CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64320713|64321068
Strand +
CircType exon
Host Gene ENSG00000126432.12;
Algorism CIRI2;
Sequence CTCTTGAGACGTCGATTCCCAAAGATGGACACCAGCGAATCATCTAGTAATAAGTCTGTCTCCTAAGAAGAGACAGAGAAAAGTGTCAGAAATCCTTGAAGAGGCTAAGGGCCCCCACTGCTCCCCGCACTGCCATGTCCCTGTGGCGGTCAGGGGAACACTCACCTTCCCAAAGGCCCCAGTGGGATCAGCCAGGAGCCGAACCTGCAGAGAAAGTAAAGGTCACAAGAAGAATATCCTACCTGGTCCTGACTCCCTGCAGGCCCCTCACCTCACCTTGCCTTCCGCCTTGTGGGCTCGGCCCCACTCGCCAGTCACAAAGGCATCATTAACACTCAGACAGGCCACCACCTGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64320713|64321068 hsa-miR-34a-5p 0 0 1
chr11:64320713|64321068 hsa-miR-34a-3p 0 0 1
chr11:64320713|64321068 hsa-miR-134-5p 0 0 1
chr11:64320713|64321068 hsa-miR-134-3p 0 0 1
chr11:64320713|64321068 hsa-miR-335-5p 0 0 1
chr11:64320713|64321068 hsa-miR-335-3p 0 0 1
chr11:64320713|64321068 hsa-miR-449a 0 0 1
chr11:64320713|64321068 hsa-miR-569 0 0 1
chr11:64320713|64321068 hsa-miR-578 0 1 1
chr11:64320713|64321068 hsa-miR-581 0 0 1
chr11:64320713|64321068 hsa-miR-593-5p 0 0 1
chr11:64320713|64321068 hsa-miR-593-3p 0 0 1
chr11:64320713|64321068 hsa-miR-639 0 0 1
chr11:64320713|64321068 hsa-miR-449b-5p 0 0 1
chr11:64320713|64321068 hsa-miR-449b-3p 0 0 1
chr11:64320713|64321068 hsa-miR-657 0 1 1
chr11:64320713|64321068 hsa-miR-758-5p 0 0 1
chr11:64320713|64321068 hsa-miR-758-3p 0 0 1
chr11:64320713|64321068 hsa-miR-744-5p 0 0 1
chr11:64320713|64321068 hsa-miR-744-3p 0 0 1
chr11:64320713|64321068 hsa-miR-938 0 0 1
chr11:64320713|64321068 hsa-miR-939-5p 0 0 1
chr11:64320713|64321068 hsa-miR-939-3p 0 0 1
chr11:64320713|64321068 hsa-miR-1236-5p 0 0 1
chr11:64320713|64321068 hsa-miR-1236-3p 0 0 1
chr11:64320713|64321068 hsa-miR-1205 0 1 1
chr11:64320713|64321068 hsa-miR-1294 0 0 1
chr11:64320713|64321068 hsa-miR-513c-5p 0 0 1
chr11:64320713|64321068 hsa-miR-513c-3p 0 0 1
chr11:64320713|64321068 hsa-miR-1322 0 0 1
chr11:64320713|64321068 hsa-miR-28-3p 0 0 1
chr11:64320713|64321068 hsa-miR-615-3p 0 0 1
chr11:64320713|64321068 hsa-miR-1184 0 0 1
chr11:64320713|64321068 hsa-miR-574-5p 0 0 1
chr11:64320713|64321068 hsa-miR-423-5p 0 1 1
chr11:64320713|64321068 hsa-miR-532-5p 0 0 1
chr11:64320713|64321068 hsa-miR-331-3p 0 0 1
chr11:64320713|64321068 hsa-miR-34c-5p 0 1 1
chr11:64320713|64321068 hsa-miR-876-5p 0 0 1
chr11:64320713|64321068 hsa-miR-556-3p 0 0 1
chr11:64320713|64321068 hsa-miR-220c 0 0 1
chr11:64320713|64321068 hsa-miR-9 0 0 1
chr11:64320713|64321068 hsa-miR-138 0 0 1
chr11:64320713|64321068 hsa-miR-637 1 1 0
chr11:64320713|64321068 hsa-miR-658 1 0 0
chr11:64320713|64321068 hsa-miR-1182 1 0 0
chr11:64320713|64321068 hsa-miR-1293 1 0 0
chr11:64320713|64321068 hsa-miR-2861 0 1 0
chr11:64320713|64321068 hsa-miR-3141 1 0 0
chr11:64320713|64321068 hsa-miR-3197 1 0 0
chr11:64320713|64321068 hsa-miR-4270 1 1 0
chr11:64320713|64321068 hsa-miR-3652 1 0 0
chr11:64320713|64321068 hsa-miR-4421 0 1 0
chr11:64320713|64321068 hsa-miR-4447 0 1 0
chr11:64320713|64321068 hsa-miR-4466 1 0 0
chr11:64320713|64321068 hsa-miR-4519 0 1 0
chr11:64320713|64321068 hsa-miR-4656 1 1 0
chr11:64320713|64321068 hsa-miR-4688 1 0 0
chr11:64320713|64321068 hsa-miR-4706 1 1 0
chr11:64320713|64321068 hsa-miR-4710 1 1 0
chr11:64320713|64321068 hsa-miR-4734 1 0 0
chr11:64320713|64321068 hsa-miR-4739 1 0 0
chr11:64320713|64321068 hsa-miR-5572 1 0 0
chr11:64320713|64321068 hsa-miR-5787 1 0 0
chr11:64320713|64321068 hsa-miR-6081 1 1 0
chr11:64320713|64321068 hsa-miR-6125 1 1 0
chr11:64320713|64321068 hsa-miR-8056 1 0 0
chr11:64320713|64321068 hsa-miR-8072 1 0 0
chr11:64320713|64321068 hsa-miR-8089 1 0 0
chr11:64320713|64321068 hsa-miR-12114 1 0 0
chr11:64320713|64321068 hsa-miR-211-3p 0 1 0
chr11:64320713|64321068 hsa-miR-6809-5p 0 1 0
chr11:64320713|64321068 hsa-miR-6825-5p 1 0 0
chr11:64320713|64321068 hsa-miR-125a-3p 1 1 0
chr11:64320713|64321068 hsa-miR-8071 1 0 0
chr11:64320713|64321068 hsa-miR-1227-5p 0 1 0
chr11:64320713|64321068 hsa-miR-4695-5p 1 0 0
chr11:64320713|64321068 hsa-miR-4474-3p 0 1 0
chr11:64320713|64321068 hsa-miR-7845-5p 0 1 0
chr11:64320713|64321068 hsa-miR-7108-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6742-5p 0 1 0
chr11:64320713|64321068 hsa-miR-3180-3p 1 0 0
chr11:64320713|64321068 hsa-miR-6732-5p 1 0 0
chr11:64320713|64321068 hsa-miR-656-5p 1 0 0
chr11:64320713|64321068 hsa-miR-3190-3p 1 0 0
chr11:64320713|64321068 hsa-miR-6782-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6786-5p 1 0 0
chr11:64320713|64321068 hsa-miR-1226-5p 1 0 0
chr11:64320713|64321068 hsa-miR-30c-2-3p 0 1 0
chr11:64320713|64321068 hsa-miR-7161-3p 1 0 0
chr11:64320713|64321068 hsa-miR-6771-5p 1 0 0
chr11:64320713|64321068 hsa-miR-4743-3p 0 1 0
chr11:64320713|64321068 hsa-miR-6818-3p 0 1 0
chr11:64320713|64321068 hsa-miR-149-3p 1 0 0
chr11:64320713|64321068 hsa-miR-3162-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6802-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6877-5p 0 1 0
chr11:64320713|64321068 hsa-miR-194-3p 0 1 0
chr11:64320713|64321068 hsa-miR-483-5p 1 0 0
chr11:64320713|64321068 hsa-miR-3151-3p 0 1 0
chr11:64320713|64321068 hsa-miR-1296-3p 0 1 0
chr11:64320713|64321068 hsa-miR-4524a-3p 0 1 0
chr11:64320713|64321068 hsa-miR-6759-3p 0 1 0
chr11:64320713|64321068 hsa-miR-499b-5p 0 1 0
chr11:64320713|64321068 hsa-miR-6808-3p 1 1 0
chr11:64320713|64321068 hsa-miR-1207-5p 1 1 0
chr11:64320713|64321068 hsa-miR-4763-3p 1 0 0
chr11:64320713|64321068 hsa-miR-6812-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6775-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6737-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6743-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6754-5p 0 1 0
chr11:64320713|64321068 hsa-miR-6756-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6813-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6819-5p 1 0 0
chr11:64320713|64321068 hsa-miR-10401-5p 0 1 0
chr11:64320713|64321068 hsa-miR-1249-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6722-3p 1 0 0
chr11:64320713|64321068 hsa-miR-6797-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6808-5p 1 1 0
chr11:64320713|64321068 hsa-miR-7111-5p 1 0 0
chr11:64320713|64321068 hsa-miR-5196-5p 0 1 0
chr11:64320713|64321068 hsa-miR-6780b-5p 1 0 0
chr11:64320713|64321068 hsa-miR-328-5p 1 1 0
chr11:64320713|64321068 hsa-miR-4649-5p 1 0 0
chr11:64320713|64321068 hsa-miR-4725-3p 1 0 0
chr11:64320713|64321068 hsa-miR-4745-5p 1 1 0
chr11:64320713|64321068 hsa-miR-4749-5p 1 1 0
chr11:64320713|64321068 hsa-miR-6729-5p 0 1 0
chr11:64320713|64321068 hsa-miR-6735-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6777-5p 1 1 0
chr11:64320713|64321068 hsa-miR-6848-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6889-5p 1 1 0
chr11:64320713|64321068 hsa-miR-4758-5p 1 0 0
chr11:64320713|64321068 hsa-miR-6511a-5p 1 0 0
chr11:64320713|64321068 hsa-miR-1914-3p 1 0 0
chr11:64320713|64321068 hsa-miR-6736-5p 1 0 0
chr11:64320713|64321068 hsa-miR-3173-3p 1 0 0
chr11:64320713|64321068 hsa-miR-6785-5p 1 0 0
chr11:64320713|64321068 hsa-miR-3184-5p 0 1 0
chr11:64320713|64321068 hsa-miR-6790-5p 1 1 0
chr11:64320713|64321068 hsa-miR-2682-3p 1 1 0
chr11:64320713|64321068 hsa-miR-6753-3p 1 0 0
chr11:64320713|64321068 hsa-miR-3059-5p 0 1 0
chr11:64320713|64321068 hsa-miR-10394-5p 1 1 0
chr11:64320713|64321068 hsa-miR-128-2-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:64320713|64321068
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MLPALPCPCGGQGNTHLPKGPSGISQEPNLQRK
Nucleotide Sequence CTGCTCCCCGCACTGCCATGTCCCTGTGGCGGTCAGGGGAACACTCACCTTCCCAAAGGCCCCAGTGGGATCAGCCAGGAGCCGAACCTGCAGAGAAAGTAA
CircID chr11:64320713|64321068
ORF Type ORF2
Protein Length 100
Nucleotide Length 300
Protein Sequence MSPKKRQRKVSEILEEAKGPHCSPHCHVPVAVRGTLTFPKAPVGSARSRTCRESKGHKKNILPGPDSLQAPHLTLPSALWARPHSPVTKASLTLRQATTW
Nucleotide Sequence CTGTCTCCTAAGAAGAGACAGAGAAAAGTGTCAGAAATCCTTGAAGAGGCTAAGGGCCCCCACTGCTCCCCGCACTGCCATGTCCCTGTGGCGGTCAGGGGAACACTCACCTTCCCAAAGGCCCCAGTGGGATCAGCCAGGAGCCGAACCTGCAGAGAAAGTAAAGGTCACAAGAAGAATATCCTACCTGGTCCTGACTCCCTGCAGGCCCCTCACCTCACCTTGCCTTCCGCCTTGTGGGCTCGGCCCCACTCGCCAGTCACAAAGGCATCATTAACACTCAGACAGGCCACCACCTGG
CircID chr11:64320713|64321068
ORF Type ORF3
Protein Length 78
Nucleotide Length 237
Protein Sequence MKRLRAPTAPRTAMSLWRSGEHSPSQRPQWDQPGAEPAEKVKVTRRISYLVLTPCRPLTSPCLPPCGLGPTRQSQRHH
Nucleotide Sequence TTGAAGAGGCTAAGGGCCCCCACTGCTCCCCGCACTGCCATGTCCCTGTGGCGGTCAGGGGAACACTCACCTTCCCAAAGGCCCCAGTGGGATCAGCCAGGAGCCGAACCTGCAGAGAAAGTAAAGGTCACAAGAAGAATATCCTACCTGGTCCTGACTCCCTGCAGGCCCCTCACCTCACCTTGCCTTCCGCCTTGTGGGCTCGGCCCCACTCGCCAGTCACAAAGGCATCATTAA
CircID chr11:64320713|64321068
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MQVRLLADPTGAFGKVSVPLTATGTWQCGEQWGPLASSRISDTFLCLFLGDRLITR
Nucleotide Sequence CTGCAGGTTCGGCTCCTGGCTGATCCCACTGGGGCCTTTGGGAAGGTGAGTGTTCCCCTGACCGCCACAGGGACATGGCAGTGCGGGGAGCAGTGGGGGCCCTTAGCCTCTTCAAGGATTTCTGACACTTTTCTCTGTCTCTTCTTAGGAGACAGACTTATTACTAGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab