CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64354029|64354170
Strand +
CircType exon
Host Gene ENSG00000168071.20;
Algorism CIRI2;
Sequence CTGTCCCATCTGCCTCCCTGCCCTCAGGAAGCTCCGTCTCCGGGGGGCCCCCCAGGCTCTCGGTGCTGCCAGCCCCATCGGCCCCCAGGCGCAGCCCCCCAGGGGGGCCCCCCTCCCGCCGGGGCCGCATCAGCCTCTTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64354029|64354170 hsa-miR-604 0 0 1
chr11:64354029|64354170 hsa-miR-637 1 1 1
chr11:64354029|64354170 hsa-miR-650 0 0 1
chr11:64354029|64354170 hsa-miR-661 1 1 1
chr11:64354029|64354170 hsa-miR-1200 0 0 1
chr11:64354029|64354170 hsa-miR-1321 0 1 1
chr11:64354029|64354170 hsa-miR-1827 0 0 1
chr11:64354029|64354170 hsa-miR-296-5p 0 1 1
chr11:64354029|64354170 hsa-miR-885-3p 0 0 1
chr11:64354029|64354170 hsa-miR-485-5p 0 0 1
chr11:64354029|64354170 hsa-miR-331-3p 0 0 1
chr11:64354029|64354170 hsa-miR-1207-5p 1 1 1
chr11:64354029|64354170 hsa-miR-1302 0 0 1
chr11:64354029|64354170 hsa-miR-516a-3p 0 0 1
chr11:64354029|64354170 hsa-miR-663a 1 0 0
chr11:64354029|64354170 hsa-miR-762 1 1 0
chr11:64354029|64354170 hsa-miR-1268a 1 0 0
chr11:64354029|64354170 hsa-miR-3141 1 0 0
chr11:64354029|64354170 hsa-miR-3188 1 0 0
chr11:64354029|64354170 hsa-miR-4270 0 1 0
chr11:64354029|64354170 hsa-miR-4281 0 1 0
chr11:64354029|64354170 hsa-miR-3929 1 1 0
chr11:64354029|64354170 hsa-miR-1268b 1 0 0
chr11:64354029|64354170 hsa-miR-4441 0 1 0
chr11:64354029|64354170 hsa-miR-4492 0 1 0
chr11:64354029|64354170 hsa-miR-4498 1 1 0
chr11:64354029|64354170 hsa-miR-4523 0 1 0
chr11:64354029|64354170 hsa-miR-4656 1 0 0
chr11:64354029|64354170 hsa-miR-4688 1 0 0
chr11:64354029|64354170 hsa-miR-4706 0 1 0
chr11:64354029|64354170 hsa-miR-4721 1 0 0
chr11:64354029|64354170 hsa-miR-4734 1 0 0
chr11:64354029|64354170 hsa-miR-4739 0 1 0
chr11:64354029|64354170 hsa-miR-4741 1 1 0
chr11:64354029|64354170 hsa-miR-5090 1 0 0
chr11:64354029|64354170 hsa-miR-5787 1 0 0
chr11:64354029|64354170 hsa-miR-6085 1 0 0
chr11:64354029|64354170 hsa-miR-6088 1 0 0
chr11:64354029|64354170 hsa-miR-7150 1 0 0
chr11:64354029|64354170 hsa-miR-8073 0 1 0
chr11:64354029|64354170 hsa-miR-8089 1 0 0
chr11:64354029|64354170 hsa-miR-12119 1 0 0
chr11:64354029|64354170 hsa-miR-12127 1 0 0
chr11:64354029|64354170 hsa-miR-128-1-5p 1 1 0
chr11:64354029|64354170 hsa-miR-6734-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6765-5p 1 0 0
chr11:64354029|64354170 hsa-miR-139-3p 1 1 0
chr11:64354029|64354170 hsa-miR-6089 1 0 0
chr11:64354029|64354170 hsa-miR-4709-3p 0 1 0
chr11:64354029|64354170 hsa-miR-6840-5p 0 1 0
chr11:64354029|64354170 hsa-miR-6727-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6721-5p 0 1 0
chr11:64354029|64354170 hsa-miR-197-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6776-5p 1 0 0
chr11:64354029|64354170 hsa-miR-1292-5p 1 0 0
chr11:64354029|64354170 hsa-miR-3180-3p 1 1 0
chr11:64354029|64354170 hsa-miR-185-3p 1 1 0
chr11:64354029|64354170 hsa-miR-2467-5p 1 0 0
chr11:64354029|64354170 hsa-miR-23a-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6810-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6786-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6852-5p 0 1 0
chr11:64354029|64354170 hsa-miR-7109-5p 0 1 0
chr11:64354029|64354170 hsa-miR-1226-5p 1 1 0
chr11:64354029|64354170 hsa-miR-3944-3p 1 0 0
chr11:64354029|64354170 hsa-miR-1229-5p 1 0 0
chr11:64354029|64354170 hsa-miR-4640-5p 1 0 0
chr11:64354029|64354170 hsa-miR-1908-5p 1 0 0
chr11:64354029|64354170 hsa-miR-1228-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6834-5p 1 0 0
chr11:64354029|64354170 hsa-miR-4446-3p 1 0 0
chr11:64354029|64354170 hsa-miR-149-3p 1 0 0
chr11:64354029|64354170 hsa-miR-3616-3p 1 0 0
chr11:64354029|64354170 hsa-miR-6877-5p 0 1 0
chr11:64354029|64354170 hsa-miR-3065-3p 0 1 0
chr11:64354029|64354170 hsa-miR-7112-5p 1 0 0
chr11:64354029|64354170 hsa-miR-3191-3p 1 0 0
chr11:64354029|64354170 hsa-miR-4707-5p 0 1 0
chr11:64354029|64354170 hsa-miR-873-3p 1 0 0
chr11:64354029|64354170 hsa-miR-6868-5p 0 1 0
chr11:64354029|64354170 hsa-miR-3675-5p 0 1 0
chr11:64354029|64354170 hsa-miR-10400-5p 1 0 0
chr11:64354029|64354170 hsa-miR-4763-3p 1 1 0
chr11:64354029|64354170 hsa-miR-6787-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6775-5p 1 0 0
chr11:64354029|64354170 hsa-miR-5001-5p 1 1 0
chr11:64354029|64354170 hsa-miR-6743-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6754-5p 0 1 0
chr11:64354029|64354170 hsa-miR-6756-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6803-5p 1 1 0
chr11:64354029|64354170 hsa-miR-6813-5p 1 0 0
chr11:64354029|64354170 hsa-miR-1249-5p 0 1 0
chr11:64354029|64354170 hsa-miR-6722-3p 0 1 0
chr11:64354029|64354170 hsa-miR-6751-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6808-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6879-5p 1 1 0
chr11:64354029|64354170 hsa-miR-3620-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6780b-5p 1 0 0
chr11:64354029|64354170 hsa-miR-10396b-5p 1 0 0
chr11:64354029|64354170 hsa-miR-1237-5p 1 0 0
chr11:64354029|64354170 hsa-miR-328-5p 1 1 0
chr11:64354029|64354170 hsa-miR-4632-5p 1 1 0
chr11:64354029|64354170 hsa-miR-4745-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6735-5p 1 1 0
chr11:64354029|64354170 hsa-miR-6795-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6846-5p 1 1 0
chr11:64354029|64354170 hsa-miR-6848-5p 1 1 0
chr11:64354029|64354170 hsa-miR-4436b-3p 1 1 0
chr11:64354029|64354170 hsa-miR-6885-5p 1 1 0
chr11:64354029|64354170 hsa-miR-939-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6511a-5p 0 1 0
chr11:64354029|64354170 hsa-miR-7843-5p 0 1 0
chr11:64354029|64354170 hsa-miR-10398-3p 0 1 0
chr11:64354029|64354170 hsa-miR-6791-5p 1 1 0
chr11:64354029|64354170 hsa-miR-550a-5p 1 0 0
chr11:64354029|64354170 hsa-miR-6762-5p 1 0 0
chr11:64354029|64354170 hsa-miR-9851-5p 0 1 0
chr11:64354029|64354170 hsa-miR-128-2-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:64354029|64354170
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence LSHLPPCPQEAPSPGGPPGSRCCQPHRPPGAAPQGGPPPAGAASASS
Nucleotide Sequence CTGTCCCATCTGCCTCCCTGCCCTCAGGAAGCTCCGTCTCCGGGGGGCCCCCCAGGCTCTCGGTGCTGCCAGCCCCATCGGCCCCCAGGCGCAGCCCCCCAGGGGGGCCCCCCTCCCGCCGGGGCCGCATCAGCCTCTTCA
CircID chr11:64354029|64354170
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MPSGSSVSGGPPRLSVLPAPSAPRRSPPGGPPSRRGRISLF
Nucleotide Sequence CTGCCCTCAGGAAGCTCCGTCTCCGGGGGGCCCCCCAGGCTCTCGGTGCTGCCAGCCCCATCGGCCCCCAGGCGCAGCCCCCCAGGGGGGCCCCCCTCCCGCCGGGGCCGCATCAGCCTCTTC
CircID chr11:64354029|64354170
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MMRPRREGGPPGGLRLGADGAGSTESLGGPPETELPEGREADGT
Nucleotide Sequence CTGATGCGGCCCCGGCGGGAGGGGGGCCCCCCTGGGGGGCTGCGCCTGGGGGCCGATGGGGCTGGCAGCACCGAGAGCCTGGGGGGCCCCCCGGAGACGGAGCTTCCTGAGGGCAGGGAGGCAGATGGGACA
CircID chr11:64354029|64354170
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MGGCAWGPMGLAAPRAWGAPRRRSFLRAGRQMGQ
Nucleotide Sequence CTGGGGGGCTGCGCCTGGGGGCCGATGGGGCTGGCAGCACCGAGAGCCTGGGGGGCCCCCCGGAGACGGAGCTTCCTGAGGGCAGGGAGGCAGATGGGACAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab