CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65424695|65424919
Strand +
CircType exon
Host Gene ENSG00000245532.5;
Algorism CIRI2;
Sequence GCCCACGGGACCGGTGCCAAGCTGTCCCCTTCTCCCCGTCCCCCACAACTCCCACCTCAGGGTCCTCTTACTAGAATGCCAAGAAAGTATTATGAAATCTAACGAAGTAAAGTTCAAGTTTAAAAAAACGAAGCAAGAACAAAAGAGCACTACCGGTGTACCCACCATTCCCTTCTCCTAGTAATCTGCAATGCAATCACAATGCCCAAACTAGACCTGCCATTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65424695|65424919 hsa-miR-33a-5p 0 0 1
chr11:65424695|65424919 hsa-miR-33a-3p 0 0 1
chr11:65424695|65424919 hsa-miR-96-5p 0 0 1
chr11:65424695|65424919 hsa-miR-96-3p 0 0 1
chr11:65424695|65424919 hsa-miR-200b-5p 0 0 1
chr11:65424695|65424919 hsa-miR-200b-3p 0 0 1
chr11:65424695|65424919 hsa-miR-200c-5p 0 0 1
chr11:65424695|65424919 hsa-miR-200c-3p 0 0 1
chr11:65424695|65424919 hsa-miR-375-5p 0 0 1
chr11:65424695|65424919 hsa-miR-375-3p 0 0 1
chr11:65424695|65424919 hsa-miR-325 0 0 1
chr11:65424695|65424919 hsa-miR-429 0 0 1
chr11:65424695|65424919 hsa-miR-520f-5p 0 0 1
chr11:65424695|65424919 hsa-miR-520f-3p 0 0 1
chr11:65424695|65424919 hsa-miR-504-5p 0 0 1
chr11:65424695|65424919 hsa-miR-504-3p 0 0 1
chr11:65424695|65424919 hsa-miR-578 0 0 1
chr11:65424695|65424919 hsa-miR-601 1 0 1
chr11:65424695|65424919 hsa-miR-625-5p 0 0 1
chr11:65424695|65424919 hsa-miR-625-3p 0 0 1
chr11:65424695|65424919 hsa-miR-33b-5p 0 0 1
chr11:65424695|65424919 hsa-miR-33b-3p 0 0 1
chr11:65424695|65424919 hsa-miR-1271-5p 0 0 1
chr11:65424695|65424919 hsa-miR-1271-3p 0 0 1
chr11:65424695|65424919 hsa-miR-541-5p 0 0 1
chr11:65424695|65424919 hsa-miR-541-3p 0 0 1
chr11:65424695|65424919 hsa-miR-1256 0 0 1
chr11:65424695|65424919 hsa-miR-1275 0 0 1
chr11:65424695|65424919 hsa-miR-512-3p 0 0 1
chr11:65424695|65424919 hsa-miR-491-5p 0 0 1
chr11:65424695|65424919 hsa-miR-1225-5p 0 1 1
chr11:65424695|65424919 hsa-miR-654-5p 0 0 1
chr11:65424695|65424919 hsa-miR-628-3p 0 1 1
chr11:65424695|65424919 hsa-miR-1207-5p 1 0 1
chr11:65424695|65424919 hsa-miR-125a-5p 0 0 1
chr11:65424695|65424919 hsa-miR-369-3p 0 0 1
chr11:65424695|65424919 hsa-miR-125b 0 0 1
chr11:65424695|65424919 hsa-miR-608 1 0 0
chr11:65424695|65424919 hsa-miR-611 1 0 0
chr11:65424695|65424919 hsa-miR-663a 1 0 0
chr11:65424695|65424919 hsa-miR-658 1 0 0
chr11:65424695|65424919 hsa-miR-762 1 0 0
chr11:65424695|65424919 hsa-miR-920 1 0 0
chr11:65424695|65424919 hsa-miR-1268a 1 0 0
chr11:65424695|65424919 hsa-miR-3141 1 0 0
chr11:65424695|65424919 hsa-miR-3147 1 0 0
chr11:65424695|65424919 hsa-miR-3154 1 1 0
chr11:65424695|65424919 hsa-miR-1193 1 0 0
chr11:65424695|65424919 hsa-miR-3196 1 0 0
chr11:65424695|65424919 hsa-miR-4322 1 0 0
chr11:65424695|65424919 hsa-miR-3621 1 0 0
chr11:65424695|65424919 hsa-miR-1268b 1 0 0
chr11:65424695|65424919 hsa-miR-4466 1 0 0
chr11:65424695|65424919 hsa-miR-4488 1 0 0
chr11:65424695|65424919 hsa-miR-2392 1 0 0
chr11:65424695|65424919 hsa-miR-4507 1 0 0
chr11:65424695|65424919 hsa-miR-4516 1 1 0
chr11:65424695|65424919 hsa-miR-4525 1 0 0
chr11:65424695|65424919 hsa-miR-1587 1 0 0
chr11:65424695|65424919 hsa-miR-4642 0 1 0
chr11:65424695|65424919 hsa-miR-4651 1 0 0
chr11:65424695|65424919 hsa-miR-4654 1 0 0
chr11:65424695|65424919 hsa-miR-4706 1 1 0
chr11:65424695|65424919 hsa-miR-4736 1 1 0
chr11:65424695|65424919 hsa-miR-4739 1 0 0
chr11:65424695|65424919 hsa-miR-4751 1 1 0
chr11:65424695|65424919 hsa-miR-5698 1 0 0
chr11:65424695|65424919 hsa-miR-5703 0 1 0
chr11:65424695|65424919 hsa-miR-5787 1 0 0
chr11:65424695|65424919 hsa-miR-6085 1 0 0
chr11:65424695|65424919 hsa-miR-6086 1 0 0
chr11:65424695|65424919 hsa-miR-6127 1 0 0
chr11:65424695|65424919 hsa-miR-6129 1 0 0
chr11:65424695|65424919 hsa-miR-6134 0 1 0
chr11:65424695|65424919 hsa-miR-7515 0 1 0
chr11:65424695|65424919 hsa-miR-8072 1 0 0
chr11:65424695|65424919 hsa-miR-8085 1 0 0
chr11:65424695|65424919 hsa-miR-12114 1 0 0
chr11:65424695|65424919 hsa-miR-12119 1 0 0
chr11:65424695|65424919 hsa-miR-4433b-3p 1 0 0
chr11:65424695|65424919 hsa-miR-6765-5p 1 0 0
chr11:65424695|65424919 hsa-miR-7106-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6825-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6894-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6799-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6728-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6757-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6880-5p 1 0 0
chr11:65424695|65424919 hsa-miR-7847-3p 1 1 0
chr11:65424695|65424919 hsa-miR-6746-5p 1 1 0
chr11:65424695|65424919 hsa-miR-4653-3p 1 0 0
chr11:65424695|65424919 hsa-miR-7154-3p 1 0 0
chr11:65424695|65424919 hsa-miR-6742-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6716-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6871-5p 1 0 0
chr11:65424695|65424919 hsa-miR-3151-5p 1 0 0
chr11:65424695|65424919 hsa-miR-1292-5p 1 0 0
chr11:65424695|65424919 hsa-miR-3180-3p 1 0 0
chr11:65424695|65424919 hsa-miR-6796-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6805-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6798-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6770-5p 1 1 0
chr11:65424695|65424919 hsa-miR-486-3p 0 1 0
chr11:65424695|65424919 hsa-miR-6760-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6782-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6810-5p 1 0 0
chr11:65424695|65424919 hsa-miR-7109-5p 1 0 0
chr11:65424695|65424919 hsa-miR-1908-5p 1 0 0
chr11:65424695|65424919 hsa-miR-1228-5p 1 0 0
chr11:65424695|65424919 hsa-miR-92b-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6847-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6834-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4787-5p 1 0 0
chr11:65424695|65424919 hsa-miR-149-3p 1 0 0
chr11:65424695|65424919 hsa-miR-6802-5p 1 0 0
chr11:65424695|65424919 hsa-miR-5010-5p 1 0 0
chr11:65424695|65424919 hsa-miR-7162-3p 1 1 0
chr11:65424695|65424919 hsa-miR-3191-3p 1 0 0
chr11:65424695|65424919 hsa-let-7e-5p 1 0 0
chr11:65424695|65424919 hsa-miR-10400-5p 1 0 0
chr11:65424695|65424919 hsa-miR-1233-5p 1 1 0
chr11:65424695|65424919 hsa-miR-4763-3p 1 0 0
chr11:65424695|65424919 hsa-miR-6769b-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6778-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6787-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6812-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6816-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6865-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6870-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6893-5p 1 0 0
chr11:65424695|65424919 hsa-miR-1343-5p 1 0 0
chr11:65424695|65424919 hsa-miR-3180 1 0 0
chr11:65424695|65424919 hsa-miR-6726-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6737-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6743-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6752-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6756-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6769a-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6803-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6819-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6851-5p 1 0 0
chr11:65424695|65424919 hsa-miR-7110-5p 1 0 0
chr11:65424695|65424919 hsa-miR-10401-5p 1 0 0
chr11:65424695|65424919 hsa-miR-11181-3p 1 0 0
chr11:65424695|65424919 hsa-miR-1249-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6751-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6779-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6780a-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6788-5p 0 1 0
chr11:65424695|65424919 hsa-miR-6797-5p 1 0 0
chr11:65424695|65424919 hsa-miR-7111-5p 1 0 0
chr11:65424695|65424919 hsa-miR-3620-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4728-5p 1 0 0
chr11:65424695|65424919 hsa-miR-5196-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6780b-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6862-5p 1 0 0
chr11:65424695|65424919 hsa-miR-10396b-5p 1 0 0
chr11:65424695|65424919 hsa-miR-1237-5p 1 0 0
chr11:65424695|65424919 hsa-miR-328-5p 1 0 0
chr11:65424695|65424919 hsa-miR-3689a-3p 1 0 0
chr11:65424695|65424919 hsa-miR-4649-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4725-3p 1 0 0
chr11:65424695|65424919 hsa-miR-4749-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6729-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6777-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6794-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6795-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6846-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6848-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6858-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6887-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6889-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4697-5p 1 0 0
chr11:65424695|65424919 hsa-miR-939-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4769-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6731-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6856-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4665-5p 1 1 0
chr11:65424695|65424919 hsa-miR-6855-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4646-5p 1 0 0
chr11:65424695|65424919 hsa-miR-4747-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6766-5p 1 0 0
chr11:65424695|65424919 hsa-miR-6791-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:65424695|65424919
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MSPSPRPPQLPPQGPLTRMPRKYYEI
Nucleotide Sequence CTGTCCCCTTCTCCCCGTCCCCCACAACTCCCACCTCAGGGTCCTCTTACTAGAATGCCAAGAAAGTATTATGAAATCTAA
CircID chr11:65424695|65424919
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MKSNEVKFKFKKTKQEQKSTTGVPTIPFS
Nucleotide Sequence ATGAAATCTAACGAAGTAAAGTTCAAGTTTAAAAAAACGAAGCAAGAACAAAAGAGCACTACCGGTGTACCCACCATTCCCTTCTCCTAG
CircID chr11:65424695|65424919
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MVGTPVVLFCSCFVFLNLNFTSLDFIILSWHSSKRTLRWELWGTGRRGQLGTGPVG
Nucleotide Sequence ATGGTGGGTACACCGGTAGTGCTCTTTTGTTCTTGCTTCGTTTTTTTAAACTTGAACTTTACTTCGTTAGATTTCATAATACTTTCTTGGCATTCTAGTAAGAGGACCCTGAGGTGGGAGTTGTGGGGGACGGGGAGAAGGGGACAGCTTGGCACCGGTCCCGTGGGC
CircID chr11:65424695|65424919
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MHCRLLGEGNGGYTGSALLFLLRFFKLELYFVRFHNTFLAF
Nucleotide Sequence TTGCATTGCAGATTACTAGGAGAAGGGAATGGTGGGTACACCGGTAGTGCTCTTTTGTTCTTGCTTCGTTTTTTTAAACTTGAACTTTACTTCGTTAGATTTCATAATACTTTCTTGGCATTCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab