CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65032180|65032544
Strand +
CircType exon
Host Gene ENSG00000273003.1;
Algorism CIRI2;
Sequence CTGGGCCCGGGGGAAAGCAGGGAACTCCTCGAGGCGGCGGAAGAGGTTGCGGTGGGTGTAGGCCAGGTCTCCATGCAGCTTGCGGAAGTCGCTGTACCGCTTCCAGACCACCACCTATGAGGTACATGAGACTTGCCCAGAACCAGCAATGGTGGGAGGCAGCCGCCCCCATGCCTAGCCTGCCCCCAGGGGGCGTGAGGATCAGGAAGCAGCTGCAGCAGCCCCTCGCCCAGGGACAGGGAGGAAGGAGGGCCGATGTCCAAGCAGAGTTACCAGCTGCCCCTTGACAGTTTCCAGATCTGGAACTGCAGAACAGTCCCTCTTCCTCCCAGGAGCCTCACCTCTTTGACATCCTCTGGGTCCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65032180|65032544 hsa-miR-583 0 1 1
chr11:65032180|65032544 hsa-miR-611 0 0 1
chr11:65032180|65032544 hsa-miR-612 1 1 1
chr11:65032180|65032544 hsa-miR-617 0 0 1
chr11:65032180|65032544 hsa-miR-618 0 0 1
chr11:65032180|65032544 hsa-miR-631 1 1 1
chr11:65032180|65032544 hsa-miR-637 1 0 1
chr11:65032180|65032544 hsa-miR-1301-5p 0 0 1
chr11:65032180|65032544 hsa-miR-1301-3p 0 0 1
chr11:65032180|65032544 hsa-miR-1236-5p 0 0 1
chr11:65032180|65032544 hsa-miR-1236-3p 0 0 1
chr11:65032180|65032544 hsa-miR-1200 0 0 1
chr11:65032180|65032544 hsa-miR-1205 0 0 1
chr11:65032180|65032544 hsa-miR-1299 0 1 1
chr11:65032180|65032544 hsa-miR-548g-5p 0 0 1
chr11:65032180|65032544 hsa-miR-548g-3p 0 0 1
chr11:65032180|65032544 hsa-miR-1265 0 0 1
chr11:65032180|65032544 hsa-miR-671-5p 0 0 1
chr11:65032180|65032544 hsa-miR-769-5p 0 0 1
chr11:65032180|65032544 hsa-miR-486-3p 0 1 1
chr11:65032180|65032544 hsa-miR-532-3p 0 0 1
chr11:65032180|65032544 hsa-miR-485-5p 0 0 1
chr11:65032180|65032544 hsa-miR-339-5p 0 1 1
chr11:65032180|65032544 hsa-miR-1184 1 1 1
chr11:65032180|65032544 hsa-miR-423-5p 0 0 1
chr11:65032180|65032544 hsa-miR-525-5p 0 0 1
chr11:65032180|65032544 hsa-miR-1224-3p 0 0 1
chr11:65032180|65032544 hsa-miR-1207-3p 0 0 1
chr11:65032180|65032544 hsa-miR-331-3p 0 1 1
chr11:65032180|65032544 hsa-miR-876-3p 0 0 1
chr11:65032180|65032544 hsa-miR-875-3p 0 0 1
chr11:65032180|65032544 hsa-miR-520a-5p 0 0 1
chr11:65032180|65032544 hsa-miR-516a-3p 0 0 1
chr11:65032180|65032544 hsa-miR-151-5p 0 0 1
chr11:65032180|65032544 hsa-miR-1260 0 0 1
chr11:65032180|65032544 hsa-miR-1274a 0 0 1
chr11:65032180|65032544 hsa-miR-1280 0 0 1
chr11:65032180|65032544 hsa-miR-323-5p 0 0 1
chr11:65032180|65032544 hsa-miR-1274b 0 0 1
chr11:65032180|65032544 hsa-miR-138 0 0 1
chr11:65032180|65032544 hsa-miR-1285 0 0 1
chr11:65032180|65032544 hsa-miR-544 0 0 1
chr11:65032180|65032544 hsa-miR-608 1 0 0
chr11:65032180|65032544 hsa-miR-663a 1 0 0
chr11:65032180|65032544 hsa-miR-151b 0 1 0
chr11:65032180|65032544 hsa-miR-762 1 0 0
chr11:65032180|65032544 hsa-miR-1182 1 0 0
chr11:65032180|65032544 hsa-miR-1293 1 0 0
chr11:65032180|65032544 hsa-miR-1913 1 0 0
chr11:65032180|65032544 hsa-miR-711 1 1 0
chr11:65032180|65032544 hsa-miR-718 0 1 0
chr11:65032180|65032544 hsa-miR-3137 1 0 0
chr11:65032180|65032544 hsa-miR-1260b 0 1 0
chr11:65032180|65032544 hsa-miR-3176 0 1 0
chr11:65032180|65032544 hsa-miR-3188 1 0 0
chr11:65032180|65032544 hsa-miR-3196 1 0 0
chr11:65032180|65032544 hsa-miR-4313 0 1 0
chr11:65032180|65032544 hsa-miR-4316 0 1 0
chr11:65032180|65032544 hsa-miR-4257 1 0 0
chr11:65032180|65032544 hsa-miR-4281 1 0 0
chr11:65032180|65032544 hsa-miR-4292 0 1 0
chr11:65032180|65032544 hsa-miR-4290 1 1 0
chr11:65032180|65032544 hsa-miR-3665 1 0 0
chr11:65032180|65032544 hsa-miR-4440 1 0 0
chr11:65032180|65032544 hsa-miR-4462 1 0 0
chr11:65032180|65032544 hsa-miR-3689c 0 1 0
chr11:65032180|65032544 hsa-miR-4486 0 1 0
chr11:65032180|65032544 hsa-miR-4488 1 1 0
chr11:65032180|65032544 hsa-miR-4490 0 1 0
chr11:65032180|65032544 hsa-miR-4505 1 0 0
chr11:65032180|65032544 hsa-miR-3960 1 0 0
chr11:65032180|65032544 hsa-miR-4656 1 0 0
chr11:65032180|65032544 hsa-miR-4683 1 0 0
chr11:65032180|65032544 hsa-miR-4688 1 1 0
chr11:65032180|65032544 hsa-miR-4741 1 0 0
chr11:65032180|65032544 hsa-miR-5047 0 1 0
chr11:65032180|65032544 hsa-miR-5090 1 0 0
chr11:65032180|65032544 hsa-miR-5787 1 0 0
chr11:65032180|65032544 hsa-miR-6069 1 1 0
chr11:65032180|65032544 hsa-miR-6077 0 1 0
chr11:65032180|65032544 hsa-miR-6079 0 1 0
chr11:65032180|65032544 hsa-miR-6085 0 1 0
chr11:65032180|65032544 hsa-miR-6860 1 1 0
chr11:65032180|65032544 hsa-miR-8085 0 1 0
chr11:65032180|65032544 hsa-miR-8089 1 0 0
chr11:65032180|65032544 hsa-miR-6749-3p 0 1 0
chr11:65032180|65032544 hsa-miR-323a-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6765-5p 1 0 0
chr11:65032180|65032544 hsa-miR-7106-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6894-5p 1 0 0
chr11:65032180|65032544 hsa-miR-4687-3p 1 0 0
chr11:65032180|65032544 hsa-miR-125a-3p 1 1 0
chr11:65032180|65032544 hsa-miR-766-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6804-5p 1 1 0
chr11:65032180|65032544 hsa-miR-139-3p 1 0 0
chr11:65032180|65032544 hsa-miR-3934-5p 1 0 0
chr11:65032180|65032544 hsa-miR-4786-5p 1 0 0
chr11:65032180|65032544 hsa-miR-3192-5p 0 1 0
chr11:65032180|65032544 hsa-miR-4709-3p 0 1 0
chr11:65032180|65032544 hsa-miR-6875-3p 0 1 0
chr11:65032180|65032544 hsa-miR-6840-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6762-3p 1 1 0
chr11:65032180|65032544 hsa-miR-6727-5p 1 0 0
chr11:65032180|65032544 hsa-miR-1915-5p 1 0 0
chr11:65032180|65032544 hsa-miR-3151-5p 1 0 0
chr11:65032180|65032544 hsa-miR-659-3p 0 1 0
chr11:65032180|65032544 hsa-miR-3180-3p 0 1 0
chr11:65032180|65032544 hsa-miR-6793-5p 1 0 0
chr11:65032180|65032544 hsa-miR-877-3p 0 1 0
chr11:65032180|65032544 hsa-miR-185-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6829-5p 1 1 0
chr11:65032180|65032544 hsa-miR-6805-5p 1 1 0
chr11:65032180|65032544 hsa-miR-6798-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6782-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6765-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6821-5p 1 0 0
chr11:65032180|65032544 hsa-miR-30b-3p 0 1 0
chr11:65032180|65032544 hsa-miR-6882-3p 0 1 0
chr11:65032180|65032544 hsa-miR-6786-5p 1 0 0
chr11:65032180|65032544 hsa-miR-7109-5p 0 1 0
chr11:65032180|65032544 hsa-miR-3667-3p 0 1 0
chr11:65032180|65032544 hsa-miR-767-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6847-5p 1 1 0
chr11:65032180|65032544 hsa-miR-4667-3p 0 1 0
chr11:65032180|65032544 hsa-miR-4446-5p 1 1 0
chr11:65032180|65032544 hsa-miR-149-3p 1 1 0
chr11:65032180|65032544 hsa-miR-6802-5p 0 1 0
chr11:65032180|65032544 hsa-miR-7106-3p 1 0 0
chr11:65032180|65032544 hsa-miR-584-3p 0 1 0
chr11:65032180|65032544 hsa-miR-6778-3p 0 1 0
chr11:65032180|65032544 hsa-miR-6752-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6886-3p 1 1 0
chr11:65032180|65032544 hsa-miR-5088-3p 1 0 0
chr11:65032180|65032544 hsa-miR-328-3p 1 1 0
chr11:65032180|65032544 hsa-miR-3151-3p 0 1 0
chr11:65032180|65032544 hsa-miR-502-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6748-3p 0 1 0
chr11:65032180|65032544 hsa-miR-19b-1-5p 0 1 0
chr11:65032180|65032544 hsa-miR-10400-5p 1 0 0
chr11:65032180|65032544 hsa-miR-1207-5p 1 0 0
chr11:65032180|65032544 hsa-miR-3689b-3p 0 1 0
chr11:65032180|65032544 hsa-miR-4763-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6812-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6816-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6775-5p 1 0 0
chr11:65032180|65032544 hsa-miR-3180 0 1 0
chr11:65032180|65032544 hsa-miR-5001-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6743-5p 1 1 0
chr11:65032180|65032544 hsa-miR-6756-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6803-5p 1 1 0
chr11:65032180|65032544 hsa-miR-6813-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6779-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6780a-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6797-5p 0 1 0
chr11:65032180|65032544 hsa-miR-4685-3p 1 0 0
chr11:65032180|65032544 hsa-miR-5189-5p 0 1 0
chr11:65032180|65032544 hsa-miR-10396b-5p 1 0 0
chr11:65032180|65032544 hsa-miR-328-5p 1 0 0
chr11:65032180|65032544 hsa-miR-4632-5p 1 0 0
chr11:65032180|65032544 hsa-miR-4649-5p 1 1 0
chr11:65032180|65032544 hsa-miR-4726-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6729-5p 1 1 0
chr11:65032180|65032544 hsa-miR-6848-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6889-5p 1 0 0
chr11:65032180|65032544 hsa-miR-3187-5p 1 1 0
chr11:65032180|65032544 hsa-miR-4697-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6845-5p 1 0 0
chr11:65032180|65032544 hsa-miR-939-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6773-5p 1 0 0
chr11:65032180|65032544 hsa-miR-6791-5p 1 1 0
chr11:65032180|65032544 hsa-miR-6893-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6756-3p 1 1 0
chr11:65032180|65032544 hsa-miR-6805-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6810-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6829-3p 1 0 0
chr11:65032180|65032544 hsa-miR-10400-3p 1 0 0
chr11:65032180|65032544 hsa-miR-3059-5p 1 1 0
chr11:65032180|65032544 hsa-miR-500b-5p 1 0 0
chr11:65032180|65032544 hsa-miR-10394-5p 1 0 0
chr11:65032180|65032544 hsa-miR-33b-3p 1 0 0
chr11:65032180|65032544 hsa-miR-151a-5p 0 1 0
chr11:65032180|65032544 hsa-miR-6737-3p 1 0 0
chr11:65032180|65032544 hsa-miR-6874-3p 0 1 0
chr11:65032180|65032544 hsa-miR-7162-5p 0 1 0
chr11:65032180|65032544 hsa-miR-3922-3p 0 1 0
chr11:65032180|65032544 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:65032180|65032544
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence LGPGESRELLEAAEEVAVGVGQVSMQLAEVAVPLPDHHL
Nucleotide Sequence CTGGGCCCGGGGGAAAGCAGGGAACTCCTCGAGGCGGCGGAAGAGGTTGCGGTGGGTGTAGGCCAGGTCTCCATGCAGCTTGCGGAAGTCGCTGTACCGCTTCCAGACCACCACCTATGA
CircID chr11:65032180|65032544
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MSKQSYQLPLDSFQIWNCRTVPLPPRSLTSLTSSGS
Nucleotide Sequence ATGTCCAAGCAGAGTTACCAGCTGCCCCTTGACAGTTTCCAGATCTGGAACTGCAGAACAGTCCCTCTTCCTCCCAGGAGCCTCACCTCTTTGACATCCTCTGGGTCC
CircID chr11:65032180|65032544
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MRKSLYRFQTTTYEVHETCPEPAMVGGSRPHA
Nucleotide Sequence TTGCGGAAGTCGCTGTACCGCTTCCAGACCACCACCTATGAGGTACATGAGACTTGCCCAGAACCAGCAATGGTGGGAGGCAGCCGCCCCCATGCCTAG
CircID chr11:65032180|65032544
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MRYMRLAQNQQWWEAAAPMPSLPPGGVRIRKQLQQPLAQGQGGRRADVQAELPAAP
Nucleotide Sequence ATGAGGTACATGAGACTTGCCCAGAACCAGCAATGGTGGGAGGCAGCCGCCCCCATGCCTAGCCTGCCCCCAGGGGGCGTGAGGATCAGGAAGCAGCTGCAGCAGCCCCTCGCCCAGGGACAGGGAGGAAGGAGGGCCGATGTCCAAGCAGAGTTACCAGCTGCCCCTTGA
CircID chr11:65032180|65032544
ORF Type ORF5
Protein Length 87
Nucleotide Length 261
Protein Sequence MDIGPPSSLSLGEGLLQLLPDPHAPWGQARHGGGCLPPLLVLGKSHVPHRWWSGSGTATSASCMETWPTPTATSSAASRSSLLSPGP
Nucleotide Sequence TTGGACATCGGCCCTCCTTCCTCCCTGTCCCTGGGCGAGGGGCTGCTGCAGCTGCTTCCTGATCCTCACGCCCCCTGGGGGCAGGCTAGGCATGGGGGCGGCTGCCTCCCACCATTGCTGGTTCTGGGCAAGTCTCATGTACCTCATAGGTGGTGGTCTGGAAGCGGTACAGCGACTTCCGCAAGCTGCATGGAGACCTGGCCTACACCCACCGCAACCTCTTCCGCCGCCTCGAGGAGTTCCCTGCTTTCCCCCGGGCCC
CircID chr11:65032180|65032544
ORF Type ORF6
Protein Length 105
Nucleotide Length 315
Protein Sequence MFCSSRSGNCQGAAGNSAWTSALLPPCPWARGCCSCFLILTPPGGRLGMGAAASHHCWFWASLMYLIGGGLEAVQRLPQAAWRPGLHPPQPLPPPRGVPCFPPGP
Nucleotide Sequence CTGTTCTGCAGTTCCAGATCTGGAAACTGTCAAGGGGCAGCTGGTAACTCTGCTTGGACATCGGCCCTCCTTCCTCCCTGTCCCTGGGCGAGGGGCTGCTGCAGCTGCTTCCTGATCCTCACGCCCCCTGGGGGCAGGCTAGGCATGGGGGCGGCTGCCTCCCACCATTGCTGGTTCTGGGCAAGTCTCATGTACCTCATAGGTGGTGGTCTGGAAGCGGTACAGCGACTTCCGCAAGCTGCATGGAGACCTGGCCTACACCCACCGCAACCTCTTCCGCCGCCTCGAGGAGTTCCCTGCTTTCCCCCGGGCCCA
CircID chr11:65032180|65032544
ORF Type ORF7
Protein Length 31
Nucleotide Length 96
Protein Sequence METVKGQLVTLLGHRPSFLPVPGRGAAAAAS
Nucleotide Sequence CTGGAAACTGTCAAGGGGCAGCTGGTAACTCTGCTTGGACATCGGCCCTCCTTCCTCCCTGTCCCTGGGCGAGGGGCTGCTGCAGCTGCTTCCTGA
CircID chr11:65032180|65032544
ORF Type ORF8
Protein Length 26
Nucleotide Length 78
Protein Sequence MHGDLAYTHRNLFRRLEEFPAFPRAQ
Nucleotide Sequence CTGCATGGAGACCTGGCCTACACCCACCGCAACCTCTTCCGCCGCCTCGAGGAGTTCCCTGCTTTCCCCCGGGCCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab