CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65422981|65423151
Strand +
CircType exon
Host Gene ENSG00000245532.5;
Algorism CIRI2;
Sequence CTCTCCCTGCCTTCCTCCTTCCACACAGACCAGCGCACCCGGGCTCGCTCAGCTATGCAAGAGCGGCGCCCTCCCAGAGGTCAAGTTCCCCCTCCACCAGGCAGTAGGGACAGCCTGGCCTGGAGCGTGGCTGTTCTGCCTGGGGGACCCTGCGGATATTTTCCATGCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65422981|65423151 hsa-miR-192-5p 0 0 1
chr11:65422981|65423151 hsa-miR-192-3p 0 0 1
chr11:65422981|65423151 hsa-miR-215-5p 0 0 1
chr11:65422981|65423151 hsa-miR-215-3p 0 0 1
chr11:65422981|65423151 hsa-miR-326 0 0 1
chr11:65422981|65423151 hsa-miR-448 0 0 1
chr11:65422981|65423151 hsa-miR-625-5p 0 0 1
chr11:65422981|65423151 hsa-miR-625-3p 0 0 1
chr11:65422981|65423151 hsa-miR-661 1 1 1
chr11:65422981|65423151 hsa-miR-940 0 1 1
chr11:65422981|65423151 hsa-miR-361-3p 0 1 1
chr11:65422981|65423151 hsa-miR-1207-5p 0 1 1
chr11:65422981|65423151 hsa-miR-330-5p 0 0 1
chr11:65422981|65423151 hsa-miR-153 0 0 1
chr11:65422981|65423151 hsa-miR-644 0 0 1
chr11:65422981|65423151 hsa-miR-1254 0 0 1
chr11:65422981|65423151 hsa-miR-147 0 0 1
chr11:65422981|65423151 hsa-miR-663a 1 0 0
chr11:65422981|65423151 hsa-miR-658 1 0 0
chr11:65422981|65423151 hsa-miR-548l 0 1 0
chr11:65422981|65423151 hsa-miR-1538 1 1 0
chr11:65422981|65423151 hsa-miR-3154 1 0 0
chr11:65422981|65423151 hsa-miR-3911 1 1 0
chr11:65422981|65423151 hsa-miR-4449 1 0 0
chr11:65422981|65423151 hsa-miR-4466 1 0 0
chr11:65422981|65423151 hsa-miR-4476 1 1 0
chr11:65422981|65423151 hsa-miR-3689c 0 1 0
chr11:65422981|65423151 hsa-miR-4507 1 0 0
chr11:65422981|65423151 hsa-miR-4533 1 1 0
chr11:65422981|65423151 hsa-miR-1587 1 0 0
chr11:65422981|65423151 hsa-miR-4651 1 0 0
chr11:65422981|65423151 hsa-miR-4657 1 0 0
chr11:65422981|65423151 hsa-miR-4669 1 0 0
chr11:65422981|65423151 hsa-miR-4673 0 1 0
chr11:65422981|65423151 hsa-miR-4739 1 1 0
chr11:65422981|65423151 hsa-miR-4741 1 0 0
chr11:65422981|65423151 hsa-miR-5194 1 0 0
chr11:65422981|65423151 hsa-miR-6131 1 1 0
chr11:65422981|65423151 hsa-miR-6133 1 0 0
chr11:65422981|65423151 hsa-miR-6745 1 0 0
chr11:65422981|65423151 hsa-miR-9899 1 1 0
chr11:65422981|65423151 hsa-miR-12118 0 1 0
chr11:65422981|65423151 hsa-miR-6747-5p 1 0 0
chr11:65422981|65423151 hsa-miR-7106-5p 1 0 0
chr11:65422981|65423151 hsa-miR-1972 0 1 0
chr11:65422981|65423151 hsa-miR-6799-5p 1 0 0
chr11:65422981|65423151 hsa-miR-3692-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6833-5p 1 1 0
chr11:65422981|65423151 hsa-miR-5187-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6515-5p 1 1 0
chr11:65422981|65423151 hsa-miR-6089 1 0 0
chr11:65422981|65423151 hsa-miR-3192-5p 1 1 0
chr11:65422981|65423151 hsa-miR-6880-5p 1 1 0
chr11:65422981|65423151 hsa-miR-7847-3p 1 1 0
chr11:65422981|65423151 hsa-miR-6867-5p 1 1 0
chr11:65422981|65423151 hsa-miR-7160-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6840-5p 0 1 0
chr11:65422981|65423151 hsa-miR-6741-5p 1 0 0
chr11:65422981|65423151 hsa-miR-3663-5p 1 1 0
chr11:65422981|65423151 hsa-miR-3180-3p 1 0 0
chr11:65422981|65423151 hsa-miR-6748-5p 1 0 0
chr11:65422981|65423151 hsa-miR-3190-3p 1 1 0
chr11:65422981|65423151 hsa-miR-6798-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6821-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6786-5p 1 0 0
chr11:65422981|65423151 hsa-miR-7109-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6740-5p 1 0 0
chr11:65422981|65423151 hsa-miR-4640-5p 1 0 0
chr11:65422981|65423151 hsa-miR-3202 1 0 0
chr11:65422981|65423151 hsa-miR-149-3p 1 0 0
chr11:65422981|65423151 hsa-miR-7112-5p 0 1 0
chr11:65422981|65423151 hsa-miR-7152-3p 1 0 0
chr11:65422981|65423151 hsa-miR-6743-3p 0 1 0
chr11:65422981|65423151 hsa-miR-589-3p 0 1 0
chr11:65422981|65423151 hsa-miR-1233-5p 1 0 0
chr11:65422981|65423151 hsa-miR-1273h-5p 1 0 0
chr11:65422981|65423151 hsa-miR-3689b-3p 0 1 0
chr11:65422981|65423151 hsa-miR-4763-3p 1 0 0
chr11:65422981|65423151 hsa-miR-6769b-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6778-5p 1 1 0
chr11:65422981|65423151 hsa-miR-6787-5p 1 0 0
chr11:65422981|65423151 hsa-miR-1343-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6756-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6803-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6851-5p 1 0 0
chr11:65422981|65423151 hsa-miR-7107-5p 1 0 0
chr11:65422981|65423151 hsa-miR-10401-5p 1 0 0
chr11:65422981|65423151 hsa-miR-11181-3p 0 1 0
chr11:65422981|65423151 hsa-miR-1249-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6779-5p 1 1 0
chr11:65422981|65423151 hsa-miR-6780a-5p 1 1 0
chr11:65422981|65423151 hsa-miR-6797-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6808-5p 0 1 0
chr11:65422981|65423151 hsa-miR-7111-5p 1 0 0
chr11:65422981|65423151 hsa-miR-3620-5p 1 0 0
chr11:65422981|65423151 hsa-miR-4728-5p 1 1 0
chr11:65422981|65423151 hsa-miR-6780b-5p 1 0 0
chr11:65422981|65423151 hsa-miR-1237-5p 1 0 0
chr11:65422981|65423151 hsa-miR-328-5p 1 0 0
chr11:65422981|65423151 hsa-miR-4725-3p 1 0 0
chr11:65422981|65423151 hsa-miR-675-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6794-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6795-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6858-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6883-5p 0 1 0
chr11:65422981|65423151 hsa-miR-6887-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6885-5p 1 1 0
chr11:65422981|65423151 hsa-miR-939-5p 1 1 0
chr11:65422981|65423151 hsa-miR-4769-5p 1 0 0
chr11:65422981|65423151 hsa-miR-10394-3p 1 0 0
chr11:65422981|65423151 hsa-miR-1910-3p 0 1 0
chr11:65422981|65423151 hsa-miR-3940-5p 1 0 0
chr11:65422981|65423151 hsa-miR-1199-5p 1 0 0
chr11:65422981|65423151 hsa-miR-1914-3p 1 0 0
chr11:65422981|65423151 hsa-miR-3173-3p 0 1 0
chr11:65422981|65423151 hsa-miR-4747-5p 1 0 0
chr11:65422981|65423151 hsa-miR-6876-5p 1 1 0
chr11:65422981|65423151 hsa-miR-6891-5p 0 1 0
chr11:65422981|65423151 hsa-miR-4716-3p 0 1 0
chr11:65422981|65423151 hsa-miR-6785-5p 1 1 0
chr11:65422981|65423151 hsa-miR-342-5p 1 0 0
chr11:65422981|65423151 hsa-miR-494-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:65422981|65423151
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MPSSFHTDQRTRARSAMQERRPPRGQVPPPPGSRDSLAWSVAVLPGGPCGYFPCS
Nucleotide Sequence CTGCCTTCCTCCTTCCACACAGACCAGCGCACCCGGGCTCGCTCAGCTATGCAAGAGCGGCGCCCTCCCAGAGGTCAAGTTCCCCCTCCACCAGGCAGTAGGGACAGCCTGGCCTGGAGCGTGGCTGTTCTGCCTGGGGGACCCTGCGGATATTTTCCATGCAGC
CircID chr11:65422981|65423151
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence LHGKYPQGPPGRTATLQARLSLLPGGGGT
Nucleotide Sequence CTGCATGGAAAATATCCGCAGGGTCCCCCAGGCAGAACAGCCACGCTCCAGGCCAGGCTGTCCCTACTGCCTGGTGGAGGGGGAACTTGA
CircID chr11:65422981|65423151
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MGGRRSCIAERARVRWSVWKEEGRE
Nucleotide Sequence CTGGGAGGGCGCCGCTCTTGCATAGCTGAGCGAGCCCGGGTGCGCTGGTCTGTGTGGAAGGAGGAAGGCAGGGAG
CircID chr11:65422981|65423151
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MENIRRVPQAEQPRSRPGCPYCLVEGELDLWEGAALA
Nucleotide Sequence ATGGAAAATATCCGCAGGGTCCCCCAGGCAGAACAGCCACGCTCCAGGCCAGGCTGTCCCTACTGCCTGGTGGAGGGGGAACTTGACCTCTGGGAGGGCGCCGCTCTTGCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab