CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65582185|65582368
Strand +
CircType exon
Host Gene ENSG00000173442.10;
Algorism CIRI2;
Sequence CCCCAGCTTCTGCCTCCCAGCCTCCCAGACCCCTGGATATTGCCCCCTGGGCAGTTGATAACAGGGCCCCCTGCCAGCTGCTCACCTGGGGCCTGGTGCTTATTGCTCCAACAGAAGGGCCCTGCTCCAGGCCTGTCCCCTCAATACCAGGTGCTCCACCCCTCACTTCTGCACCCTCTCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65582185|65582368 hsa-miR-29a-5p 0 0 1
chr11:65582185|65582368 hsa-miR-29a-3p 0 0 1
chr11:65582185|65582368 hsa-miR-29c-5p 0 0 1
chr11:65582185|65582368 hsa-miR-29c-3p 0 0 1
chr11:65582185|65582368 hsa-miR-608 1 0 1
chr11:65582185|65582368 hsa-miR-646 0 0 1
chr11:65582185|65582368 hsa-miR-650 0 0 1
chr11:65582185|65582368 hsa-miR-298 0 1 1
chr11:65582185|65582368 hsa-miR-1237-5p 0 0 1
chr11:65582185|65582368 hsa-miR-1237-3p 0 0 1
chr11:65582185|65582368 hsa-miR-1291 0 0 1
chr11:65582185|65582368 hsa-miR-1267 0 0 1
chr11:65582185|65582368 hsa-miR-1827 0 0 1
chr11:65582185|65582368 hsa-miR-125a-3p 0 1 1
chr11:65582185|65582368 hsa-miR-485-5p 0 0 1
chr11:65582185|65582368 hsa-miR-146b-3p 0 0 1
chr11:65582185|65582368 hsa-miR-423-5p 0 0 1
chr11:65582185|65582368 hsa-miR-1207-3p 0 0 1
chr11:65582185|65582368 hsa-miR-1207-5p 1 0 1
chr11:65582185|65582368 hsa-miR-1274b 0 0 1
chr11:65582185|65582368 hsa-miR-1254 0 0 1
chr11:65582185|65582368 hsa-miR-29b 0 0 1
chr11:65582185|65582368 hsa-miR-601 1 0 0
chr11:65582185|65582368 hsa-miR-648 1 0 0
chr11:65582185|65582368 hsa-miR-663a 1 0 0
chr11:65582185|65582368 hsa-miR-762 1 0 0
chr11:65582185|65582368 hsa-miR-940 1 0 0
chr11:65582185|65582368 hsa-miR-2861 1 0 0
chr11:65582185|65582368 hsa-miR-3141 1 0 0
chr11:65582185|65582368 hsa-miR-3181 1 0 0
chr11:65582185|65582368 hsa-miR-3188 1 0 0
chr11:65582185|65582368 hsa-miR-320e 1 0 0
chr11:65582185|65582368 hsa-miR-4314 0 1 0
chr11:65582185|65582368 hsa-miR-3652 1 0 0
chr11:65582185|65582368 hsa-miR-3918 0 1 0
chr11:65582185|65582368 hsa-miR-4430 1 0 0
chr11:65582185|65582368 hsa-miR-4449 1 0 0
chr11:65582185|65582368 hsa-miR-4466 1 0 0
chr11:65582185|65582368 hsa-miR-3689c 0 1 0
chr11:65582185|65582368 hsa-miR-4492 1 0 0
chr11:65582185|65582368 hsa-miR-4498 1 0 0
chr11:65582185|65582368 hsa-miR-4505 1 0 0
chr11:65582185|65582368 hsa-miR-2392 1 0 0
chr11:65582185|65582368 hsa-miR-4512 1 0 0
chr11:65582185|65582368 hsa-miR-1587 1 0 0
chr11:65582185|65582368 hsa-miR-4651 1 0 0
chr11:65582185|65582368 hsa-miR-4656 1 0 0
chr11:65582185|65582368 hsa-miR-4721 1 0 0
chr11:65582185|65582368 hsa-miR-4739 1 1 0
chr11:65582185|65582368 hsa-miR-5090 1 0 0
chr11:65582185|65582368 hsa-miR-5194 0 1 0
chr11:65582185|65582368 hsa-miR-5787 1 1 0
chr11:65582185|65582368 hsa-miR-6081 1 1 0
chr11:65582185|65582368 hsa-miR-6085 1 0 0
chr11:65582185|65582368 hsa-miR-6086 1 1 0
chr11:65582185|65582368 hsa-miR-6127 1 0 0
chr11:65582185|65582368 hsa-miR-6133 1 0 0
chr11:65582185|65582368 hsa-miR-6165 1 0 0
chr11:65582185|65582368 hsa-miR-6745 1 0 0
chr11:65582185|65582368 hsa-miR-7150 0 1 0
chr11:65582185|65582368 hsa-miR-8085 1 0 0
chr11:65582185|65582368 hsa-miR-12115 1 0 0
chr11:65582185|65582368 hsa-miR-12119 1 0 0
chr11:65582185|65582368 hsa-miR-138-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4433b-3p 1 1 0
chr11:65582185|65582368 hsa-miR-92a-1-5p 1 0 0
chr11:65582185|65582368 hsa-miR-128-1-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6734-5p 0 1 0
chr11:65582185|65582368 hsa-miR-504-3p 1 0 0
chr11:65582185|65582368 hsa-miR-6747-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4726-3p 0 1 0
chr11:65582185|65582368 hsa-miR-4433a-3p 1 1 0
chr11:65582185|65582368 hsa-miR-7106-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6894-5p 1 0 0
chr11:65582185|65582368 hsa-miR-1972 1 0 0
chr11:65582185|65582368 hsa-miR-6799-5p 1 0 0
chr11:65582185|65582368 hsa-miR-8071 1 0 0
chr11:65582185|65582368 hsa-miR-6804-5p 1 1 0
chr11:65582185|65582368 hsa-miR-3663-3p 1 0 0
chr11:65582185|65582368 hsa-miR-6515-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6089 1 0 0
chr11:65582185|65582368 hsa-miR-3192-5p 1 1 0
chr11:65582185|65582368 hsa-miR-7847-3p 1 0 0
chr11:65582185|65582368 hsa-miR-874-5p 0 1 0
chr11:65582185|65582368 hsa-miR-6721-5p 1 1 0
chr11:65582185|65582368 hsa-miR-197-5p 1 0 0
chr11:65582185|65582368 hsa-miR-3151-5p 1 0 0
chr11:65582185|65582368 hsa-miR-3180-3p 1 0 0
chr11:65582185|65582368 hsa-miR-6772-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6796-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6732-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6805-5p 0 1 0
chr11:65582185|65582368 hsa-miR-6798-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6760-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6782-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6765-3p 1 0 0
chr11:65582185|65582368 hsa-miR-30b-3p 0 1 0
chr11:65582185|65582368 hsa-miR-6786-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6835-5p 1 0 0
chr11:65582185|65582368 hsa-miR-7109-5p 1 1 0
chr11:65582185|65582368 hsa-miR-1226-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6740-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4640-5p 1 0 0
chr11:65582185|65582368 hsa-miR-1908-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6771-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4732-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6749-5p 1 1 0
chr11:65582185|65582368 hsa-miR-4787-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4446-3p 1 0 0
chr11:65582185|65582368 hsa-miR-149-3p 1 0 0
chr11:65582185|65582368 hsa-miR-3065-3p 0 1 0
chr11:65582185|65582368 hsa-miR-7160-3p 1 1 0
chr11:65582185|65582368 hsa-miR-6869-5p 0 1 0
chr11:65582185|65582368 hsa-miR-744-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4774-5p 0 1 0
chr11:65582185|65582368 hsa-miR-1296-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6851-3p 1 0 0
chr11:65582185|65582368 hsa-miR-1911-5p 1 0 0
chr11:65582185|65582368 hsa-miR-1233-5p 1 0 0
chr11:65582185|65582368 hsa-miR-1273h-5p 0 1 0
chr11:65582185|65582368 hsa-miR-3689b-3p 0 1 0
chr11:65582185|65582368 hsa-miR-4763-3p 1 1 0
chr11:65582185|65582368 hsa-miR-6769b-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6778-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6816-5p 1 0 0
chr11:65582185|65582368 hsa-miR-3180 1 0 0
chr11:65582185|65582368 hsa-miR-5001-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6737-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6752-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6754-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6756-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6803-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6819-5p 1 0 0
chr11:65582185|65582368 hsa-miR-7110-5p 1 0 0
chr11:65582185|65582368 hsa-miR-10401-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6722-3p 1 1 0
chr11:65582185|65582368 hsa-miR-6751-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6779-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6780a-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6808-5p 1 0 0
chr11:65582185|65582368 hsa-miR-7111-5p 1 0 0
chr11:65582185|65582368 hsa-miR-3127-3p 1 0 0
chr11:65582185|65582368 hsa-miR-3620-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4728-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6836-5p 1 1 0
chr11:65582185|65582368 hsa-miR-10396a-5p 1 0 0
chr11:65582185|65582368 hsa-miR-10396b-5p 1 0 0
chr11:65582185|65582368 hsa-miR-10526-3p 1 0 0
chr11:65582185|65582368 hsa-miR-1909-3p 1 1 0
chr11:65582185|65582368 hsa-miR-328-5p 1 1 0
chr11:65582185|65582368 hsa-miR-3689a-3p 0 1 0
chr11:65582185|65582368 hsa-miR-4685-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4745-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4749-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6738-5p 1 1 0
chr11:65582185|65582368 hsa-miR-675-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6795-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6846-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6848-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6883-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6887-5p 1 1 0
chr11:65582185|65582368 hsa-miR-4697-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4723-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6831-5p 1 0 0
chr11:65582185|65582368 hsa-miR-939-5p 1 0 0
chr11:65582185|65582368 hsa-miR-1910-3p 0 1 0
chr11:65582185|65582368 hsa-miR-6511a-5p 0 1 0
chr11:65582185|65582368 hsa-miR-3198 1 0 0
chr11:65582185|65582368 hsa-miR-6731-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6758-5p 1 1 0
chr11:65582185|65582368 hsa-miR-6856-5p 1 1 0
chr11:65582185|65582368 hsa-miR-1914-3p 1 1 0
chr11:65582185|65582368 hsa-miR-6855-5p 1 0 0
chr11:65582185|65582368 hsa-miR-4646-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6891-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6766-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6785-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6791-5p 1 0 0
chr11:65582185|65582368 hsa-miR-342-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6762-5p 1 0 0
chr11:65582185|65582368 hsa-miR-6775-3p 1 1 0
chr11:65582185|65582368 hsa-miR-6884-5p 1 1 0
chr11:65582185|65582368 hsa-miR-363-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:65582185|65582368
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MPPSLPDPWILPPGQLITGPPASCSPGAWCLLLQQKGPAPGLSPQYQVLHPSLLHPLS
Nucleotide Sequence CTGCCTCCCAGCCTCCCAGACCCCTGGATATTGCCCCCTGGGCAGTTGATAACAGGGCCCCCTGCCAGCTGCTCACCTGGGGCCTGGTGCTTATTGCTCCAACAGAAGGGCCCTGCTCCAGGCCTGTCCCCTCAATACCAGGTGCTCCACCCCTCACTTCTGCACCCTCTCTCT
CircID chr11:65582185|65582368
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MPAAHLGPGAYCSNRRALLQACPLNTRCSTPHFCTLSL
Nucleotide Sequence CTGCCAGCTGCTCACCTGGGGCCTGGTGCTTATTGCTCCAACAGAAGGGCCCTGCTCCAGGCCTGTCCCCTCAATACCAGGTGCTCCACCCCTCACTTCTGCACCCTCTCTCTC
CircID chr11:65582185|65582368
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MDIAPWAVDNRAPCQLLTWGLVLIAPTEGPCSRPVPSIPGAPPLTSAPSL
Nucleotide Sequence CTGGATATTGCCCCCTGGGCAGTTGATAACAGGGCCCCCTGCCAGCTGCTCACCTGGGGCCTGGTGCTTATTGCTCCAACAGAAGGGCCCTGCTCCAGGCCTGTCCCCTCAATACCAGGTGCTCCACCCCTCACTTCTGCACCCTCTCTC
CircID chr11:65582185|65582368
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MEQGPSVGAISTRPQVSSWQGALLSTAQGAISRGLGGWEAEAG
Nucleotide Sequence CTGGAGCAGGGCCCTTCTGTTGGAGCAATAAGCACCAGGCCCCAGGTGAGCAGCTGGCAGGGGGCCCTGTTATCAACTGCCCAGGGGGCAATATCCAGGGGTCTGGGAGGCTGGGAGGCAGAAGCTGGG
CircID chr11:65582185|65582368
ORF Type ORF5
Protein Length 25
Nucleotide Length 75
Protein Sequence MAGGPVINCPGGNIQGSGRLGGRSW
Nucleotide Sequence CTGGCAGGGGGCCCTGTTATCAACTGCCCAGGGGGCAATATCCAGGGGTCTGGGAGGCTGGGAGGCAGAAGCTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab