312940|64313129 hsa-miR-1908-5p 1 0 0
chr11:64312940|64313129 hsa-miR-296-3p 1 0 0
chr11:64312940|64313129 hsa-let-7b-5p 1 0 0
chr11:64312940|64313129 hsa-miR-92b-5p 1 0 0
chr11:64312940|64313129 hsa-miR-877-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4717-3p 1 0 0
chr11:64312940|64313129 hsa-miR-149-3p 1 0 0
chr11:64312940|64313129 hsa-miR-937-5p 1 0 0
chr11:64312940|64313129 hsa-miR-202-3p 1 0 0
chr11:64312940|64313129 hsa-miR-6824-5p 1 0 0
chr11:64312940|64313129 hsa-let-7c-5p 1 0 0
chr11:64312940|64313129 hsa-let-7e-5p 1 0 0
chr11:64312940|64313129 hsa-miR-214-3p 0 1 0
chr11:64312940|64313129 hsa-miR-6501-3p 1 0 0
chr11:64312940|64313129 hsa-miR-4802-5p 0 1 0
chr11:64312940|64313129 hsa-miR-1207-5p 1 0 0
chr11:64312940|64313129 hsa-miR-1273h-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4763-3p 1 0 0
chr11:64312940|64313129 hsa-miR-6778-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6816-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6870-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6743-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6752-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6813-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6851-5p 1 0 0
chr11:64312940|64313129 hsa-miR-7110-5p 1 0 0
chr11:64312940|64313129 hsa-miR-11181-3p 1 0 0
chr11:64312940|64313129 hsa-miR-6722-3p 1 0 0
chr11:64312940|64313129 hsa-miR-6774-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6779-5p 1 1 0
chr11:64312940|64313129 hsa-miR-6797-5p 1 0 0
chr11:64312940|64313129 hsa-miR-328-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4632-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4649-5p 1 1 0
chr11:64312940|64313129 hsa-miR-4745-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4749-5p 1 1 0
chr11:64312940|64313129 hsa-miR-6729-5p 1 1 0
chr11:64312940|64313129 hsa-miR-6794-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6795-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6848-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6858-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6887-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6831-5p 1 0 0
chr11:64312940|64313129 hsa-miR-939-5p 1 0 0
chr11:64312940|64313129 hsa-miR-3940-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6758-5p 1 1 0
chr11:64312940|64313129 hsa-miR-6856-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4665-5p 1 0 0
chr11:64312940|64313129 hsa-miR-3679-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4646-5p 1 0 0
chr11:64312940|64313129 hsa-miR-4716-3p 1 0 0
chr11:64312940|64313129 hsa-miR-6750-5p 1 0 0
chr11:64312940|64313129 hsa-miR-6859-5p 1 0 0
chr11:64312940|64313129 hsa-miR-2682-5p 1 0 0
chr11:64312940|64313129 hsa-miR-7153-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:64312940|64313129
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MIVTVTSPLAWLSLLAPVCSRLSSQEGPIKPPLHPVPPLLKTLWGFPFSESKPKRTYVLLG
Nucleotide Sequence CTGATAGTCACTGTCACCTCGCCCCTCGCTTGGCTGTCCCTGCTTGCTCCAGTCTGTTCTCGACTCAGCAGCCAAGAGGGTCCTATTAAGCCTCCATTACATCCTGTACCTCCTCTTCTCAAAACCCTCTGGGGATTTCCCTTCTCTGAGTCCAAGCCAAAGCGAACCTATGTCCTCCTAGGC
CircID chr11:64312940|64313129
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MSPRPSLGCPCLLQSVLDSAAKRVLLSLHYILYLLFSKPSGDFPSLSPSQSEPMSS
Nucleotide Sequence CTGTCACCTCGCCCCTCGCTTGGCTGTCCCTGCTTGCTCCAGTCTGTTCTCGACTCAGCAGCCAAGAGGGTCCTATTAAGCCTCCATTACATCCTGTACCTCCTCTTCTCAAAACCCTCTGGGGATTTCCCTTCTCTGAGTCCAAGCCAAAGCGAACCTATGTCCTCCTAG
CircID chr11:64312940|64313129
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MAAESRTDWSKQGQPSEGRGDSDYQVK
Nucleotide Sequence TTGGCTGCTGAGTCGAGAACAGACTGGAGCAAGCAGGGACAGCCAAGCGAGGGGCGAGGTGACAGTGACTATCAGGTCAAG
CircID chr11:64312940|64313129
ORF Type ORF4
Protein Length 54
Nucleotide Length 162
Protein Sequence MDSEKGNPQRVLRRGGTGCNGGLIGPSWLLSREQTGASRDSQARGEVTVTIRSR
Nucleotide Sequence TTGGACTCAGAGAAGGGAAATCCCCAGAGGGTTTTGAGAAGAGGAGGTACAGGATGTAATGGAGGCTTAATAGGACCCTCTTGGCTGCTGAGTCGAGAACAGACTGGAGCAAGCAGGGACAGCCAAGCGAGGGGCGAGGTGACAGTGACTATCAGGTCAAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab