CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65649546|65649841
Strand -
CircType exon
Host Gene ENSG00000213445.7;
Algorism CIRI2;
Sequence CCCTGCTCTCCCCAGCTCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAGTGCTGACAGTGAGACACCCCTGACCCAGGTGAGCAGAAACCAGGCTCTGGAGCCCAACAGCACAGTGGTGACAGTGGGCATCACTGAATCTGTATCCACTTCTGTGGCACAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCACGTACCTTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65649546|65649841 hsa-miR-197-5p 0 0 1
chr11:65649546|65649841 hsa-miR-197-3p 0 0 1
chr11:65649546|65649841 hsa-miR-135b-5p 0 0 1
chr11:65649546|65649841 hsa-miR-135b-3p 0 0 1
chr11:65649546|65649841 hsa-miR-608 1 1 1
chr11:65649546|65649841 hsa-miR-624-5p 0 0 1
chr11:65649546|65649841 hsa-miR-624-3p 0 0 1
chr11:65649546|65649841 hsa-miR-647 0 0 1
chr11:65649546|65649841 hsa-miR-661 1 0 1
chr11:65649546|65649841 hsa-miR-765 0 0 1
chr11:65649546|65649841 hsa-miR-874-5p 0 0 1
chr11:65649546|65649841 hsa-miR-874-3p 0 0 1
chr11:65649546|65649841 hsa-miR-665 0 1 1
chr11:65649546|65649841 hsa-miR-938 0 0 1
chr11:65649546|65649841 hsa-miR-939-5p 0 0 1
chr11:65649546|65649841 hsa-miR-939-3p 0 0 1
chr11:65649546|65649841 hsa-miR-1178-5p 0 0 1
chr11:65649546|65649841 hsa-miR-1178-3p 0 0 1
chr11:65649546|65649841 hsa-miR-1227-5p 0 0 1
chr11:65649546|65649841 hsa-miR-1227-3p 0 0 1
chr11:65649546|65649841 hsa-miR-1208 0 0 1
chr11:65649546|65649841 hsa-miR-1286 0 0 1
chr11:65649546|65649841 hsa-miR-1293 0 0 1
chr11:65649546|65649841 hsa-miR-1288-5p 0 0 1
chr11:65649546|65649841 hsa-miR-1288-3p 0 0 1
chr11:65649546|65649841 hsa-miR-1225-5p 1 1 1
chr11:65649546|65649841 hsa-miR-525-5p 0 0 1
chr11:65649546|65649841 hsa-miR-767-3p 0 0 1
chr11:65649546|65649841 hsa-miR-520a-5p 0 0 1
chr11:65649546|65649841 hsa-miR-220b 0 0 1
chr11:65649546|65649841 hsa-miR-135a 0 0 1
chr11:65649546|65649841 hsa-miR-544 0 0 1
chr11:65649546|65649841 hsa-miR-1254 0 0 1
chr11:65649546|65649841 hsa-miR-184 1 0 0
chr11:65649546|65649841 hsa-miR-612 1 0 0
chr11:65649546|65649841 hsa-miR-762 1 1 0
chr11:65649546|65649841 hsa-miR-920 0 1 0
chr11:65649546|65649841 hsa-miR-3147 1 1 0
chr11:65649546|65649841 hsa-miR-4259 1 0 0
chr11:65649546|65649841 hsa-miR-4270 1 0 0
chr11:65649546|65649841 hsa-miR-1268b 1 0 0
chr11:65649546|65649841 hsa-miR-4466 1 0 0
chr11:65649546|65649841 hsa-miR-4487 0 1 0
chr11:65649546|65649841 hsa-miR-4507 1 0 0
chr11:65649546|65649841 hsa-miR-4515 0 1 0
chr11:65649546|65649841 hsa-miR-4516 1 0 0
chr11:65649546|65649841 hsa-miR-4526 1 1 0
chr11:65649546|65649841 hsa-miR-4533 1 0 0
chr11:65649546|65649841 hsa-miR-1587 1 0 0
chr11:65649546|65649841 hsa-miR-4651 1 1 0
chr11:65649546|65649841 hsa-miR-4674 0 1 0
chr11:65649546|65649841 hsa-miR-4706 1 0 0
chr11:65649546|65649841 hsa-miR-4739 1 0 0
chr11:65649546|65649841 hsa-miR-5739 1 0 0
chr11:65649546|65649841 hsa-miR-5787 1 0 0
chr11:65649546|65649841 hsa-miR-6070 1 0 0
chr11:65649546|65649841 hsa-miR-6132 1 1 0
chr11:65649546|65649841 hsa-miR-6745 1 0 0
chr11:65649546|65649841 hsa-miR-6860 1 1 0
chr11:65649546|65649841 hsa-miR-7974 0 1 0
chr11:65649546|65649841 hsa-miR-8089 0 1 0
chr11:65649546|65649841 hsa-miR-9718 1 0 0
chr11:65649546|65649841 hsa-miR-12117 0 1 0
chr11:65649546|65649841 hsa-miR-4433b-3p 1 0 0
chr11:65649546|65649841 hsa-miR-4700-3p 0 1 0
chr11:65649546|65649841 hsa-miR-7155-5p 1 0 0
chr11:65649546|65649841 hsa-miR-323a-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6747-5p 1 0 0
chr11:65649546|65649841 hsa-miR-4433a-3p 1 0 0
chr11:65649546|65649841 hsa-miR-6861-5p 1 1 0
chr11:65649546|65649841 hsa-miR-6825-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6894-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6799-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6728-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6089 1 1 0
chr11:65649546|65649841 hsa-miR-4695-5p 1 0 0
chr11:65649546|65649841 hsa-miR-4722-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6820-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6741-5p 1 1 0
chr11:65649546|65649841 hsa-miR-200b-5p 1 0 0
chr11:65649546|65649841 hsa-miR-8069 1 0 0
chr11:65649546|65649841 hsa-miR-5589-5p 1 1 0
chr11:65649546|65649841 hsa-miR-6787-3p 0 1 0
chr11:65649546|65649841 hsa-miR-6742-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6793-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6796-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6732-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6798-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6782-5p 1 0 0
chr11:65649546|65649841 hsa-miR-5008-5p 0 1 0
chr11:65649546|65649841 hsa-miR-1229-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6784-5p 1 0 0
chr11:65649546|65649841 hsa-miR-4640-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6749-5p 1 0 0
chr11:65649546|65649841 hsa-miR-4787-5p 1 0 0
chr11:65649546|65649841 hsa-miR-1266-3p 0 1 0
chr11:65649546|65649841 hsa-miR-149-3p 1 0 0
chr11:65649546|65649841 hsa-miR-1304-3p 0 1 0
chr11:65649546|65649841 hsa-miR-3189-3p 1 0 0
chr11:65649546|65649841 hsa-miR-3681-5p 0 1 0
chr11:65649546|65649841 hsa-miR-4638-5p 0 1 0
chr11:65649546|65649841 hsa-miR-6828-3p 0 1 0
chr11:65649546|65649841 hsa-miR-1910-5p 1 0 0
chr11:65649546|65649841 hsa-miR-2355-3p 0 1 0
chr11:65649546|65649841 hsa-miR-503-3p 1 0 0
chr11:65649546|65649841 hsa-miR-1914-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6773-3p 0 1 0
chr11:65649546|65649841 hsa-miR-6748-3p 0 1 0
chr11:65649546|65649841 hsa-miR-5002-3p 0 1 0
chr11:65649546|65649841 hsa-miR-1207-5p 1 0 0
chr11:65649546|65649841 hsa-miR-1233-5p 1 0 0
chr11:65649546|65649841 hsa-miR-4763-3p 1 0 0
chr11:65649546|65649841 hsa-miR-6812-5p 1 1 0
chr11:65649546|65649841 hsa-miR-6816-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6865-5p 0 1 0
chr11:65649546|65649841 hsa-miR-6870-5p 1 0 0
chr11:65649546|65649841 hsa-miR-5001-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6726-5p 0 1 0
chr11:65649546|65649841 hsa-miR-6737-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6743-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6752-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6754-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6756-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6769a-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6803-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6819-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6842-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6851-5p 1 0 0
chr11:65649546|65649841 hsa-miR-7110-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6751-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6763-5p 0 1 0
chr11:65649546|65649841 hsa-miR-6774-5p 1 1 0
chr11:65649546|65649841 hsa-miR-6779-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6879-5p 1 0 0
chr11:65649546|65649841 hsa-miR-7111-5p 1 0 0
chr11:65649546|65649841 hsa-miR-3620-5p 1 0 0
chr11:65649546|65649841 hsa-miR-4685-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6794-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6848-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6858-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6845-5p 1 0 0
chr11:65649546|65649841 hsa-miR-3199 0 1 0
chr11:65649546|65649841 hsa-miR-3940-5p 1 0 0
chr11:65649546|65649841 hsa-miR-6731-5p 1 1 0
chr11:65649546|65649841 hsa-miR-4664-5p 1 0 0
chr11:65649546|65649841 hsa-miR-4700-5p 0 1 0
chr11:65649546|65649841 hsa-miR-4667-5p 0 1 0
chr11:65649546|65649841 hsa-miR-6849-5p 0 1 0
chr11:65649546|65649841 hsa-miR-10400-3p 0 1 0
chr11:65649546|65649841 hsa-miR-4756-5p 1 1 0
chr11:65649546|65649841 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:65649546|65649841
ORF Type ORF1
Protein Length 92
Nucleotide Length 276
Protein Sequence MSDEAPVLPNTTPDLLLATTAKPSVPSADSETPLTQVSRNQALEPNSTVVTVGITESVSTSVAQDRPGSPSGSEDKGNPAPELRASFLPRTL
Nucleotide Sequence CTGTCGGATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAGTGCTGACAGTGAGACACCCCTGACCCAGGTGAGCAGAAACCAGGCTCTGGAGCCCAACAGCACAGTGGTGACAGTGGGCATCACTGAATCTGTATCCACTTCTGTGGCACAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCACGTACCTTG
CircID chr11:65649546|65649841
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence LLSPALCRMRPQSCPTPPRTSSWPPQPSHQYPVLTVRHP
Nucleotide Sequence CTGCTCTCCCCAGCTCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAGTGCTGACAGTGAGACACCCCTGA
CircID chr11:65649546|65649841
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MNLYPLLWHRTGQAVPVALRTRATRRRS
Nucleotide Sequence CTGAATCTGTATCCACTTCTGTGGCACAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGA
CircID chr11:65649546|65649841
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MSPLCCWAPEPGFCSPGSGVSHCQHWVLMAWLWWPGGGPGWCWAGLGPHPTESWGEQ
Nucleotide Sequence CTGTCACCACTGTGCTGTTGGGCTCCAGAGCCTGGTTTCTGCTCACCTGGGTCAGGGGTGTCTCACTGTCAGCACTGGGTACTGATGGCTTGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTGGTGTTGGGCAGGACTGGGGCCTCATCCGACAGAGAGCTGGGGAGAGCAG
CircID chr11:65649546|65649841
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MCHRSGYRFSDAHCHHCAVGLQSLVSAHLGQGCLTVSTGY
Nucleotide Sequence CTGTGCCACAGAAGTGGATACAGATTCAGTGATGCCCACTGTCACCACTGTGCTGTTGGGCTCCAGAGCCTGGTTTCTGCTCACCTGGGTCAGGGGTGTCTCACTGTCAGCACTGGGTACTGA
CircID chr11:65649546|65649841
ORF Type ORF6
Protein Length 84
Nucleotide Length 252
Protein Sequence MPLSSEPLGLPGLSCATEVDTDSVMPTVTTVLLGSRAWFLLTWVRGVSLSALGTDGLAVVARRRSGVVLGRTGASSDRELGRAG
Nucleotide Sequence TTGCCCTTGTCCTCAGAGCCACTGGGACTGCCTGGCCTGTCCTGTGCCACAGAAGTGGATACAGATTCAGTGATGCCCACTGTCACCACTGTGCTGTTGGGCTCCAGAGCCTGGTTTCTGCTCACCTGGGTCAGGGGTGTCTCACTGTCAGCACTGGGTACTGATGGCTTGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTGGTGTTGGGCAGGACTGGGGCCTCATCCGACAGAGAGCTGGGGAGAGCAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab