CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65500626|65500904
Strand +
CircType exon
Host Gene ENSG00000251562.6;
Algorism CIRI2;
Sequence ACCCGGAAATCGGCCTACGTCCCCATATAAATCCCTTTACACCTCAGTACGAAACTCCCCCATTATATTAGAAAATAAATAAAAGGTTACCATAAGTAAGTTCCAGAAAAACAACATATTGCCGACCTCACGGATTTTTACCAACCACTCGCTTTCCCTGTGGCCTTGGCACACTGGCATGCTGGTCTAGGATCCTCTACGCACAACGCCTGCTCGCCTCCTCCGTGTGGTTGCCAAGCCAAGCCGCCTGCTACCTTCATCACCAAATTGCACTCGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65500626|65500904 hsa-miR-182-5p 0 0 1
chr11:65500626|65500904 hsa-miR-182-3p 0 0 1
chr11:65500626|65500904 hsa-miR-210-5p 0 0 1
chr11:65500626|65500904 hsa-miR-210-3p 0 0 1
chr11:65500626|65500904 hsa-miR-130a-5p 0 0 1
chr11:65500626|65500904 hsa-miR-130a-3p 0 0 1
chr11:65500626|65500904 hsa-miR-301a-5p 0 0 1
chr11:65500626|65500904 hsa-miR-301a-3p 0 0 1
chr11:65500626|65500904 hsa-miR-130b-5p 0 0 1
chr11:65500626|65500904 hsa-miR-130b-3p 0 0 1
chr11:65500626|65500904 hsa-miR-493-5p 0 0 1
chr11:65500626|65500904 hsa-miR-493-3p 0 0 1
chr11:65500626|65500904 hsa-miR-584-5p 0 0 1
chr11:65500626|65500904 hsa-miR-584-3p 0 0 1
chr11:65500626|65500904 hsa-miR-625-5p 0 0 1
chr11:65500626|65500904 hsa-miR-625-3p 0 0 1
chr11:65500626|65500904 hsa-miR-634 0 0 1
chr11:65500626|65500904 hsa-miR-648 0 1 1
chr11:65500626|65500904 hsa-miR-454-5p 0 0 1
chr11:65500626|65500904 hsa-miR-454-3p 0 0 1
chr11:65500626|65500904 hsa-miR-765 1 1 1
chr11:65500626|65500904 hsa-miR-147b-5p 0 0 1
chr11:65500626|65500904 hsa-miR-147b-3p 0 0 1
chr11:65500626|65500904 hsa-miR-877-5p 0 0 1
chr11:65500626|65500904 hsa-miR-877-3p 0 0 1
chr11:65500626|65500904 hsa-miR-301b-5p 0 0 1
chr11:65500626|65500904 hsa-miR-301b-3p 0 0 1
chr11:65500626|65500904 hsa-miR-1180-5p 0 0 1
chr11:65500626|65500904 hsa-miR-1180-3p 0 0 1
chr11:65500626|65500904 hsa-miR-1227-5p 0 0 1
chr11:65500626|65500904 hsa-miR-1227-3p 0 0 1
chr11:65500626|65500904 hsa-miR-1294 1 1 1
chr11:65500626|65500904 hsa-miR-1299 0 1 1
chr11:65500626|65500904 hsa-miR-1275 1 0 1
chr11:65500626|65500904 hsa-miR-140-5p 0 0 1
chr11:65500626|65500904 hsa-miR-199a-5p 0 1 1
chr11:65500626|65500904 hsa-miR-875-3p 0 0 1
chr11:65500626|65500904 hsa-miR-576-5p 0 0 1
chr11:65500626|65500904 hsa-miR-199b-5p 0 0 1
chr11:65500626|65500904 hsa-miR-338-3p 0 1 1
chr11:65500626|65500904 hsa-miR-548c-3p 0 0 1
chr11:65500626|65500904 hsa-miR-220c 0 0 1
chr11:65500626|65500904 hsa-miR-516b 0 0 1
chr11:65500626|65500904 hsa-miR-1295 0 0 1
chr11:65500626|65500904 hsa-miR-1259 0 0 1
chr11:65500626|65500904 hsa-miR-325 1 0 0
chr11:65500626|65500904 hsa-miR-608 1 0 0
chr11:65500626|65500904 hsa-miR-637 1 0 0
chr11:65500626|65500904 hsa-miR-658 1 0 0
chr11:65500626|65500904 hsa-miR-1295a 0 1 0
chr11:65500626|65500904 hsa-miR-1268a 1 0 0
chr11:65500626|65500904 hsa-miR-2110 1 0 0
chr11:65500626|65500904 hsa-miR-3153 1 1 0
chr11:65500626|65500904 hsa-miR-3197 1 0 0
chr11:65500626|65500904 hsa-miR-4271 1 0 0
chr11:65500626|65500904 hsa-miR-3665 1 0 0
chr11:65500626|65500904 hsa-miR-3918 1 0 0
chr11:65500626|65500904 hsa-miR-3937 1 1 0
chr11:65500626|65500904 hsa-miR-1268b 1 0 0
chr11:65500626|65500904 hsa-miR-4462 1 0 0
chr11:65500626|65500904 hsa-miR-4488 1 0 0
chr11:65500626|65500904 hsa-miR-2392 1 0 0
chr11:65500626|65500904 hsa-miR-4510 1 0 0
chr11:65500626|65500904 hsa-miR-4525 1 0 0
chr11:65500626|65500904 hsa-miR-4656 1 0 0
chr11:65500626|65500904 hsa-miR-4706 1 0 0
chr11:65500626|65500904 hsa-miR-4739 1 0 0
chr11:65500626|65500904 hsa-miR-4767 1 0 0
chr11:65500626|65500904 hsa-miR-4785 1 0 0
chr11:65500626|65500904 hsa-miR-5192 1 0 0
chr11:65500626|65500904 hsa-miR-5698 1 1 0
chr11:65500626|65500904 hsa-miR-5704 0 1 0
chr11:65500626|65500904 hsa-miR-6088 1 0 0
chr11:65500626|65500904 hsa-miR-6090 1 0 0
chr11:65500626|65500904 hsa-miR-6125 1 0 0
chr11:65500626|65500904 hsa-miR-6127 1 0 0
chr11:65500626|65500904 hsa-miR-6129 1 0 0
chr11:65500626|65500904 hsa-miR-6134 1 0 0
chr11:65500626|65500904 hsa-miR-7704 1 0 0
chr11:65500626|65500904 hsa-miR-8072 1 0 0
chr11:65500626|65500904 hsa-miR-8085 1 0 0
chr11:65500626|65500904 hsa-miR-8089 1 0 0
chr11:65500626|65500904 hsa-miR-9986 0 1 0
chr11:65500626|65500904 hsa-miR-138-5p 1 0 0
chr11:65500626|65500904 hsa-miR-135a-3p 1 0 0
chr11:65500626|65500904 hsa-miR-128-1-5p 1 0 0
chr11:65500626|65500904 hsa-miR-504-3p 1 0 0
chr11:65500626|65500904 hsa-miR-7155-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6747-5p 1 0 0
chr11:65500626|65500904 hsa-miR-7106-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6825-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6894-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6857-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6089 1 0 0
chr11:65500626|65500904 hsa-miR-6757-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6880-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4695-5p 1 1 0
chr11:65500626|65500904 hsa-miR-6867-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4753-5p 0 1 0
chr11:65500626|65500904 hsa-miR-7160-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4655-5p 1 0 0
chr11:65500626|65500904 hsa-miR-8069 1 0 0
chr11:65500626|65500904 hsa-miR-7845-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6768-5p 0 1 0
chr11:65500626|65500904 hsa-miR-3180-3p 1 0 0
chr11:65500626|65500904 hsa-miR-6772-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6796-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6732-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6805-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6798-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6770-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6821-5p 1 0 0
chr11:65500626|65500904 hsa-miR-5006-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6786-5p 1 0 0
chr11:65500626|65500904 hsa-miR-1226-5p 1 0 0
chr11:65500626|65500904 hsa-miR-193b-5p 1 0 0
chr11:65500626|65500904 hsa-miR-1908-5p 1 0 0
chr11:65500626|65500904 hsa-let-7d-5p 1 1 0
chr11:65500626|65500904 hsa-miR-4690-5p 1 1 0
chr11:65500626|65500904 hsa-let-7b-5p 1 1 0
chr11:65500626|65500904 hsa-miR-4787-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6824-5p 1 1 0
chr11:65500626|65500904 hsa-miR-6789-5p 1 0 0
chr11:65500626|65500904 hsa-miR-7112-5p 1 0 0
chr11:65500626|65500904 hsa-miR-3922-5p 0 1 0
chr11:65500626|65500904 hsa-miR-3191-3p 1 1 0
chr11:65500626|65500904 hsa-let-7c-5p 1 1 0
chr11:65500626|65500904 hsa-miR-4661-3p 0 1 0
chr11:65500626|65500904 hsa-miR-2277-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4717-5p 0 1 0
chr11:65500626|65500904 hsa-miR-3186-3p 1 0 0
chr11:65500626|65500904 hsa-miR-4802-5p 1 0 0
chr11:65500626|65500904 hsa-miR-1233-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4763-3p 1 0 0
chr11:65500626|65500904 hsa-miR-6778-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6787-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6812-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6865-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6870-5p 1 0 0
chr11:65500626|65500904 hsa-miR-1343-5p 1 0 0
chr11:65500626|65500904 hsa-miR-3180 1 0 0
chr11:65500626|65500904 hsa-miR-6737-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6752-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6754-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6803-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6815-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6819-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6851-5p 1 0 0
chr11:65500626|65500904 hsa-miR-7110-5p 1 0 0
chr11:65500626|65500904 hsa-miR-11181-3p 1 1 0
chr11:65500626|65500904 hsa-miR-1249-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6722-3p 1 0 0
chr11:65500626|65500904 hsa-miR-6751-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6763-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6879-5p 1 0 0
chr11:65500626|65500904 hsa-miR-7111-5p 1 1 0
chr11:65500626|65500904 hsa-miR-4728-5p 1 0 0
chr11:65500626|65500904 hsa-miR-5196-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6780b-5p 1 0 0
chr11:65500626|65500904 hsa-miR-10526-3p 1 0 0
chr11:65500626|65500904 hsa-miR-1237-5p 1 0 0
chr11:65500626|65500904 hsa-miR-328-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4649-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4725-3p 1 0 0
chr11:65500626|65500904 hsa-miR-4726-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4749-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6729-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6738-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6777-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6794-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6795-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6858-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6883-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6889-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4723-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6831-5p 1 0 0
chr11:65500626|65500904 hsa-miR-939-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6731-5p 1 0 0
chr11:65500626|65500904 hsa-miR-4665-5p 1 0 0
chr11:65500626|65500904 hsa-miR-3173-3p 1 0 0
chr11:65500626|65500904 hsa-miR-3679-5p 1 0 0
chr11:65500626|65500904 hsa-miR-6837-5p 1 1 0
chr11:65500626|65500904 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:65500626|65500904
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MAHWHAGLGSSTHNACSPPPCGCQAKPPATFITKLHSL
Nucleotide Sequence TTGGCACACTGGCATGCTGGTCTAGGATCCTCTACGCACAACGCCTGCTCGCCTCCTCCGTGTGGTTGCCAAGCCAAGCCGCCTGCTACCTTCATCACCAAATTGCACTCGCTC
CircID chr11:65500626|65500904
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MACWSRILYAQRLLASSVWLPSQAACYLHHQIALA
Nucleotide Sequence CTGGCATGCTGGTCTAGGATCCTCTACGCACAACGCCTGCTCGCCTCCTCCGTGTGGTTGCCAAGCCAAGCCGCCTGCTACCTTCATCACCAAATTGCACTCGCT
CircID chr11:65500626|65500904
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MPVCQGHRESEWLVKIREVGNMLFFWNLLMVTFYLFSNIMGEFRTEV
Nucleotide Sequence ATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAATATAATGGGGGAGTTTCGTACTGAGGTGTAA
CircID chr11:65500626|65500904
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MVMKVAGGLAWQPHGGGEQALCVEDPRPACQCAKATGKASGW
Nucleotide Sequence TTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab