CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65597958|65598144
Strand +
CircType exon
Host Gene ENSG00000173327.6;
Algorism CIRI2;
Sequence AGGAAGCCTTCACACTGGAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTAGGTCCCCCCAGCTCACCTGCCCTACTGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGTGCAGGGAAGAGGGGCCGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65597958|65598144 hsa-miR-214-5p 0 0 1
chr11:65597958|65598144 hsa-miR-214-3p 0 0 1
chr11:65597958|65598144 hsa-miR-150-5p 0 0 1
chr11:65597958|65598144 hsa-miR-150-3p 0 0 1
chr11:65597958|65598144 hsa-miR-484 0 1 1
chr11:65597958|65598144 hsa-miR-552-5p 0 0 1
chr11:65597958|65598144 hsa-miR-552-3p 0 0 1
chr11:65597958|65598144 hsa-miR-558 0 0 1
chr11:65597958|65598144 hsa-miR-637 0 1 1
chr11:65597958|65598144 hsa-miR-760 0 1 1
chr11:65597958|65598144 hsa-miR-1236-5p 0 0 1
chr11:65597958|65598144 hsa-miR-1236-3p 0 0 1
chr11:65597958|65598144 hsa-miR-1825 0 0 1
chr11:65597958|65598144 hsa-miR-125a-3p 0 1 1
chr11:65597958|65598144 hsa-miR-145-5p 0 0 1
chr11:65597958|65598144 hsa-miR-296-5p 0 0 1
chr11:65597958|65598144 hsa-miR-491-5p 0 0 1
chr11:65597958|65598144 hsa-miR-299-3p 0 0 1
chr11:65597958|65598144 hsa-miR-199a-5p 0 1 1
chr11:65597958|65598144 hsa-miR-1225-5p 1 1 1
chr11:65597958|65598144 hsa-miR-1207-3p 0 0 1
chr11:65597958|65598144 hsa-miR-576-3p 0 0 1
chr11:65597958|65598144 hsa-miR-199b-5p 0 0 1
chr11:65597958|65598144 hsa-miR-125a-5p 1 1 1
chr11:65597958|65598144 hsa-miR-516a-3p 0 0 1
chr11:65597958|65598144 hsa-miR-1274a 0 0 1
chr11:65597958|65598144 hsa-miR-125b 0 0 1
chr11:65597958|65598144 hsa-miR-133b 1 1 0
chr11:65597958|65598144 hsa-miR-657 1 0 0
chr11:65597958|65598144 hsa-miR-762 1 0 0
chr11:65597958|65598144 hsa-miR-1470 1 0 0
chr11:65597958|65598144 hsa-miR-1913 1 0 0
chr11:65597958|65598144 hsa-miR-3147 1 1 0
chr11:65597958|65598144 hsa-miR-3181 1 0 0
chr11:65597958|65598144 hsa-miR-4259 0 1 0
chr11:65597958|65598144 hsa-miR-3665 0 1 0
chr11:65597958|65598144 hsa-miR-4736 0 1 0
chr11:65597958|65598144 hsa-miR-5193 1 1 0
chr11:65597958|65598144 hsa-miR-8089 1 0 0
chr11:65597958|65598144 hsa-miR-6749-3p 0 1 0
chr11:65597958|65598144 hsa-miR-4731-5p 0 1 0
chr11:65597958|65598144 hsa-miR-6747-3p 1 0 0
chr11:65597958|65598144 hsa-miR-4665-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6861-5p 1 1 0
chr11:65597958|65598144 hsa-miR-6892-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6881-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6806-5p 1 0 0
chr11:65597958|65598144 hsa-miR-197-5p 1 0 0
chr11:65597958|65598144 hsa-miR-3189-5p 1 0 0
chr11:65597958|65598144 hsa-miR-5589-5p 0 1 0
chr11:65597958|65598144 hsa-miR-6776-5p 1 1 0
chr11:65597958|65598144 hsa-miR-7110-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6841-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6845-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6796-5p 0 1 0
chr11:65597958|65598144 hsa-miR-877-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6728-3p 1 0 0
chr11:65597958|65598144 hsa-miR-345-3p 1 0 0
chr11:65597958|65598144 hsa-miR-939-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6763-3p 1 0 0
chr11:65597958|65598144 hsa-miR-1229-5p 1 0 0
chr11:65597958|65598144 hsa-miR-7113-3p 1 1 0
chr11:65597958|65598144 hsa-miR-7111-3p 1 1 0
chr11:65597958|65598144 hsa-miR-4667-3p 1 1 0
chr11:65597958|65598144 hsa-miR-4446-5p 0 1 0
chr11:65597958|65598144 hsa-miR-1306-5p 0 1 0
chr11:65597958|65598144 hsa-miR-6769a-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6870-3p 1 0 0
chr11:65597958|65598144 hsa-miR-4707-5p 1 0 0
chr11:65597958|65598144 hsa-miR-6743-3p 1 0 0
chr11:65597958|65598144 hsa-miR-7106-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6887-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6826-3p 0 1 0
chr11:65597958|65598144 hsa-miR-6886-3p 1 0 0
chr11:65597958|65598144 hsa-miR-5088-3p 1 1 0
chr11:65597958|65598144 hsa-miR-4749-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6795-3p 1 0 0
chr11:65597958|65598144 hsa-miR-4746-5p 1 0 0
chr11:65597958|65598144 hsa-miR-4524a-3p 0 1 0
chr11:65597958|65598144 hsa-miR-6802-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6851-3p 1 0 0
chr11:65597958|65598144 hsa-miR-3620-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6734-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6812-3p 1 0 0
chr11:65597958|65598144 hsa-miR-1249-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6800-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6731-3p 1 0 0
chr11:65597958|65598144 hsa-miR-4524b-3p 0 1 0
chr11:65597958|65598144 hsa-miR-133a-3p 1 1 0
chr11:65597958|65598144 hsa-miR-1207-5p 1 0 0
chr11:65597958|65598144 hsa-miR-6726-5p 1 0 0
chr11:65597958|65598144 hsa-miR-6803-5p 1 0 0
chr11:65597958|65598144 hsa-miR-6879-5p 0 1 0
chr11:65597958|65598144 hsa-miR-3127-3p 0 1 0
chr11:65597958|65598144 hsa-miR-4685-3p 1 1 0
chr11:65597958|65598144 hsa-miR-328-5p 1 0 0
chr11:65597958|65598144 hsa-miR-4632-5p 0 1 0
chr11:65597958|65598144 hsa-miR-6794-5p 1 0 0
chr11:65597958|65598144 hsa-miR-6795-5p 1 0 0
chr11:65597958|65598144 hsa-miR-6887-5p 0 1 0
chr11:65597958|65598144 hsa-miR-4436b-3p 0 1 0
chr11:65597958|65598144 hsa-miR-4697-5p 0 1 0
chr11:65597958|65598144 hsa-miR-7843-5p 0 1 0
chr11:65597958|65598144 hsa-miR-6791-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6724-5p 1 1 0
chr11:65597958|65598144 hsa-miR-2682-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6791-5p 1 0 0
chr11:65597958|65598144 hsa-miR-6756-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6805-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6810-3p 1 0 0
chr11:65597958|65598144 hsa-miR-6829-3p 1 0 0
chr11:65597958|65598144 hsa-miR-10400-3p 1 0 0
chr11:65597958|65598144 hsa-miR-10392-3p 1 1 0
chr11:65597958|65598144 hsa-miR-3059-5p 1 0 0
chr11:65597958|65598144 hsa-miR-4723-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6744-3p 1 0 0
chr11:65597958|65598144 hsa-miR-3619-5p 0 1 0
chr11:65597958|65598144 hsa-miR-6824-3p 1 1 0
chr11:65597958|65598144 hsa-miR-6764-3p 0 1 0
chr11:65597958|65598144 hsa-miR-125b-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:65597958|65598144
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MPYWGPTLYPAGWEDQSLSQGIACWGDAGRRGGAGKRGR
Nucleotide Sequence CTGCCCTACTGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGTGCAGGGAAGAGGGGCCGG
CircID chr11:65597958|65598144
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MVGRTRACLRELPAGVMQGGGEVQGRGAG
Nucleotide Sequence CTGGTTGGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGTGCAGGGAAGAGGGGCCGGC
CircID chr11:65597958|65598144
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MEGGPAPPHLKPVGPPSSPALLGPNTVPSWLGGPEPVSGNCLLG
Nucleotide Sequence CTGGAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTAGGTCCCCCCAGCTCACCTGCCCTACTGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGA
CircID chr11:65597958|65598144
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MHLPSSLHHPSRQFPETGSGPPNQLGTVLGPSRAGELGGPTGFRCGGAGPPSSVKAS
Nucleotide Sequence CTGCACCTCCCCTCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCAACCAGCTGGGTACAGTGTTGGGCCCCAGTAGGGCAGGTGAGCTGGGGGGACCTACAGGTTTCAGATGTGGGGGCGCAGGTCCCCCTTCCAGTGTGAAGGCTTCC
CircID chr11:65597958|65598144
ORF Type ORF5
Protein Length 39
Nucleotide Length 120
Protein Sequence MRQALVLPTSWVQCWAPVGQVSWGDLQVSDVGAQVPLPV
Nucleotide Sequence CTGAGACAGGCTCTGGTCCTCCCAACCAGCTGGGTACAGTGTTGGGCCCCAGTAGGGCAGGTGAGCTGGGGGGACCTACAGGTTTCAGATGTGGGGGCGCAGGTCCCCCTTCCAGTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab