CircRNA Information

General Information
circRNA Basic Information
CircID chr11:64928099|64928360
Strand +
CircType exon
Host Gene ENSG00000068971.12;
Algorism CIRI2;
Sequence CCGGTGCAGGATGGTCTTGAGGTACTCACGCTCCCGGGGATCCTCACTATCAAATAGCTCCAGGAGCTGTGGGAACCAGAGTCAGGGTCAGGGTCAGGGTCAGGGGAAAGGTCCACCCCAGGTTGCTTCCATCCTATCCCTGGCCCCTCAGAGAGCCTGCCCCTGCCTTGTGGTACCACCCAGCCTGGGCTCCCCACTTCACCATCAGGACAAACTTTTGATCCACATATCTCTTGGCCACGGAGGGCTGGAAGTCTGGGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:64928099|64928360 hsa-miR-345-5p 0 0 1
chr11:64928099|64928360 hsa-miR-345-3p 0 0 1
chr11:64928099|64928360 hsa-miR-484 0 0 1
chr11:64928099|64928360 hsa-miR-492 0 0 1
chr11:64928099|64928360 hsa-miR-504-5p 0 0 1
chr11:64928099|64928360 hsa-miR-504-3p 0 0 1
chr11:64928099|64928360 hsa-miR-561-5p 0 0 1
chr11:64928099|64928360 hsa-miR-561-3p 0 0 1
chr11:64928099|64928360 hsa-miR-573 0 0 1
chr11:64928099|64928360 hsa-miR-608 1 0 1
chr11:64928099|64928360 hsa-miR-617 0 0 1
chr11:64928099|64928360 hsa-miR-190b-5p 0 0 1
chr11:64928099|64928360 hsa-miR-190b-3p 0 0 1
chr11:64928099|64928360 hsa-miR-921 0 1 1
chr11:64928099|64928360 hsa-miR-939-5p 0 0 1
chr11:64928099|64928360 hsa-miR-939-3p 0 0 1
chr11:64928099|64928360 hsa-miR-940 0 1 1
chr11:64928099|64928360 hsa-miR-1204 0 0 1
chr11:64928099|64928360 hsa-miR-1293 0 0 1
chr11:64928099|64928360 hsa-miR-1263 0 0 1
chr11:64928099|64928360 hsa-miR-1265 0 0 1
chr11:64928099|64928360 hsa-miR-671-5p 1 0 1
chr11:64928099|64928360 hsa-miR-491-5p 1 1 1
chr11:64928099|64928360 hsa-miR-486-3p 0 0 1
chr11:64928099|64928360 hsa-miR-299-3p 0 0 1
chr11:64928099|64928360 hsa-miR-490-3p 0 0 1
chr11:64928099|64928360 hsa-miR-423-5p 0 0 1
chr11:64928099|64928360 hsa-miR-331-3p 0 0 1
chr11:64928099|64928360 hsa-miR-188-3p 0 0 1
chr11:64928099|64928360 hsa-miR-140-3p 0 0 1
chr11:64928099|64928360 hsa-miR-1207-5p 1 1 1
chr11:64928099|64928360 hsa-miR-342-5p 0 0 1
chr11:64928099|64928360 hsa-miR-1260 0 0 1
chr11:64928099|64928360 hsa-miR-1185 0 0 1
chr11:64928099|64928360 hsa-miR-190 0 0 1
chr11:64928099|64928360 hsa-miR-762 1 0 0
chr11:64928099|64928360 hsa-miR-1291 0 1 0
chr11:64928099|64928360 hsa-miR-3155a 0 1 0
chr11:64928099|64928360 hsa-miR-4259 1 0 0
chr11:64928099|64928360 hsa-miR-4254 0 1 0
chr11:64928099|64928360 hsa-miR-3714 0 1 0
chr11:64928099|64928360 hsa-miR-3911 1 0 0
chr11:64928099|64928360 hsa-miR-4457 0 1 0
chr11:64928099|64928360 hsa-miR-3155b 0 1 0
chr11:64928099|64928360 hsa-miR-4505 0 1 0
chr11:64928099|64928360 hsa-miR-2392 1 1 0
chr11:64928099|64928360 hsa-miR-4651 1 0 0
chr11:64928099|64928360 hsa-miR-4656 1 0 0
chr11:64928099|64928360 hsa-miR-4657 1 0 0
chr11:64928099|64928360 hsa-miR-4736 0 1 0
chr11:64928099|64928360 hsa-miR-4739 1 0 0
chr11:64928099|64928360 hsa-miR-4741 1 0 0
chr11:64928099|64928360 hsa-miR-4752 0 1 0
chr11:64928099|64928360 hsa-miR-4780 0 1 0
chr11:64928099|64928360 hsa-miR-5194 1 1 0
chr11:64928099|64928360 hsa-miR-5739 1 0 0
chr11:64928099|64928360 hsa-miR-5787 1 0 0
chr11:64928099|64928360 hsa-miR-6745 0 1 0
chr11:64928099|64928360 hsa-miR-12119 1 1 0
chr11:64928099|64928360 hsa-miR-12126 0 1 0
chr11:64928099|64928360 hsa-miR-4433b-3p 1 0 0
chr11:64928099|64928360 hsa-miR-6734-5p 0 1 0
chr11:64928099|64928360 hsa-miR-1247-3p 0 1 0
chr11:64928099|64928360 hsa-miR-6765-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6861-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6825-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6894-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6720-5p 0 1 0
chr11:64928099|64928360 hsa-miR-218-1-3p 0 1 0
chr11:64928099|64928360 hsa-miR-6854-5p 0 1 0
chr11:64928099|64928360 hsa-miR-6728-5p 1 1 0
chr11:64928099|64928360 hsa-miR-8071 1 0 0
chr11:64928099|64928360 hsa-miR-6089 1 0 0
chr11:64928099|64928360 hsa-miR-4653-3p 1 0 0
chr11:64928099|64928360 hsa-miR-6721-5p 0 1 0
chr11:64928099|64928360 hsa-miR-8069 1 0 0
chr11:64928099|64928360 hsa-miR-7108-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6871-5p 1 0 0
chr11:64928099|64928360 hsa-miR-3180-3p 0 1 0
chr11:64928099|64928360 hsa-miR-4725-5p 0 1 0
chr11:64928099|64928360 hsa-miR-3130-3p 0 1 0
chr11:64928099|64928360 hsa-miR-6821-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6786-5p 1 0 0
chr11:64928099|64928360 hsa-miR-5088-5p 1 1 0
chr11:64928099|64928360 hsa-miR-4793-5p 0 1 0
chr11:64928099|64928360 hsa-miR-4640-5p 1 1 0
chr11:64928099|64928360 hsa-miR-659-5p 0 1 0
chr11:64928099|64928360 hsa-miR-378a-5p 0 1 0
chr11:64928099|64928360 hsa-miR-664b-5p 1 0 0
chr11:64928099|64928360 hsa-miR-4708-3p 1 1 0
chr11:64928099|64928360 hsa-miR-4732-3p 0 1 0
chr11:64928099|64928360 hsa-miR-3619-3p 0 1 0
chr11:64928099|64928360 hsa-miR-4661-3p 0 1 0
chr11:64928099|64928360 hsa-miR-6818-5p 1 0 0
chr11:64928099|64928360 hsa-miR-3940-3p 0 1 0
chr11:64928099|64928360 hsa-miR-4750-3p 0 1 0
chr11:64928099|64928360 hsa-miR-1911-5p 0 1 0
chr11:64928099|64928360 hsa-miR-6759-3p 0 1 0
chr11:64928099|64928360 hsa-miR-5587-3p 0 1 0
chr11:64928099|64928360 hsa-miR-4714-5p 0 1 0
chr11:64928099|64928360 hsa-miR-10400-5p 1 0 0
chr11:64928099|64928360 hsa-miR-1233-5p 1 0 0
chr11:64928099|64928360 hsa-miR-4763-3p 1 1 0
chr11:64928099|64928360 hsa-miR-6778-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6787-5p 1 1 0
chr11:64928099|64928360 hsa-miR-6893-5p 0 1 0
chr11:64928099|64928360 hsa-miR-1343-5p 1 1 0
chr11:64928099|64928360 hsa-miR-5001-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6726-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6737-5p 0 1 0
chr11:64928099|64928360 hsa-miR-6743-5p 1 1 0
chr11:64928099|64928360 hsa-miR-6756-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6819-5p 1 1 0
chr11:64928099|64928360 hsa-miR-6722-3p 1 1 0
chr11:64928099|64928360 hsa-miR-6763-5p 1 1 0
chr11:64928099|64928360 hsa-miR-6780a-5p 1 0 0
chr11:64928099|64928360 hsa-miR-3620-5p 1 0 0
chr11:64928099|64928360 hsa-miR-1909-3p 0 1 0
chr11:64928099|64928360 hsa-miR-328-5p 1 0 0
chr11:64928099|64928360 hsa-miR-4685-5p 1 0 0
chr11:64928099|64928360 hsa-miR-4726-5p 1 1 0
chr11:64928099|64928360 hsa-miR-4745-5p 1 1 0
chr11:64928099|64928360 hsa-miR-6735-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6777-5p 0 1 0
chr11:64928099|64928360 hsa-miR-6858-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6845-5p 0 1 0
chr11:64928099|64928360 hsa-miR-1238-5p 1 0 0
chr11:64928099|64928360 hsa-miR-4758-5p 1 0 0
chr11:64928099|64928360 hsa-miR-3085-5p 1 0 0
chr11:64928099|64928360 hsa-miR-6762-5p 1 1 0
chr11:64928099|64928360 hsa-miR-6512-3p 0 1 0
chr11:64928099|64928360 hsa-miR-323b-5p 1 0 0
chr11:64928099|64928360 hsa-miR-10397-5p 0 1 0
chr11:64928099|64928360 hsa-miR-6824-3p 0 1 0
chr11:64928099|64928360 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:64928099|64928360
ORF Type ORF1
Protein Length 65
Nucleotide Length 195
Protein Sequence MWEPESGSGSGSGERSTPGCFHPIPGPSESLPLPCGTTQPGLPTSPSGQTFDPHISWPRRAGSLG
Nucleotide Sequence CTGTGGGAACCAGAGTCAGGGTCAGGGTCAGGGTCAGGGGAAAGGTCCACCCCAGGTTGCTTCCATCCTATCCCTGGCCCCTCAGAGAGCCTGCCCCTGCCTTGTGGTACCACCCAGCCTGGGCTCCCCACTTCACCATCAGGACAAACTTTTGATCCACATATCTCTTGGCCACGGAGGGCTGGAAGTCTGGGC
CircID chr11:64928099|64928360
ORF Type ORF2
Protein Length 84
Nucleotide Length 252
Protein Sequence MVLRYSRSRGSSLSNSSRSCGNQSQGQGQGQGKGPPQVASILSLAPQRACPCLVVPPSLGSPLHHQDKLLIHISLGHGGLEVWA
Nucleotide Sequence ATGGTCTTGAGGTACTCACGCTCCCGGGGATCCTCACTATCAAATAGCTCCAGGAGCTGTGGGAACCAGAGTCAGGGTCAGGGTCAGGGTCAGGGGAAAGGTCCACCCCAGGTTGCTTCCATCCTATCCCTGGCCCCTCAGAGAGCCTGCCCCTGCCTTGTGGTACCACCCAGCCTGGGCTCCCCACTTCACCATCAGGACAAACTTTTGATCCACATATCTCTTGGCCACGGAGGGCTGGAAGTCTGGGCT
CircID chr11:64928099|64928360
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MLPSYPWPLREPAPALWYHPAWAPHFTIRTNF
Nucleotide Sequence TTGCTTCCATCCTATCCCTGGCCCCTCAGAGAGCCTGCCCCTGCCTTGTGGTACCACCCAGCCTGGGCTCCCCACTTCACCATCAGGACAAACTTTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab