CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65423785|65423945
Strand +
CircType exon
Host Gene ENSG00000245532.5;
Algorism CIRI2;
Sequence GGTCCATGAAGCATTTTTGTAACTTTCAGCTGGATGGCTGCAGGCCCACCCAAGGGTGCACATTCACTCCCCACCCTCTCTGCAGGCAAGCAACACCGATCCGCCCCACCCCAGCCTCAGCGGGAAGGCCTCTCTTCCTCCACCATTACCAACAATACCGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65423785|65423945 hsa-miR-608 1 0 1
chr11:65423785|65423945 hsa-miR-765 0 0 1
chr11:65423785|65423945 hsa-miR-541-5p 0 0 1
chr11:65423785|65423945 hsa-miR-541-3p 0 0 1
chr11:65423785|65423945 hsa-miR-939-5p 0 0 1
chr11:65423785|65423945 hsa-miR-939-3p 0 0 1
chr11:65423785|65423945 hsa-miR-1293 1 0 1
chr11:65423785|65423945 hsa-miR-1257 0 0 1
chr11:65423785|65423945 hsa-miR-1262 0 0 1
chr11:65423785|65423945 hsa-miR-491-5p 0 0 1
chr11:65423785|65423945 hsa-miR-485-5p 0 0 1
chr11:65423785|65423945 hsa-miR-1184 0 0 1
chr11:65423785|65423945 hsa-miR-654-5p 0 0 1
chr11:65423785|65423945 hsa-miR-490-5p 0 0 1
chr11:65423785|65423945 hsa-miR-524-5p 0 0 1
chr11:65423785|65423945 hsa-miR-342-5p 0 0 1
chr11:65423785|65423945 hsa-miR-520d-5p 0 0 1
chr11:65423785|65423945 hsa-miR-637 1 0 0
chr11:65423785|65423945 hsa-miR-663a 1 0 0
chr11:65423785|65423945 hsa-miR-762 1 0 0
chr11:65423785|65423945 hsa-miR-2861 1 0 0
chr11:65423785|65423945 hsa-miR-3141 1 0 0
chr11:65423785|65423945 hsa-miR-3188 1 0 0
chr11:65423785|65423945 hsa-miR-3196 1 0 0
chr11:65423785|65423945 hsa-miR-4270 1 0 0
chr11:65423785|65423945 hsa-miR-3621 1 0 0
chr11:65423785|65423945 hsa-miR-4430 1 0 0
chr11:65423785|65423945 hsa-miR-4463 1 0 0
chr11:65423785|65423945 hsa-miR-4488 1 0 0
chr11:65423785|65423945 hsa-miR-4492 1 0 0
chr11:65423785|65423945 hsa-miR-4498 1 0 0
chr11:65423785|65423945 hsa-miR-4505 1 0 0
chr11:65423785|65423945 hsa-miR-4507 1 0 0
chr11:65423785|65423945 hsa-miR-4508 1 0 0
chr11:65423785|65423945 hsa-miR-1587 1 0 0
chr11:65423785|65423945 hsa-miR-4651 1 0 0
chr11:65423785|65423945 hsa-miR-4656 1 0 0
chr11:65423785|65423945 hsa-miR-4689 1 0 0
chr11:65423785|65423945 hsa-miR-4706 1 0 0
chr11:65423785|65423945 hsa-miR-4739 1 0 0
chr11:65423785|65423945 hsa-miR-5572 1 0 0
chr11:65423785|65423945 hsa-miR-5739 1 0 0
chr11:65423785|65423945 hsa-miR-5787 1 0 0
chr11:65423785|65423945 hsa-miR-6085 1 0 0
chr11:65423785|65423945 hsa-miR-6086 1 0 0
chr11:65423785|65423945 hsa-miR-6127 1 0 0
chr11:65423785|65423945 hsa-miR-6745 1 0 0
chr11:65423785|65423945 hsa-miR-7704 1 0 0
chr11:65423785|65423945 hsa-miR-8085 1 0 0
chr11:65423785|65423945 hsa-miR-8089 1 0 0
chr11:65423785|65423945 hsa-miR-9986 1 0 0
chr11:65423785|65423945 hsa-miR-12114 1 0 0
chr11:65423785|65423945 hsa-miR-92a-1-5p 1 0 0
chr11:65423785|65423945 hsa-miR-92a-2-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4731-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6747-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6765-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6894-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6728-5p 1 0 0
chr11:65423785|65423945 hsa-miR-8071 1 0 0
chr11:65423785|65423945 hsa-miR-1227-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6089 1 0 0
chr11:65423785|65423945 hsa-miR-6880-5p 1 0 0
chr11:65423785|65423945 hsa-miR-7847-3p 1 0 0
chr11:65423785|65423945 hsa-miR-7160-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6721-5p 1 0 0
chr11:65423785|65423945 hsa-miR-5589-5p 1 0 0
chr11:65423785|65423945 hsa-miR-1915-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6742-5p 1 0 0
chr11:65423785|65423945 hsa-miR-3151-5p 1 0 0
chr11:65423785|65423945 hsa-miR-3180-3p 1 0 0
chr11:65423785|65423945 hsa-miR-6782-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6786-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4763-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6784-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4787-5p 1 0 0
chr11:65423785|65423945 hsa-miR-149-3p 1 0 0
chr11:65423785|65423945 hsa-miR-3162-5p 1 0 0
chr11:65423785|65423945 hsa-miR-3158-5p 1 0 0
chr11:65423785|65423945 hsa-miR-1250-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6832-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4750-5p 1 0 0
chr11:65423785|65423945 hsa-miR-503-3p 1 0 0
chr11:65423785|65423945 hsa-miR-3675-5p 1 0 0
chr11:65423785|65423945 hsa-miR-1207-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4763-3p 1 0 0
chr11:65423785|65423945 hsa-miR-6769b-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6787-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6812-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6816-5p 1 0 0
chr11:65423785|65423945 hsa-miR-1343-5p 1 0 0
chr11:65423785|65423945 hsa-miR-3180 1 0 0
chr11:65423785|65423945 hsa-miR-5001-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6737-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6752-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6754-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6756-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6803-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6813-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6819-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6842-5p 1 0 0
chr11:65423785|65423945 hsa-miR-11181-3p 1 0 0
chr11:65423785|65423945 hsa-miR-1249-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6722-3p 1 0 0
chr11:65423785|65423945 hsa-miR-6751-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6779-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6797-5p 1 0 0
chr11:65423785|65423945 hsa-miR-7111-5p 1 0 0
chr11:65423785|65423945 hsa-miR-3620-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4728-5p 1 0 0
chr11:65423785|65423945 hsa-miR-10396b-5p 1 0 0
chr11:65423785|65423945 hsa-miR-1237-5p 1 0 0
chr11:65423785|65423945 hsa-miR-1909-3p 1 0 0
chr11:65423785|65423945 hsa-miR-4745-5p 1 0 0
chr11:65423785|65423945 hsa-miR-675-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6777-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6846-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6848-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6883-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4758-5p 1 0 0
chr11:65423785|65423945 hsa-miR-4769-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6511b-5p 1 0 0
chr11:65423785|65423945 hsa-miR-3940-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6758-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6856-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6855-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6766-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6785-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6791-5p 1 0 0
chr11:65423785|65423945 hsa-miR-6884-5p 1 0 0
chr11:65423785|65423945 hsa-miR-128-2-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:65423785|65423945
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MAAGPPKGAHSLPTLSAGKQHRSAPPQPQREGLSSSTITNNT
Nucleotide Sequence ATGGCTGCAGGCCCACCCAAGGGTGCACATTCACTCCCCACCCTCTCTGCAGGCAAGCAACACCGATCCGCCCCACCCCAGCCTCAGCGGGAAGGCCTCTCTTCCTCCACCATTACCAACAATACC
CircID chr11:65423785|65423945
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MQAHPRVHIHSPPSLQASNTDPPHPSLSGKASLPPPLPTIP
Nucleotide Sequence CTGCAGGCCCACCCAAGGGTGCACATTCACTCCCCACCCTCTCTGCAGGCAAGCAACACCGATCCGCCCCACCCCAGCCTCAGCGGGAAGGCCTCTCTTCCTCCACCATTACCAACAATACCG
CircID chr11:65423785|65423945
ORF Type ORF3
Protein Length 52
Nucleotide Length 156
Protein Sequence MKHFCNFQLDGCRPTQGCTFTPHPLCRQATPIRPTPASAGRPLFLHHYQQYR
Nucleotide Sequence ATGAAGCATTTTTGTAACTTTCAGCTGGATGGCTGCAGGCCCACCCAAGGGTGCACATTCACTCCCCACCCTCTCTGCAGGCAAGCAACACCGATCCGCCCCACCCCAGCCTCAGCGGGAAGGCCTCTCTTCCTCCACCATTACCAACAATACCGA
CircID chr11:65423785|65423945
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MPAERVGSECAPLGGPAAIQLKVTKMLHG
Nucleotide Sequence TTGCCTGCAGAGAGGGTGGGGAGTGAATGTGCACCCTTGGGTGGGCCTGCAGCCATCCAGCTGAAAGTTACAAAAATGCTTCATGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab