CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65537967|65538160
Strand +
CircType exon
Host Gene ENSG00000142186.15;
Algorism CIRI2;
Sequence AGGGTAGCGAAGGGGTCGCCCTTGTCGCTGGACTCTGGGCCACCCCAGTTATACTCGCTGGCCAGCCGTGTACCGTCAGGAGGTGGCTCCTGGGAGCTTGGCTCCTGCCAGCCCTGTTCCCAGGAGCCCTCAGCTTCCCAGCTGCTCCAGTCGGACTCTGGGGATTTGGAGGATTTGTGGTCGGAGTTGCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65537967|65538160 hsa-miR-545-5p 0 0 1
chr11:65537967|65538160 hsa-miR-545-3p 0 0 1
chr11:65537967|65538160 hsa-miR-602 0 0 1
chr11:65537967|65538160 hsa-miR-605-5p 0 0 1
chr11:65537967|65538160 hsa-miR-605-3p 0 0 1
chr11:65537967|65538160 hsa-miR-608 0 1 1
chr11:65537967|65538160 hsa-miR-646 0 0 1
chr11:65537967|65538160 hsa-miR-665 0 0 1
chr11:65537967|65538160 hsa-miR-663b 0 0 1
chr11:65537967|65538160 hsa-miR-1292-5p 0 0 1
chr11:65537967|65538160 hsa-miR-1292-3p 0 0 1
chr11:65537967|65538160 hsa-miR-1207-3p 0 0 1
chr11:65537967|65538160 hsa-miR-1207-5p 0 0 1
chr11:65537967|65538160 hsa-miR-342-5p 0 0 1
chr11:65537967|65538160 hsa-miR-582-3p 0 0 1
chr11:65537967|65538160 hsa-miR-762 0 1 0
chr11:65537967|65538160 hsa-miR-1273c 0 1 0
chr11:65537967|65538160 hsa-miR-4498 0 1 0
chr11:65537967|65538160 hsa-miR-4651 0 1 0
chr11:65537967|65538160 hsa-miR-4721 0 1 0
chr11:65537967|65538160 hsa-miR-6081 0 1 0
chr11:65537967|65538160 hsa-miR-7150 0 1 0
chr11:65537967|65538160 hsa-miR-8089 0 1 0
chr11:65537967|65538160 hsa-miR-150-3p 1 0 0
chr11:65537967|65538160 hsa-miR-7851-3p 0 1 0
chr11:65537967|65538160 hsa-miR-4722-5p 0 1 0
chr11:65537967|65538160 hsa-miR-505-5p 0 1 0
chr11:65537967|65538160 hsa-miR-23a-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6810-5p 0 1 0
chr11:65537967|65538160 hsa-miR-5088-5p 0 1 0
chr11:65537967|65538160 hsa-miR-1226-5p 0 1 0
chr11:65537967|65538160 hsa-miR-204-3p 0 1 0
chr11:65537967|65538160 hsa-miR-6823-5p 0 1 0
chr11:65537967|65538160 hsa-miR-4446-3p 0 1 0
chr11:65537967|65538160 hsa-miR-3190-5p 0 1 0
chr11:65537967|65538160 hsa-miR-660-3p 0 1 0
chr11:65537967|65538160 hsa-miR-5571-3p 0 1 0
chr11:65537967|65538160 hsa-miR-2355-5p 0 1 0
chr11:65537967|65538160 hsa-miR-3177-3p 1 0 0
chr11:65537967|65538160 hsa-miR-6846-3p 0 1 0
chr11:65537967|65538160 hsa-miR-5007-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6812-5p 0 1 0
chr11:65537967|65538160 hsa-miR-5001-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6726-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6737-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6819-5p 0 1 0
chr11:65537967|65538160 hsa-miR-3127-3p 0 1 0
chr11:65537967|65538160 hsa-miR-1909-3p 0 1 0
chr11:65537967|65538160 hsa-miR-4685-5p 0 1 0
chr11:65537967|65538160 hsa-miR-939-5p 0 1 0
chr11:65537967|65538160 hsa-miR-4646-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6756-3p 0 1 0
chr11:65537967|65538160 hsa-miR-6792-3p 0 1 0
chr11:65537967|65538160 hsa-miR-3928-5p 0 1 0
chr11:65537967|65538160 hsa-miR-4691-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6500-5p 0 1 0
chr11:65537967|65538160 hsa-miR-6764-5p 0 1 0
chr11:65537967|65538160 hsa-miR-664a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:65537967|65538160
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MSLDSGPPQLYSLASRVPSGGGSWELGSCQPCSQEPSASQLLQSDSGDLEDLWSELL
Nucleotide Sequence TTGTCGCTGGACTCTGGGCCACCCCAGTTATACTCGCTGGCCAGCCGTGTACCGTCAGGAGGTGGCTCCTGGGAGCTTGGCTCCTGCCAGCCCTGTTCCCAGGAGCCCTCAGCTTCCCAGCTGCTCCAGTCGGACTCTGGGGATTTGGAGGATTTGTGGTCGGAGTTGCTG

CircID chr11:65537967|65538160
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MGHPSYTRWPAVYRQEVAPGSLAPASPVPRSPQLPSCSSRTLGIWRICGRSC
Nucleotide Sequence CTGGGCCACCCCAGTTATACTCGCTGGCCAGCCGTGTACCGTCAGGAGGTGGCTCCTGGGAGCTTGGCTCCTGCCAGCCCTGTTCCCAGGAGCCCTCAGCTTCCCAGCTGCTCCAGTCGGACTCTGGGGATTTGGAGGATTTGTGGTCGGAGTTGCTGA

CircID chr11:65537967|65538160
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MGAWLLPALFPGALSFPAAPVGLWGFGGFVVGVAD
Nucleotide Sequence CTGGGAGCTTGGCTCCTGCCAGCCCTGTTCCCAGGAGCCCTCAGCTTCCCAGCTGCTCCAGTCGGACTCTGGGGATTTGGAGGATTTGTGGTCGGAGTTGCTGAC

CircID chr11:65537967|65538160
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MRAPGNRAGRSQAPRSHLLTVHGWPASITGVAQSPATRATPSLP
Nucleotide Sequence CTGAGGGCTCCTGGGAACAGGGCTGGCAGGAGCCAAGCTCCCAGGAGCCACCTCCTGACGGTACACGGCTGGCCAGCGAGTATAACTGGGGTGGCCCAGAGTCCAGCGACAAGGGCGACCCCTTCGCTACCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites