CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65424451|65424660
Strand +
CircType exon
Host Gene ENSG00000245532.5;
Algorism CIRI2;
Sequence CCTCCCAGCGTTTAGCACAACACAATGACACCCTTAATTTGACAATCTGCTTCCTCTAATATATCCCCAGTCTAAGGCATTTAAAATTAAACAGCTCTTCAACGCCCCAAGTTATTTCATCAGGCTAAGAACTTCTCCGAGAAACGCACAAGAAGGCAGGCAAACAGGTGGGTAGGTGAGAGGTCACGGGGCTCCATCTGCAAGCTCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65424451|65424660 hsa-miR-210-5p 0 0 1
chr11:65424451|65424660 hsa-miR-210-3p 0 0 1
chr11:65424451|65424660 hsa-miR-578 0 1 1
chr11:65424451|65424660 hsa-miR-581 0 0 1
chr11:65424451|65424660 hsa-miR-596 1 0 1
chr11:65424451|65424660 hsa-miR-616-5p 0 0 1
chr11:65424451|65424660 hsa-miR-616-3p 0 0 1
chr11:65424451|65424660 hsa-miR-656-5p 0 0 1
chr11:65424451|65424660 hsa-miR-656-3p 0 0 1
chr11:65424451|65424660 hsa-miR-147b-5p 0 0 1
chr11:65424451|65424660 hsa-miR-147b-3p 0 0 1
chr11:65424451|65424660 hsa-miR-877-5p 0 0 1
chr11:65424451|65424660 hsa-miR-877-3p 0 0 1
chr11:65424451|65424660 hsa-miR-1229-5p 0 0 1
chr11:65424451|65424660 hsa-miR-1229-3p 0 0 1
chr11:65424451|65424660 hsa-miR-1248 0 0 1
chr11:65424451|65424660 hsa-miR-1225-3p 0 1 1
chr11:65424451|65424660 hsa-miR-1224-3p 0 0 1
chr11:65424451|65424660 hsa-miR-532-5p 0 0 1
chr11:65424451|65424660 hsa-miR-590-3p 0 0 1
chr11:65424451|65424660 hsa-miR-218 0 0 1
chr11:65424451|65424660 hsa-miR-1201 0 0 1
chr11:65424451|65424660 hsa-miR-151-3p 0 0 1
chr11:65424451|65424660 hsa-miR-219-5p 0 0 1
chr11:65424451|65424660 hsa-miR-1268a 1 0 0
chr11:65424451|65424660 hsa-miR-3125 0 1 0
chr11:65424451|65424660 hsa-miR-3196 1 0 0
chr11:65424451|65424660 hsa-miR-4260 0 1 0
chr11:65424451|65424660 hsa-miR-3652 1 0 0
chr11:65424451|65424660 hsa-miR-3936 1 0 0
chr11:65424451|65424660 hsa-miR-1268b 1 0 0
chr11:65424451|65424660 hsa-miR-4450 1 0 0
chr11:65424451|65424660 hsa-miR-4463 1 1 0
chr11:65424451|65424660 hsa-miR-2392 1 0 0
chr11:65424451|65424660 hsa-miR-4510 1 0 0
chr11:65424451|65424660 hsa-miR-4516 1 0 0
chr11:65424451|65424660 hsa-miR-4533 1 0 0
chr11:65424451|65424660 hsa-miR-5572 1 0 0
chr11:65424451|65424660 hsa-miR-5787 1 0 0
chr11:65424451|65424660 hsa-miR-6077 1 0 0
chr11:65424451|65424660 hsa-miR-6127 1 0 0
chr11:65424451|65424660 hsa-miR-6129 1 0 0
chr11:65424451|65424660 hsa-miR-6130 1 1 0
chr11:65424451|65424660 hsa-miR-6133 1 0 0
chr11:65424451|65424660 hsa-miR-8082 0 1 0
chr11:65424451|65424660 hsa-miR-8089 1 0 0
chr11:65424451|65424660 hsa-miR-12125 0 1 0
chr11:65424451|65424660 hsa-miR-6747-3p 0 1 0
chr11:65424451|65424660 hsa-miR-6747-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6825-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6804-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6727-5p 1 0 0
chr11:65424451|65424660 hsa-miR-4655-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6742-5p 1 0 0
chr11:65424451|65424660 hsa-miR-3180-3p 1 0 0
chr11:65424451|65424660 hsa-miR-6772-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6874-5p 0 1 0
chr11:65424451|65424660 hsa-miR-6835-5p 1 0 0
chr11:65424451|65424660 hsa-miR-193b-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6894-3p 0 1 0
chr11:65424451|65424660 hsa-miR-6821-3p 0 1 0
chr11:65424451|65424660 hsa-miR-6717-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6824-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6789-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6854-3p 0 1 0
chr11:65424451|65424660 hsa-miR-520g-5p 1 1 0
chr11:65424451|65424660 hsa-miR-6779-3p 0 1 0
chr11:65424451|65424660 hsa-miR-3675-5p 0 1 0
chr11:65424451|65424660 hsa-miR-6732-3p 1 0 0
chr11:65424451|65424660 hsa-miR-2116-5p 0 1 0
chr11:65424451|65424660 hsa-miR-6787-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6812-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6816-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6865-5p 1 0 0
chr11:65424451|65424660 hsa-miR-3180 1 0 0
chr11:65424451|65424660 hsa-miR-6737-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6752-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6756-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6803-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6819-5p 1 0 0
chr11:65424451|65424660 hsa-miR-7110-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6751-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6763-5p 1 0 0
chr11:65424451|65424660 hsa-miR-6754-3p 1 0 0
chr11:65424451|65424660 hsa-miR-6780b-5p 1 0 0
chr11:65424451|65424660 hsa-miR-3085-5p 1 0 0
chr11:65424451|65424660 hsa-miR-4700-5p 1 0 0
chr11:65424451|65424660 hsa-miR-3679-5p 1 0 0
chr11:65424451|65424660 hsa-miR-4667-5p 1 1 0
chr11:65424451|65424660 hsa-miR-6511a-3p 1 0 0
chr11:65424451|65424660 hsa-miR-6511b-3p 1 0 0
chr11:65424451|65424660 hsa-miR-6820-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:65424451|65424660
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MLPLIYPQSKAFKIKQLFNAPSYFIRLRTSPRNAQEGRQTGG
Nucleotide Sequence CTGCTTCCTCTAATATATCCCCAGTCTAAGGCATTTAAAATTAAACAGCTCTTCAACGCCCCAAGTTATTTCATCAGGCTAAGAACTTCTCCGAGAAACGCACAAGAAGGCAGGCAAACAGGTGGGTAG
CircID chr11:65424451|65424660
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MQMEPRDLSPTHLFACLLVRFSEKFLA
Nucleotide Sequence TTGCAGATGGAGCCCCGTGACCTCTCACCTACCCACCTGTTTGCCTGCCTTCTTGTGCGTTTCTCGGAGAAGTTCTTAGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab