CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64564526|64564741
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCCACCAGCACCACCACCAGCATCTCCACAGACACCACCAACACCTCCATCACCACCTCCACACAGACACCACCACCACCACCACCAATCCCGATACCATCACCAACAGCACCACCACTGTCCACACCCACCATCACCTTCACTGCCATCACTCCATCACCACCAGCACCACCAATACCATCACTAACCCCACAGCCACCATCTCTGCAAAACAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64564526|64564741 hsa-miR-34a-5p 0 0 1
chr11:64564526|64564741 hsa-miR-34a-3p 0 0 1
chr11:64564526|64564741 hsa-miR-122-5p 0 0 1
chr11:64564526|64564741 hsa-miR-122-3p 0 0 1
chr11:64564526|64564741 hsa-miR-449a 0 0 1
chr11:64564526|64564741 hsa-miR-493-5p 0 0 1
chr11:64564526|64564741 hsa-miR-493-3p 0 0 1
chr11:64564526|64564741 hsa-miR-507 0 0 1
chr11:64564526|64564741 hsa-miR-557 1 0 1
chr11:64564526|64564741 hsa-miR-609 0 0 1
chr11:64564526|64564741 hsa-miR-620 0 0 1
chr11:64564526|64564741 hsa-miR-449b-5p 0 0 1
chr11:64564526|64564741 hsa-miR-449b-3p 0 0 1
chr11:64564526|64564741 hsa-miR-541-5p 0 0 1
chr11:64564526|64564741 hsa-miR-541-3p 0 0 1
chr11:64564526|64564741 hsa-miR-921 0 0 1
chr11:64564526|64564741 hsa-miR-1270 1 0 1
chr11:64564526|64564741 hsa-miR-491-5p 0 0 1
chr11:64564526|64564741 hsa-miR-654-5p 1 0 1
chr11:64564526|64564741 hsa-miR-509-3p 1 0 1
chr11:64564526|64564741 hsa-miR-876-3p 0 0 1
chr11:64564526|64564741 hsa-miR-34c-5p 1 0 1
chr11:64564526|64564741 hsa-miR-450b-5p 0 0 1
chr11:64564526|64564741 hsa-miR-323-5p 0 0 1
chr11:64564526|64564741 hsa-miR-644 0 0 1
chr11:64564526|64564741 hsa-miR-138 0 0 1
chr11:64564526|64564741 hsa-miR-147 0 0 1
chr11:64564526|64564741 hsa-miR-1245 0 0 1
chr11:64564526|64564741 hsa-miR-608 1 0 0
chr11:64564526|64564741 hsa-miR-765 1 0 0
chr11:64564526|64564741 hsa-miR-760 1 0 0
chr11:64564526|64564741 hsa-miR-1293 1 0 0
chr11:64564526|64564741 hsa-miR-1268a 1 0 0
chr11:64564526|64564741 hsa-miR-1321 1 0 0
chr11:64564526|64564741 hsa-miR-548q 1 0 0
chr11:64564526|64564741 hsa-miR-3138 1 1 0
chr11:64564526|64564741 hsa-miR-1193 1 0 0
chr11:64564526|64564741 hsa-miR-4322 1 0 0
chr11:64564526|64564741 hsa-miR-4257 1 0 0
chr11:64564526|64564741 hsa-miR-3665 1 0 0
chr11:64564526|64564741 hsa-miR-3911 1 1 0
chr11:64564526|64564741 hsa-miR-3936 1 0 0
chr11:64564526|64564741 hsa-miR-1268b 1 0 0
chr11:64564526|64564741 hsa-miR-4440 1 0 0
chr11:64564526|64564741 hsa-miR-4443 1 0 0
chr11:64564526|64564741 hsa-miR-4447 1 0 0
chr11:64564526|64564741 hsa-miR-4460 1 0 0
chr11:64564526|64564741 hsa-miR-4466 1 0 0
chr11:64564526|64564741 hsa-miR-4481 1 0 0
chr11:64564526|64564741 hsa-miR-4489 1 0 0
chr11:64564526|64564741 hsa-miR-4491 1 0 0
chr11:64564526|64564741 hsa-miR-4507 1 0 0
chr11:64564526|64564741 hsa-miR-4525 1 0 0
chr11:64564526|64564741 hsa-miR-4534 1 1 0
chr11:64564526|64564741 hsa-miR-4642 1 0 0
chr11:64564526|64564741 hsa-miR-4647 1 0 0
chr11:64564526|64564741 hsa-miR-4651 1 0 0
chr11:64564526|64564741 hsa-miR-4657 0 1 0
chr11:64564526|64564741 hsa-miR-4658 1 0 0
chr11:64564526|64564741 hsa-miR-4669 1 0 0
chr11:64564526|64564741 hsa-miR-4689 1 0 0
chr11:64564526|64564741 hsa-miR-4710 1 0 0
chr11:64564526|64564741 hsa-miR-4752 1 0 0
chr11:64564526|64564741 hsa-miR-4784 1 0 0
chr11:64564526|64564741 hsa-miR-5192 1 0 0
chr11:64564526|64564741 hsa-miR-5194 1 0 0
chr11:64564526|64564741 hsa-miR-5572 1 0 0
chr11:64564526|64564741 hsa-miR-5698 1 0 0
chr11:64564526|64564741 hsa-miR-5787 1 0 0
chr11:64564526|64564741 hsa-miR-6085 1 0 0
chr11:64564526|64564741 hsa-miR-6088 1 0 0
chr11:64564526|64564741 hsa-miR-6127 1 0 0
chr11:64564526|64564741 hsa-miR-6129 1 0 0
chr11:64564526|64564741 hsa-miR-6131 1 0 0
chr11:64564526|64564741 hsa-miR-6132 1 0 0
chr11:64564526|64564741 hsa-miR-6133 1 0 0
chr11:64564526|64564741 hsa-miR-6134 1 1 0
chr11:64564526|64564741 hsa-miR-6860 1 0 0
chr11:64564526|64564741 hsa-miR-7150 1 0 0
chr11:64564526|64564741 hsa-miR-8057 1 0 0
chr11:64564526|64564741 hsa-miR-8075 1 0 0
chr11:64564526|64564741 hsa-miR-8082 1 0 0
chr11:64564526|64564741 hsa-miR-1843 1 0 0
chr11:64564526|64564741 hsa-miR-11400 1 0 0
chr11:64564526|64564741 hsa-miR-12114 1 0 0
chr11:64564526|64564741 hsa-miR-12128 1 0 0
chr11:64564526|64564741 hsa-miR-138-5p 1 0 0
chr11:64564526|64564741 hsa-miR-135a-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6734-5p 1 0 0
chr11:64564526|64564741 hsa-miR-4731-5p 1 0 0
chr11:64564526|64564741 hsa-miR-504-3p 1 0 0
chr11:64564526|64564741 hsa-miR-323a-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6747-5p 1 0 0
chr11:64564526|64564741 hsa-miR-125b-1-3p 1 0 0
chr11:64564526|64564741 hsa-miR-3150a-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6825-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6857-5p 1 0 0
chr11:64564526|64564741 hsa-miR-4687-3p 1 0 0
chr11:64564526|64564741 hsa-miR-25-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6799-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6728-5p 1 0 0
chr11:64564526|64564741 hsa-miR-3692-5p 1 0 0
chr11:64564526|64564741 hsa-miR-8071 1 0 0
chr11:64564526|64564741 hsa-miR-6804-5p 1 0 0
chr11:64564526|64564741 hsa-miR-139-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6833-5p 1 0 0
chr11:64564526|64564741 hsa-miR-1236-5p 1 0 0
chr11:64564526|64564741 hsa-miR-7114-5p 1 1 0
chr11:64564526|64564741 hsa-miR-6515-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6757-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6880-5p 1 0 0
chr11:64564526|64564741 hsa-miR-7847-3p 1 1 0
chr11:64564526|64564741 hsa-miR-6867-5p 1 0 0
chr11:64564526|64564741 hsa-miR-3064-5p 1 0 0
chr11:64564526|64564741 hsa-miR-7160-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6890-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6741-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6759-5p 1 0 0
chr11:64564526|64564741 hsa-miR-8069 1 0 0
chr11:64564526|64564741 hsa-miR-6742-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6716-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6871-5p 1 0 0
chr11:64564526|64564741 hsa-miR-3151-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6748-5p 1 1 0
chr11:64564526|64564741 hsa-miR-6772-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6793-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6796-5p 1 1 0
chr11:64564526|64564741 hsa-miR-6732-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6881-5p 1 0 0
chr11:64564526|64564741 hsa-miR-2467-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6782-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6514-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6888-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6786-5p 1 0 0
chr11:64564526|64564741 hsa-miR-1226-5p 1 0 0
chr11:64564526|64564741 hsa-miR-193b-5p 1 0 0
chr11:64564526|64564741 hsa-miR-885-3p 1 0 0
chr11:64564526|64564741 hsa-miR-4764-5p 1 0 0
chr11:64564526|64564741 hsa-miR-1908-5p 1 0 0
chr11:64564526|64564741 hsa-miR-296-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6771-5p 1 0 0
chr11:64564526|64564741 hsa-let-7b-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6823-5p 1 0 0
chr11:64564526|64564741 hsa-miR-4756-3p 1 1 0
chr11:64564526|64564741 hsa-miR-889-5p 1 0 0
chr11:64564526|64564741 hsa-miR-7854-3p 1 0 0
chr11:64564526|64564741 hsa-miR-4787-5p 1 0 0
chr11:64564526|64564741 hsa-miR-3158-5p 1 0 0
chr11:64564526|64564741 hsa-miR-194-3p 1 0 0
chr11:64564526|64564741 hsa-miR-7850-5p 1 0 0
chr11:64564526|64564741 hsa-miR-5010-5p 1 0 0
chr11:64564526|64564741 hsa-let-7c-5p 1 0 0
chr11:64564526|64564741 hsa-miR-1250-5p 1 0 0
chr11:64564526|64564741 hsa-miR-3120-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6832-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6770-3p 1 0 0
chr11:64564526|64564741 hsa-miR-1207-5p 1 0 0
chr11:64564526|64564741 hsa-miR-4763-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6769b-5p 1 1 0
chr11:64564526|64564741 hsa-miR-6812-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6865-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6737-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6752-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6754-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6756-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6769a-5p 1 1 0
chr11:64564526|64564741 hsa-miR-6803-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6813-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6815-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6819-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6842-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6851-5p 1 1 0
chr11:64564526|64564741 hsa-miR-7110-5p 1 0 0
chr11:64564526|64564741 hsa-miR-10401-5p 1 0 0
chr11:64564526|64564741 hsa-miR-11181-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6751-5p 1 1 0
chr11:64564526|64564741 hsa-miR-6862-5p 1 0 0
chr11:64564526|64564741 hsa-miR-449c-5p 1 0 0
chr11:64564526|64564741 hsa-miR-4701-3p 1 0 0
chr11:64564526|64564741 hsa-miR-6846-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6848-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6858-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6883-5p 1 0 0
chr11:64564526|64564741 hsa-miR-3187-5p 1 0 0
chr11:64564526|64564741 hsa-miR-34b-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6511b-5p 1 0 0
chr11:64564526|64564741 hsa-miR-3198 1 0 0
chr11:64564526|64564741 hsa-miR-3940-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6758-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6736-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6855-5p 1 1 0
chr11:64564526|64564741 hsa-miR-4700-5p 1 0 0
chr11:64564526|64564741 hsa-miR-4472 1 0 0
chr11:64564526|64564741 hsa-miR-3689d 1 1 0
chr11:64564526|64564741 hsa-miR-6790-5p 1 0 0
chr11:64564526|64564741 hsa-miR-6849-5p 1 0 0
chr11:64564526|64564741 hsa-miR-342-5p 1 0 0
chr11:64564526|64564741 hsa-miR-9851-5p 1 0 0
chr11:64564526|64564741 hsa-miR-2682-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:64564526|64564741
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MSTPTITFTAITPSPPAPPIPSLTPQPPSLQN
Nucleotide Sequence CTGTCCACACCCACCATCACCTTCACTGCCATCACTCCATCACCACCAGCACCACCAATACCATCACTAACCCCACAGCCACCATCTCTGCAAAAC
CircID chr11:64564526|64564741
ORF Type ORF2
Protein Length 72
Nucleotide Length 216
Protein Sequence MFCRDGGCGVSDGIGGAGGDGVMAVKVMVGVDSGGAVGDGIGIGGGGGGVCVEVVMEVLVVSVEMLVVVLVE
Nucleotide Sequence ATGTTTTGCAGAGATGGTGGCTGTGGGGTTAGTGATGGTATTGGTGGTGCTGGTGGTGATGGAGTGATGGCAGTGAAGGTGATGGTGGGTGTGGACAGTGGTGGTGCTGTTGGTGATGGTATCGGGATTGGTGGTGGTGGTGGTGGTGTCTGTGTGGAGGTGGTGATGGAGGTGTTGGTGGTGTCTGTGGAGATGCTGGTGGTGGTGCTGGTGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab