CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64895769|64895928
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CGCTCCTTGCCTGGCCCCCCAGACGCCCCTGCCAGATGGTCAGAGGCCCATCCTTCCTTCTGTCTGCCAGATCCTCTGCCCAGCATCTCACCTGGCATCACTCTTTCCCACCTGACTGAACACTCCCGGGGGCTCCCTGGTGCCCATGCATCCCTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64895769|64895928 hsa-miR-122-5p 0 0 1
chr11:64895769|64895928 hsa-miR-122-3p 0 0 1
chr11:64895769|64895928 hsa-miR-143-5p 0 0 1
chr11:64895769|64895928 hsa-miR-143-3p 0 0 1
chr11:64895769|64895928 hsa-miR-591 0 0 1
chr11:64895769|64895928 hsa-miR-612 1 1 1
chr11:64895769|64895928 hsa-miR-637 1 0 1
chr11:64895769|64895928 hsa-miR-1252-5p 0 0 1
chr11:64895769|64895928 hsa-miR-1252-3p 0 0 1
chr11:64895769|64895928 hsa-miR-1324 0 0 1
chr11:64895769|64895928 hsa-miR-125a-3p 1 1 1
chr11:64895769|64895928 hsa-miR-1225-3p 0 0 1
chr11:64895769|64895928 hsa-miR-1207-5p 1 1 1
chr11:64895769|64895928 hsa-miR-1285 0 0 1
chr11:64895769|64895928 hsa-miR-663a 1 0 0
chr11:64895769|64895928 hsa-miR-762 1 0 0
chr11:64895769|64895928 hsa-miR-298 1 1 0
chr11:64895769|64895928 hsa-miR-1182 1 0 0
chr11:64895769|64895928 hsa-miR-1268a 1 0 0
chr11:64895769|64895928 hsa-miR-2861 1 0 0
chr11:64895769|64895928 hsa-miR-3147 1 0 0
chr11:64895769|64895928 hsa-miR-3166 1 0 0
chr11:64895769|64895928 hsa-miR-3188 1 0 0
chr11:64895769|64895928 hsa-miR-3196 1 0 0
chr11:64895769|64895928 hsa-miR-4298 1 0 0
chr11:64895769|64895928 hsa-miR-4255 0 1 0
chr11:64895769|64895928 hsa-miR-4270 0 1 0
chr11:64895769|64895928 hsa-miR-3665 1 0 0
chr11:64895769|64895928 hsa-miR-3936 1 0 0
chr11:64895769|64895928 hsa-miR-3943 0 1 0
chr11:64895769|64895928 hsa-miR-3945 1 0 0
chr11:64895769|64895928 hsa-miR-1268b 1 0 0
chr11:64895769|64895928 hsa-miR-4476 0 1 0
chr11:64895769|64895928 hsa-miR-3689c 0 1 0
chr11:64895769|64895928 hsa-miR-4486 1 0 0
chr11:64895769|64895928 hsa-miR-4533 1 1 0
chr11:64895769|64895928 hsa-miR-3960 1 0 0
chr11:64895769|64895928 hsa-miR-4651 1 0 0
chr11:64895769|64895928 hsa-miR-4654 1 0 0
chr11:64895769|64895928 hsa-miR-4656 1 0 0
chr11:64895769|64895928 hsa-miR-4669 1 0 0
chr11:64895769|64895928 hsa-miR-4673 0 1 0
chr11:64895769|64895928 hsa-miR-4739 1 0 0
chr11:64895769|64895928 hsa-miR-4741 1 0 0
chr11:64895769|64895928 hsa-miR-5192 1 0 0
chr11:64895769|64895928 hsa-miR-5698 1 0 0
chr11:64895769|64895928 hsa-miR-5787 1 0 0
chr11:64895769|64895928 hsa-miR-6085 1 0 0
chr11:64895769|64895928 hsa-miR-6088 1 0 0
chr11:64895769|64895928 hsa-miR-6090 1 0 0
chr11:64895769|64895928 hsa-miR-6127 1 0 0
chr11:64895769|64895928 hsa-miR-6860 1 1 0
chr11:64895769|64895928 hsa-miR-7150 0 1 0
chr11:64895769|64895928 hsa-miR-8073 1 0 0
chr11:64895769|64895928 hsa-miR-8085 1 0 0
chr11:64895769|64895928 hsa-miR-8089 1 0 0
chr11:64895769|64895928 hsa-miR-9899 1 0 0
chr11:64895769|64895928 hsa-miR-12120 1 0 0
chr11:64895769|64895928 hsa-miR-4731-5p 1 0 0
chr11:64895769|64895928 hsa-miR-504-3p 1 0 0
chr11:64895769|64895928 hsa-miR-1247-3p 0 1 0
chr11:64895769|64895928 hsa-miR-6747-5p 1 0 0
chr11:64895769|64895928 hsa-miR-4433a-3p 1 0 0
chr11:64895769|64895928 hsa-miR-671-5p 1 0 0
chr11:64895769|64895928 hsa-miR-7106-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6894-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6799-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6728-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6804-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6089 1 0 0
chr11:64895769|64895928 hsa-miR-3192-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6757-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6746-5p 1 0 0
chr11:64895769|64895928 hsa-miR-593-5p 0 1 0
chr11:64895769|64895928 hsa-miR-3622b-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6721-5p 1 1 0
chr11:64895769|64895928 hsa-miR-197-5p 1 0 0
chr11:64895769|64895928 hsa-miR-3605-5p 1 0 0
chr11:64895769|64895928 hsa-miR-3180-3p 1 0 0
chr11:64895769|64895928 hsa-miR-185-3p 1 0 0
chr11:64895769|64895928 hsa-miR-6829-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6732-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6805-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6827-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6798-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6782-5p 1 0 0
chr11:64895769|64895928 hsa-miR-30b-3p 0 1 0
chr11:64895769|64895928 hsa-miR-5006-5p 1 1 0
chr11:64895769|64895928 hsa-miR-7109-5p 1 0 0
chr11:64895769|64895928 hsa-miR-1229-5p 1 1 0
chr11:64895769|64895928 hsa-miR-4640-5p 1 1 0
chr11:64895769|64895928 hsa-miR-1228-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6771-5p 1 0 0
chr11:64895769|64895928 hsa-miR-149-3p 1 1 0
chr11:64895769|64895928 hsa-miR-937-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6824-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6789-5p 1 1 0
chr11:64895769|64895928 hsa-miR-3162-5p 1 0 0
chr11:64895769|64895928 hsa-miR-30a-3p 1 0 0
chr11:64895769|64895928 hsa-miR-6895-5p 0 1 0
chr11:64895769|64895928 hsa-miR-1225-5p 1 0 0
chr11:64895769|64895928 hsa-miR-654-5p 0 1 0
chr11:64895769|64895928 hsa-miR-6868-5p 1 1 0
chr11:64895769|64895928 hsa-miR-7113-5p 0 1 0
chr11:64895769|64895928 hsa-miR-483-5p 0 1 0
chr11:64895769|64895928 hsa-miR-5587-3p 1 1 0
chr11:64895769|64895928 hsa-miR-30d-3p 1 0 0
chr11:64895769|64895928 hsa-miR-10400-5p 1 0 0
chr11:64895769|64895928 hsa-miR-1233-5p 1 1 0
chr11:64895769|64895928 hsa-miR-3689b-3p 0 1 0
chr11:64895769|64895928 hsa-miR-4763-3p 1 1 0
chr11:64895769|64895928 hsa-miR-6769b-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6778-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6787-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6816-5p 1 0 0
chr11:64895769|64895928 hsa-miR-1343-5p 1 0 0
chr11:64895769|64895928 hsa-miR-3180 1 0 0
chr11:64895769|64895928 hsa-miR-6726-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6743-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6752-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6756-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6769a-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6803-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6813-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6819-5p 1 0 0
chr11:64895769|64895928 hsa-miR-7110-5p 1 0 0
chr11:64895769|64895928 hsa-miR-1249-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6722-3p 1 1 0
chr11:64895769|64895928 hsa-miR-6774-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6779-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6780a-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6788-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6797-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6808-5p 1 0 0
chr11:64895769|64895928 hsa-miR-4728-5p 1 1 0
chr11:64895769|64895928 hsa-miR-5189-5p 1 1 0
chr11:64895769|64895928 hsa-miR-5196-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6780b-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6836-5p 1 0 0
chr11:64895769|64895928 hsa-miR-10396b-5p 1 0 0
chr11:64895769|64895928 hsa-miR-1237-5p 1 0 0
chr11:64895769|64895928 hsa-miR-1909-3p 1 1 0
chr11:64895769|64895928 hsa-miR-328-5p 1 1 0
chr11:64895769|64895928 hsa-miR-3689a-3p 0 1 0
chr11:64895769|64895928 hsa-miR-4725-3p 1 0 0
chr11:64895769|64895928 hsa-miR-4726-5p 0 1 0
chr11:64895769|64895928 hsa-miR-6735-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6738-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6777-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6883-5p 1 1 0
chr11:64895769|64895928 hsa-miR-3187-5p 1 1 0
chr11:64895769|64895928 hsa-miR-6845-5p 0 1 0
chr11:64895769|64895928 hsa-miR-6885-5p 0 1 0
chr11:64895769|64895928 hsa-miR-939-5p 1 0 0
chr11:64895769|64895928 hsa-miR-4758-5p 1 0 0
chr11:64895769|64895928 hsa-miR-1910-3p 0 1 0
chr11:64895769|64895928 hsa-miR-6511a-5p 0 1 0
chr11:64895769|64895928 hsa-miR-6511b-5p 1 0 0
chr11:64895769|64895928 hsa-miR-3198 1 0 0
chr11:64895769|64895928 hsa-miR-6739-5p 0 1 0
chr11:64895769|64895928 hsa-miR-1914-3p 1 0 0
chr11:64895769|64895928 hsa-miR-3679-5p 1 1 0
chr11:64895769|64895928 hsa-miR-4646-5p 1 0 0
chr11:64895769|64895928 hsa-miR-541-3p 0 1 0
chr11:64895769|64895928 hsa-miR-6785-5p 1 1 0
chr11:64895769|64895928 hsa-miR-4667-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6724-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6791-5p 1 0 0
chr11:64895769|64895928 hsa-miR-6762-5p 0 1 0
chr11:64895769|64895928 hsa-miR-4757-5p 0 1 0
chr11:64895769|64895928 hsa-miR-9851-3p 0 1 0
chr11:64895769|64895928 hsa-miR-6744-3p 0 1 0
chr11:64895769|64895928 hsa-miR-4645-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:64895769|64895928
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MPGPPDAPARWSEAHPSFCLPDPLPSISPGITLSHLTEHSRGLPGAHASLP
Nucleotide Sequence TTGCCTGGCCCCCCAGACGCCCCTGCCAGATGGTCAGAGGCCCATCCTTCCTTCTGTCTGCCAGATCCTCTGCCCAGCATCTCACCTGGCATCACTCTTTCCCACCTGACTGAACACTCCCGGGGGCTCCCTGGTGCCCATGCATCCCTCCCA
CircID chr11:64895769|64895928
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MAPQTPLPDGQRPILPSVCQILCPASHLASLFPT
Nucleotide Sequence CTGGCCCCCCAGACGCCCCTGCCAGATGGTCAGAGGCCCATCCTTCCTTCTGTCTGCCAGATCCTCTGCCCAGCATCTCACCTGGCATCACTCTTTCCCACCTGA
CircID chr11:64895769|64895928
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MVRGPSFLLSARSSAQHLTWHHSFPPD
Nucleotide Sequence ATGGTCAGAGGCCCATCCTTCCTTCTGTCTGCCAGATCCTCTGCCCAGCATCTCACCTGGCATCACTCTTTCCCACCTGACTGA
CircID chr11:64895769|64895928
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MPGEMLGRGSGRQKEGWASDHLAGASGGPGKE
Nucleotide Sequence ATGCCAGGTGAGATGCTGGGCAGAGGATCTGGCAGACAGAAGGAAGGATGGGCCTCTGACCATCTGGCAGGGGCGTCTGGGGGGCCAGGCAAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab