CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64341294|64341504
Strand +
CircType exon
Host Gene ENSG00000168071.20;
Algorism CIRI2;
Sequence CTCCTGGATGGCAGCGGCCAGCTCGCTCTGGACCTCGAGACTGAGGCCCTGGATGTGGCGGATGAAGAGTTCCCGGTGCTCACACTGAGGGGAGACAGGAAGGGGAGCTGGTGCAGGATCTCCCTCCTCTACCGCCAAAGCTCGACCCTAACCTTTCCTTCCCACCGCCGGCTCACCTGTACTGACGCTCCCAACAGTAGCCGAAGAACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64341294|64341504 hsa-miR-198 0 1 1
chr11:64341294|64341504 hsa-miR-452-5p 0 0 1
chr11:64341294|64341504 hsa-miR-452-3p 0 0 1
chr11:64341294|64341504 hsa-miR-552-5p 0 0 1
chr11:64341294|64341504 hsa-miR-552-3p 0 0 1
chr11:64341294|64341504 hsa-miR-622 0 0 1
chr11:64341294|64341504 hsa-miR-877-5p 0 0 1
chr11:64341294|64341504 hsa-miR-877-3p 0 0 1
chr11:64341294|64341504 hsa-miR-665 0 0 1
chr11:64341294|64341504 hsa-miR-920 0 0 1
chr11:64341294|64341504 hsa-miR-1182 1 0 1
chr11:64341294|64341504 hsa-miR-1226-5p 0 0 1
chr11:64341294|64341504 hsa-miR-1226-3p 0 0 1
chr11:64341294|64341504 hsa-miR-1252-5p 0 0 1
chr11:64341294|64341504 hsa-miR-1252-3p 0 0 1
chr11:64341294|64341504 hsa-miR-125a-3p 0 1 1
chr11:64341294|64341504 hsa-miR-767-5p 0 0 1
chr11:64341294|64341504 hsa-miR-525-5p 0 0 1
chr11:64341294|64341504 hsa-miR-516a-5p 0 0 1
chr11:64341294|64341504 hsa-miR-520a-5p 0 0 1
chr11:64341294|64341504 hsa-miR-658 1 0 0
chr11:64341294|64341504 hsa-miR-1183 1 0 0
chr11:64341294|64341504 hsa-miR-3918 0 1 0
chr11:64341294|64341504 hsa-miR-4425 0 1 0
chr11:64341294|64341504 hsa-miR-4476 1 0 0
chr11:64341294|64341504 hsa-miR-4487 0 1 0
chr11:64341294|64341504 hsa-miR-2392 1 0 0
chr11:64341294|64341504 hsa-miR-4512 0 1 0
chr11:64341294|64341504 hsa-miR-4533 0 1 0
chr11:64341294|64341504 hsa-miR-4651 1 0 0
chr11:64341294|64341504 hsa-miR-4656 1 0 0
chr11:64341294|64341504 hsa-miR-4683 0 1 0
chr11:64341294|64341504 hsa-miR-4706 1 0 0
chr11:64341294|64341504 hsa-miR-4710 1 0 0
chr11:64341294|64341504 hsa-miR-4739 1 0 0
chr11:64341294|64341504 hsa-miR-4779 0 1 0
chr11:64341294|64341504 hsa-miR-5787 1 0 0
chr11:64341294|64341504 hsa-miR-6084 1 1 0
chr11:64341294|64341504 hsa-miR-6090 1 0 0
chr11:64341294|64341504 hsa-miR-6133 1 0 0
chr11:64341294|64341504 hsa-miR-7704 1 0 0
chr11:64341294|64341504 hsa-miR-8072 1 0 0
chr11:64341294|64341504 hsa-miR-92a-1-5p 1 0 0
chr11:64341294|64341504 hsa-miR-7106-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6825-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6894-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4687-3p 1 0 0
chr11:64341294|64341504 hsa-miR-6728-5p 1 0 0
chr11:64341294|64341504 hsa-miR-3663-3p 1 0 0
chr11:64341294|64341504 hsa-miR-6807-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6880-5p 1 0 0
chr11:64341294|64341504 hsa-miR-7847-3p 1 0 0
chr11:64341294|64341504 hsa-miR-6730-5p 1 1 0
chr11:64341294|64341504 hsa-miR-4655-5p 1 0 0
chr11:64341294|64341504 hsa-miR-197-5p 1 0 0
chr11:64341294|64341504 hsa-miR-7845-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6845-3p 0 1 0
chr11:64341294|64341504 hsa-miR-503-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6748-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6786-5p 1 1 0
chr11:64341294|64341504 hsa-miR-3944-3p 1 0 0
chr11:64341294|64341504 hsa-miR-204-3p 1 0 0
chr11:64341294|64341504 hsa-miR-1229-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6784-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6753-5p 1 0 0
chr11:64341294|64341504 hsa-miR-5001-3p 1 0 0
chr11:64341294|64341504 hsa-miR-296-3p 1 0 0
chr11:64341294|64341504 hsa-miR-3667-3p 0 1 0
chr11:64341294|64341504 hsa-miR-425-3p 1 0 0
chr11:64341294|64341504 hsa-miR-149-3p 1 0 0
chr11:64341294|64341504 hsa-miR-6736-3p 0 1 0
chr11:64341294|64341504 hsa-miR-6789-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6781-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4800-5p 1 0 0
chr11:64341294|64341504 hsa-miR-887-5p 0 1 0
chr11:64341294|64341504 hsa-miR-6818-5p 0 1 0
chr11:64341294|64341504 hsa-miR-2277-5p 1 0 0
chr11:64341294|64341504 hsa-miR-7152-5p 0 1 0
chr11:64341294|64341504 hsa-miR-6515-3p 0 1 0
chr11:64341294|64341504 hsa-miR-10400-5p 1 0 0
chr11:64341294|64341504 hsa-miR-1207-5p 1 0 0
chr11:64341294|64341504 hsa-miR-1233-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6769b-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6778-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6787-5p 1 0 0
chr11:64341294|64341504 hsa-miR-1343-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6726-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6756-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6769a-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6803-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6819-5p 1 0 0
chr11:64341294|64341504 hsa-miR-1249-5p 0 1 0
chr11:64341294|64341504 hsa-miR-6763-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6779-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6780a-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6797-5p 1 1 0
chr11:64341294|64341504 hsa-miR-7111-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4728-5p 1 0 0
chr11:64341294|64341504 hsa-miR-5196-5p 1 1 0
chr11:64341294|64341504 hsa-miR-6780b-5p 1 0 0
chr11:64341294|64341504 hsa-miR-1237-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4685-5p 1 1 0
chr11:64341294|64341504 hsa-miR-4725-3p 1 0 0
chr11:64341294|64341504 hsa-miR-4749-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6883-5p 1 0 0
chr11:64341294|64341504 hsa-miR-6889-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4758-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4769-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4646-5p 1 0 0
chr11:64341294|64341504 hsa-miR-4747-5p 1 1 0
chr11:64341294|64341504 hsa-miR-6724-5p 1 0 0
chr11:64341294|64341504 hsa-miR-769-3p 1 0 0
chr11:64341294|64341504 hsa-miR-6756-3p 0 1 0
chr11:64341294|64341504 hsa-miR-6837-5p 0 1 0
chr11:64341294|64341504 hsa-miR-6500-5p 1 0 0
chr11:64341294|64341504 hsa-miR-5699-3p 0 1 0
chr11:64341294|64341504 hsa-miR-10393-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:64341294|64341504
ORF Type ORF1
Protein Length 69
Nucleotide Length 207
Protein Sequence MDGSGQLALDLETEALDVADEEFPVLTLRGDRKGSWCRISLLYRQSSTLTFPSHRRLTCTDAPNSSRRT
Nucleotide Sequence CTGGATGGCAGCGGCCAGCTCGCTCTGGACCTCGAGACTGAGGCCCTGGATGTGGCGGATGAAGAGTTCCCGGTGCTCACACTGAGGGGAGACAGGAAGGGGAGCTGGTGCAGGATCTCCCTCCTCTACCGCCAAAGCTCGACCCTAACCTTTCCTTCCCACCGCCGGCTCACCTGTACTGACGCTCCCAACAGTAGCCGAAGAACG
CircID chr11:64341294|64341504
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MAAASSLWTSRLRPWMWRMKSSRCSH
Nucleotide Sequence ATGGCAGCGGCCAGCTCGCTCTGGACCTCGAGACTGAGGCCCTGGATGTGGCGGATGAAGAGTTCCCGGTGCTCACACTGA
CircID chr11:64341294|64341504
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MVQDLPPLPPKLDPNLSFPPPAHLY
Nucleotide Sequence CTGGTGCAGGATCTCCCTCCTCTACCGCCAAAGCTCGACCCTAACCTTTCCTTCCCACCGCCGGCTCACCTGTACTGA
CircID chr11:64341294|64341504
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MAVEEGDPAPAPLPVSPQCEHRELFIRHIQGLSLEVQSELAAAIQE
Nucleotide Sequence TTGGCGGTAGAGGAGGGAGATCCTGCACCAGCTCCCCTTCCTGTCTCCCCTCAGTGTGAGCACCGGGAACTCTTCATCCGCCACATCCAGGGCCTCAGTCTCGAGGTCCAGAGCGAGCTGGCCGCTGCCATCCAGGAG
CircID chr11:64341294|64341504
ORF Type ORF5
Protein Length 38
Nucleotide Length 114
Protein Sequence MHQLPFLSPLSVSTGNSSSATSRASVSRSRASWPLPSR
Nucleotide Sequence CTGCACCAGCTCCCCTTCCTGTCTCCCCTCAGTGTGAGCACCGGGAACTCTTCATCCGCCACATCCAGGGCCTCAGTCTCGAGGTCCAGAGCGAGCTGGCCGCTGCCATCCAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab