CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64765128|64765268
Strand -
CircType exon
Host Gene ENSG00000168066.19;
Algorism CIRI2;
Sequence CTTGAAAAACCCACAACCAGCTTGACATGAATGGCCAAAGCCCTTGCCCAAAACCATTTGCTCCCCTCTCCTTGGTAAGGGAAGGAGAACTGGAGAGAAGGGAAAGGAATCTAAATTGCAGCAGAAGACCGGGGAGAGCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64765128|64765268 hsa-miR-204-5p 0 0 1
chr11:64765128|64765268 hsa-miR-204-3p 0 0 1
chr11:64765128|64765268 hsa-miR-211-5p 0 0 1
chr11:64765128|64765268 hsa-miR-211-3p 0 0 1
chr11:64765128|64765268 hsa-miR-498-5p 0 0 1
chr11:64765128|64765268 hsa-miR-498-3p 0 0 1
chr11:64765128|64765268 hsa-miR-522-5p 0 0 1
chr11:64765128|64765268 hsa-miR-522-3p 0 0 1
chr11:64765128|64765268 hsa-miR-588 0 0 1
chr11:64765128|64765268 hsa-miR-623 0 0 1
chr11:64765128|64765268 hsa-miR-629-5p 0 0 1
chr11:64765128|64765268 hsa-miR-629-3p 0 0 1
chr11:64765128|64765268 hsa-miR-766-5p 0 0 1
chr11:64765128|64765268 hsa-miR-766-3p 0 0 1
chr11:64765128|64765268 hsa-miR-939-5p 0 0 1
chr11:64765128|64765268 hsa-miR-939-3p 0 0 1
chr11:64765128|64765268 hsa-miR-942-5p 0 0 1
chr11:64765128|64765268 hsa-miR-942-3p 0 0 1
chr11:64765128|64765268 hsa-miR-1305 0 0 1
chr11:64765128|64765268 hsa-miR-145-5p 0 1 1
chr11:64765128|64765268 hsa-miR-453 0 0 1
chr11:64765128|64765268 hsa-miR-762 1 0 0
chr11:64765128|64765268 hsa-miR-1261 1 0 0
chr11:64765128|64765268 hsa-miR-4428 0 1 0
chr11:64765128|64765268 hsa-miR-4486 1 0 0
chr11:64765128|64765268 hsa-miR-1587 1 0 0
chr11:64765128|64765268 hsa-miR-5192 1 0 0
chr11:64765128|64765268 hsa-miR-6090 1 0 0
chr11:64765128|64765268 hsa-miR-6860 0 1 0
chr11:64765128|64765268 hsa-miR-4433b-3p 1 0 0
chr11:64765128|64765268 hsa-miR-93-3p 1 0 0
chr11:64765128|64765268 hsa-miR-6721-5p 1 0 0
chr11:64765128|64765268 hsa-miR-8069 1 0 0
chr11:64765128|64765268 hsa-miR-7110-3p 1 1 0
chr11:64765128|64765268 hsa-miR-6716-5p 1 0 0
chr11:64765128|64765268 hsa-miR-423-3p 1 0 0
chr11:64765128|64765268 hsa-miR-6782-5p 1 0 0
chr11:64765128|64765268 hsa-miR-6763-3p 1 1 0
chr11:64765128|64765268 hsa-miR-4640-5p 1 0 0
chr11:64765128|64765268 hsa-miR-7113-3p 1 0 0
chr11:64765128|64765268 hsa-miR-6809-3p 1 1 0
chr11:64765128|64765268 hsa-miR-6824-5p 1 0 0
chr11:64765128|64765268 hsa-miR-3925-3p 0 1 0
chr11:64765128|64765268 hsa-miR-7850-5p 1 0 0
chr11:64765128|64765268 hsa-miR-181b-5p 1 0 0
chr11:64765128|64765268 hsa-miR-4707-5p 1 0 0
chr11:64765128|64765268 hsa-miR-1236-3p 1 0 0
chr11:64765128|64765268 hsa-miR-7106-3p 1 0 0
chr11:64765128|64765268 hsa-miR-4778-3p 0 1 0
chr11:64765128|64765268 hsa-miR-6886-3p 1 0 0
chr11:64765128|64765268 hsa-miR-5088-3p 0 1 0
chr11:64765128|64765268 hsa-miR-6738-3p 1 0 0
chr11:64765128|64765268 hsa-miR-5584-3p 0 1 0
chr11:64765128|64765268 hsa-miR-6780b-3p 1 0 0
chr11:64765128|64765268 hsa-miR-1537-5p 1 0 0
chr11:64765128|64765268 hsa-miR-1207-5p 1 0 0
chr11:64765128|64765268 hsa-miR-4763-3p 1 0 0
chr11:64765128|64765268 hsa-miR-1343-5p 1 0 0
chr11:64765128|64765268 hsa-miR-6813-5p 1 0 0
chr11:64765128|64765268 hsa-miR-1249-5p 1 0 0
chr11:64765128|64765268 hsa-miR-6722-3p 1 0 0
chr11:64765128|64765268 hsa-miR-6779-5p 1 0 0
chr11:64765128|64765268 hsa-miR-6879-5p 1 0 0
chr11:64765128|64765268 hsa-miR-320a-5p 1 1 0
chr11:64765128|64765268 hsa-miR-3620-5p 1 0 0
chr11:64765128|64765268 hsa-miR-4728-5p 1 0 0
chr11:64765128|64765268 hsa-miR-5196-5p 1 0 0
chr11:64765128|64765268 hsa-miR-6780b-5p 1 0 0
chr11:64765128|64765268 hsa-miR-328-5p 1 0 0
chr11:64765128|64765268 hsa-miR-4649-5p 1 0 0
chr11:64765128|64765268 hsa-miR-4685-5p 1 0 0
chr11:64765128|64765268 hsa-miR-6729-5p 1 0 0
chr11:64765128|64765268 hsa-miR-6893-3p 1 0 0
chr11:64765128|64765268 hsa-miR-4768-5p 0 1 0
chr11:64765128|64765268 hsa-miR-5006-3p 0 1 0
chr11:64765128|64765268 hsa-miR-6833-3p 0 1 0
chr11:64765128|64765268 hsa-miR-5195-3p 1 1 0
chr11:64765128|64765268 hsa-miR-6843-3p 1 0 0
chr11:64765128|64765268 hsa-miR-376a-5p 0 1 0
chr11:64765128|64765268 hsa-miR-181d-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:64765128|64765268
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MPKTICSPLLGKGRRTGEKGKESKLQQKTGES
Nucleotide Sequence TTGCCCAAAACCATTTGCTCCCCTCTCCTTGGTAAGGGAAGGAGAACTGGAGAGAAGGGAAAGGAATCTAAATTGCAGCAGAAGACCGGGGAGAGC
CircID chr11:64765128|64765268
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MNGQSPCPKPFAPLSLVREGELERRERNLNCSRRPGRA
Nucleotide Sequence ATGAATGGCCAAAGCCCTTGCCCAAAACCATTTGCTCCCCTCTCCTTGGTAAGGGAAGGAGAACTGGAGAGAAGGGAAAGGAATCTAAATTGCAGCAGAAGACCGGGGAGAGCA
CircID chr11:64765128|64765268
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MLSPVFCCNLDSFPFSPVLLPLPRRGEQMVLGKGFGHSCQAGCGFFK
Nucleotide Sequence ATGCTCTCCCCGGTCTTCTGCTGCAATTTAGATTCCTTTCCCTTCTCTCCAGTTCTCCTTCCCTTACCAAGGAGAGGGGAGCAAATGGTTTTGGGCAAGGGCTTTGGCCATTCATGTCAAGCTGGTTGTGGGTTTTTCAAG
CircID chr11:64765128|64765268
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MLQFRFLSLLSSSPSLTKERGANGFGQGLWPFMSSWLWVFQ
Nucleotide Sequence CTGCTGCAATTTAGATTCCTTTCCCTTCTCTCCAGTTCTCCTTCCCTTACCAAGGAGAGGGGAGCAAATGGTTTTGGGCAAGGGCTTTGGCCATTCATGTCAAGCTGGTTGTGGGTTTTTCAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab