CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65778039|65778143
Strand -
CircType exon
Host Gene ENSG00000254470.2;
Algorism CIRI2;
Sequence AAAAGGCTCCAGGTGGCGGGACACCAAGCCCTCCAGGCCCTGTGGCCCAAGTGGACACCACACACGACTCTCAGCACCCTCTGGCAGGCAGGAATCCCAGAGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65778039|65778143 hsa-miR-326 1 1 1
chr11:65778039|65778143 hsa-miR-619-5p 0 0 1
chr11:65778039|65778143 hsa-miR-619-3p 0 0 1
chr11:65778039|65778143 hsa-miR-635 0 0 1
chr11:65778039|65778143 hsa-miR-330-5p 1 1 1
chr11:65778039|65778143 hsa-miR-220c 0 0 1
chr11:65778039|65778143 hsa-miR-644 0 0 1
chr11:65778039|65778143 hsa-miR-1254 0 0 1
chr11:65778039|65778143 hsa-miR-147 0 0 1
chr11:65778039|65778143 hsa-miR-608 1 0 0
chr11:65778039|65778143 hsa-miR-637 0 1 0
chr11:65778039|65778143 hsa-miR-658 1 0 0
chr11:65778039|65778143 hsa-miR-762 1 0 0
chr11:65778039|65778143 hsa-miR-760 1 0 0
chr11:65778039|65778143 hsa-miR-1182 1 0 0
chr11:65778039|65778143 hsa-miR-2861 0 1 0
chr11:65778039|65778143 hsa-miR-4258 0 1 0
chr11:65778039|65778143 hsa-miR-4254 0 1 0
chr11:65778039|65778143 hsa-miR-4270 1 0 0
chr11:65778039|65778143 hsa-miR-3621 1 0 0
chr11:65778039|65778143 hsa-miR-3657 0 1 0
chr11:65778039|65778143 hsa-miR-3659 1 0 0
chr11:65778039|65778143 hsa-miR-4518 1 0 0
chr11:65778039|65778143 hsa-miR-4656 1 0 0
chr11:65778039|65778143 hsa-miR-4706 1 0 0
chr11:65778039|65778143 hsa-miR-8073 1 0 0
chr11:65778039|65778143 hsa-miR-12126 0 1 0
chr11:65778039|65778143 hsa-miR-4665-3p 1 0 0
chr11:65778039|65778143 hsa-miR-6894-5p 1 0 0
chr11:65778039|65778143 hsa-miR-4687-3p 1 0 0
chr11:65778039|65778143 hsa-miR-6728-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6515-5p 0 1 0
chr11:65778039|65778143 hsa-miR-4722-5p 1 0 0
chr11:65778039|65778143 hsa-miR-7160-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6741-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6829-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6798-5p 1 0 0
chr11:65778039|65778143 hsa-miR-4436b-5p 0 1 0
chr11:65778039|65778143 hsa-miR-4640-5p 1 0 0
chr11:65778039|65778143 hsa-miR-3614-5p 0 1 0
chr11:65778039|65778143 hsa-miR-6749-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6781-5p 1 0 0
chr11:65778039|65778143 hsa-miR-1250-5p 1 0 0
chr11:65778039|65778143 hsa-miR-525-5p 1 0 0
chr11:65778039|65778143 hsa-miR-5089-5p 0 1 0
chr11:65778039|65778143 hsa-miR-4763-3p 1 0 0
chr11:65778039|65778143 hsa-miR-6726-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6752-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6803-5p 1 0 0
chr11:65778039|65778143 hsa-miR-7110-5p 1 0 0
chr11:65778039|65778143 hsa-miR-1249-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6751-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6774-5p 0 1 0
chr11:65778039|65778143 hsa-miR-4726-5p 1 1 0
chr11:65778039|65778143 hsa-miR-675-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6777-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6846-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6848-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6889-5p 1 0 0
chr11:65778039|65778143 hsa-miR-939-5p 1 0 0
chr11:65778039|65778143 hsa-miR-1271-3p 1 0 0
chr11:65778039|65778143 hsa-miR-4646-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6724-5p 1 0 0
chr11:65778039|65778143 hsa-miR-3059-5p 1 0 0
chr11:65778039|65778143 hsa-miR-6817-5p 1 1 0
chr11:65778039|65778143 hsa-miR-6824-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:65778039|65778143
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MPEGAESRVWCPLGPQGLEGLVSRHLEPF
Nucleotide Sequence CTGCCAGAGGGTGCTGAGAGTCGTGTGTGGTGTCCACTTGGGCCACAGGGCCTGGAGGGCTTGGTGTCCCGCCACCTGGAGCCTTTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab