CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65650157|65650601
Strand +
CircType exon
Host Gene ENSG00000213445.7;
Algorism CIRI2;
Sequence CTCCTCCTCCAGGGCCGCCCTGTCCGCCTTCTCCTTCTGCAGGTCCTCCTGCAGCTTCCTGAGCATGGACTCCAAGTGAGAGACCTTCTCTGAGAGGTTCCCAGGCTCTGGCCTGAAGACATGGGGGTCAAGACTCAGCAGGACCAAGGCAGGGGGCAGTGCACCAGCTGACTCCCAGCCCCAGCTAATGAGAGGGGCCCCGCTGGTCTTCTAGGCATATGTGGCAGCAGAGCCCAGGACAGAGCTCCACCCCAGCAGACAGGCACGAAGGGGGGGTCATGTGGGCAGGTAAAGCGGCTGTGGGGAGTTGGGGAGCTTACTCAGCATCAGATTTTGGAGTTCCCTTAGGGTCTCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65650157|65650601 hsa-miR-370-5p 0 0 1
chr11:65650157|65650601 hsa-miR-370-3p 0 0 1
chr11:65650157|65650601 hsa-miR-133b 0 0 1
chr11:65650157|65650601 hsa-miR-346 0 0 1
chr11:65650157|65650601 hsa-miR-492 0 0 1
chr11:65650157|65650601 hsa-miR-493-5p 0 0 1
chr11:65650157|65650601 hsa-miR-493-3p 0 0 1
chr11:65650157|65650601 hsa-miR-432-5p 0 0 1
chr11:65650157|65650601 hsa-miR-432-3p 0 0 1
chr11:65650157|65650601 hsa-miR-517-5p 0 0 1
chr11:65650157|65650601 hsa-miR-517a-3p 0 0 1
chr11:65650157|65650601 hsa-miR-517c-3p 0 0 1
chr11:65650157|65650601 hsa-miR-608 1 0 1
chr11:65650157|65650601 hsa-miR-627-5p 0 0 1
chr11:65650157|65650601 hsa-miR-627-3p 0 0 1
chr11:65650157|65650601 hsa-miR-632 0 0 1
chr11:65650157|65650601 hsa-miR-661 1 0 1
chr11:65650157|65650601 hsa-miR-765 0 0 1
chr11:65650157|65650601 hsa-miR-298 1 0 1
chr11:65650157|65650601 hsa-miR-890 0 0 1
chr11:65650157|65650601 hsa-miR-744-5p 0 0 1
chr11:65650157|65650601 hsa-miR-744-3p 0 0 1
chr11:65650157|65650601 hsa-miR-873-5p 0 0 1
chr11:65650157|65650601 hsa-miR-873-3p 0 0 1
chr11:65650157|65650601 hsa-miR-760 1 0 1
chr11:65650157|65650601 hsa-miR-924 0 0 1
chr11:65650157|65650601 hsa-miR-1205 0 0 1
chr11:65650157|65650601 hsa-miR-1286 0 0 1
chr11:65650157|65650601 hsa-miR-1291 0 0 1
chr11:65650157|65650601 hsa-miR-1292-5p 0 0 1
chr11:65650157|65650601 hsa-miR-1292-3p 0 0 1
chr11:65650157|65650601 hsa-miR-296-5p 1 0 1
chr11:65650157|65650601 hsa-miR-1289 0 0 1
chr11:65650157|65650601 hsa-miR-532-5p 0 0 1
chr11:65650157|65650601 hsa-miR-1207-3p 0 0 1
chr11:65650157|65650601 hsa-miR-324-3p 1 0 1
chr11:65650157|65650601 hsa-miR-342-5p 0 0 1
chr11:65650157|65650601 hsa-miR-550 0 0 1
chr11:65650157|65650601 hsa-miR-138 0 0 1
chr11:65650157|65650601 hsa-miR-133a 0 0 1
chr11:65650157|65650601 hsa-miR-596 1 0 0
chr11:65650157|65650601 hsa-miR-622 1 0 0
chr11:65650157|65650601 hsa-miR-637 1 0 0
chr11:65650157|65650601 hsa-miR-663a 1 0 0
chr11:65650157|65650601 hsa-miR-1913 1 0 0
chr11:65650157|65650601 hsa-miR-2861 1 0 0
chr11:65650157|65650601 hsa-miR-3138 1 0 0
chr11:65650157|65650601 hsa-miR-3141 1 0 0
chr11:65650157|65650601 hsa-miR-3185 1 0 0
chr11:65650157|65650601 hsa-miR-4312 1 0 0
chr11:65650157|65650601 hsa-miR-3918 1 0 0
chr11:65650157|65650601 hsa-miR-4421 1 0 0
chr11:65650157|65650601 hsa-miR-4449 1 0 0
chr11:65650157|65650601 hsa-miR-4516 1 0 0
chr11:65650157|65650601 hsa-miR-4651 1 0 0
chr11:65650157|65650601 hsa-miR-4675 1 0 0
chr11:65650157|65650601 hsa-miR-4689 1 0 0
chr11:65650157|65650601 hsa-miR-4706 1 0 0
chr11:65650157|65650601 hsa-miR-4734 1 0 0
chr11:65650157|65650601 hsa-miR-4739 1 0 0
chr11:65650157|65650601 hsa-miR-6125 1 0 0
chr11:65650157|65650601 hsa-miR-6127 1 0 0
chr11:65650157|65650601 hsa-miR-6133 1 0 0
chr11:65650157|65650601 hsa-miR-8077 1 0 0
chr11:65650157|65650601 hsa-miR-18a-3p 1 0 0
chr11:65650157|65650601 hsa-miR-93-3p 1 0 0
chr11:65650157|65650601 hsa-miR-3194-3p 1 0 0
chr11:65650157|65650601 hsa-miR-4665-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6765-5p 1 0 0
chr11:65650157|65650601 hsa-miR-671-5p 1 0 0
chr11:65650157|65650601 hsa-miR-27a-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6089 1 0 0
chr11:65650157|65650601 hsa-miR-1225-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6880-5p 1 0 0
chr11:65650157|65650601 hsa-miR-4695-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6746-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6727-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6721-5p 1 0 0
chr11:65650157|65650601 hsa-miR-4728-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6787-3p 1 0 0
chr11:65650157|65650601 hsa-miR-1915-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6796-3p 1 0 0
chr11:65650157|65650601 hsa-miR-3180-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6805-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6798-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6760-5p 1 0 0
chr11:65650157|65650601 hsa-miR-221-3p 1 0 0
chr11:65650157|65650601 hsa-miR-939-3p 1 0 0
chr11:65650157|65650601 hsa-miR-4763-5p 1 0 0
chr11:65650157|65650601 hsa-miR-1908-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6894-3p 1 0 0
chr11:65650157|65650601 hsa-miR-3614-5p 1 0 0
chr11:65650157|65650601 hsa-miR-3677-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6749-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6501-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6736-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6500-3p 1 0 0
chr11:65650157|65650601 hsa-miR-7112-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6743-3p 1 0 0
chr11:65650157|65650601 hsa-miR-7106-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6793-3p 1 0 0
chr11:65650157|65650601 hsa-miR-1910-5p 1 0 0
chr11:65650157|65650601 hsa-miR-4750-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6752-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6746-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6859-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6777-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6857-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6731-3p 1 0 0
chr11:65650157|65650601 hsa-miR-10400-5p 1 0 0
chr11:65650157|65650601 hsa-miR-1207-5p 1 0 0
chr11:65650157|65650601 hsa-miR-4763-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6775-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6726-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6743-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6754-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6756-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6803-5p 1 0 0
chr11:65650157|65650601 hsa-miR-11181-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6879-5p 1 0 0
chr11:65650157|65650601 hsa-miR-3127-3p 1 0 0
chr11:65650157|65650601 hsa-miR-3620-5p 1 0 0
chr11:65650157|65650601 hsa-miR-5196-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6780b-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6836-5p 1 0 0
chr11:65650157|65650601 hsa-miR-10396b-5p 1 0 0
chr11:65650157|65650601 hsa-miR-328-5p 1 0 0
chr11:65650157|65650601 hsa-miR-4685-5p 1 0 0
chr11:65650157|65650601 hsa-miR-4725-3p 1 0 0
chr11:65650157|65650601 hsa-miR-675-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6858-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6887-5p 1 0 0
chr11:65650157|65650601 hsa-miR-939-5p 1 0 0
chr11:65650157|65650601 hsa-miR-1266-5p 1 0 0
chr11:65650157|65650601 hsa-miR-3940-5p 1 0 0
chr11:65650157|65650601 hsa-miR-6750-5p 1 0 0
chr11:65650157|65650601 hsa-miR-4722-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6805-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6810-3p 1 0 0
chr11:65650157|65650601 hsa-miR-3622a-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6511b-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6797-3p 1 0 0
chr11:65650157|65650601 hsa-miR-6824-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:65650157|65650601
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MKTWGSRLSRTKAGGSAPADSQPQLMRGAPLVF
Nucleotide Sequence CTGAAGACATGGGGGTCAAGACTCAGCAGGACCAAGGCAGGGGGCAGTGCACCAGCTGACTCCCAGCCCCAGCTAATGAGAGGGGCCCCGCTGGTCTTCTAG
CircID chr11:65650157|65650601
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MWQQSPGQSSTPADRHEGGVMWAGKAAVGSWGAYSASDFGVPLGSP
Nucleotide Sequence ATGTGGCAGCAGAGCCCAGGACAGAGCTCCACCCCAGCAGACAGGCACGAAGGGGGGGTCATGTGGGCAGGTAAAGCGGCTGTGGGGAGTTGGGGAGCTTACTCAGCATCAGATTTTGGAGTTCCCTTAGGGTCTCCA
CircID chr11:65650157|65650601
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MSWALLPHMPRRPAGPLSLAGAGSQLVHCPLPWSC
Nucleotide Sequence CTGTCCTGGGCTCTGCTGCCACATATGCCTAGAAGACCAGCGGGGCCCCTCTCATTAGCTGGGGCTGGGAGTCAGCTGGTGCACTGCCCCCTGCCTTGGTCCTGCTGA
CircID chr11:65650157|65650601
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MTPMSSGQSLGTSQRRSLTWSPCSGSCRRTCRRRRRTGRPWRR
Nucleotide Sequence TTGACCCCCATGTCTTCAGGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTCACTTGGAGTCCATGCTCAGGAAGCTGCAGGAGGACCTGCAGAAGGAGAAGGCGGACAGGGCGGCCCTGGAGGAGG
CircID chr11:65650157|65650601
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MTPPSCLSAGVELCPGLCCHICLEDQRGPSH
Nucleotide Sequence ATGACCCCCCCTTCGTGCCTGTCTGCTGGGGTGGAGCTCTGTCCTGGGCTCTGCTGCCACATATGCCTAGAAGACCAGCGGGGCCCCTCTCATTAG
CircID chr11:65650157|65650601
ORF Type ORF6
Protein Length 53
Nucleotide Length 159
Protein Sequence MPPALVLLSLDPHVFRPEPGNLSEKVSHLESMLRKLQEDLQKEKADRAALEEE
Nucleotide Sequence CTGCCCCCTGCCTTGGTCCTGCTGAGTCTTGACCCCCATGTCTTCAGGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTCACTTGGAGTCCATGCTCAGGAAGCTGCAGGAGGACCTGCAGAAGGAGAAGGCGGACAGGGCGGCCCTGGAGGAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab