CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65865069|65865261
Strand +
CircType exon
Host Gene ENSG00000172732.10;
Algorism CIRI2;
Sequence CTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTGGGTTCGGGAAAGGGCTGGATCAGTGGGGGTCTGGGCCAGGCCATGTCTGAGAAGCTAGGCAGAGACAGTACCTTATTCTTGATGGCTCCTGCGTTGAAGTCACTGAAGGTGAGGAGTGAGCAGAGAGGGTTTGGAGAGGTCATGGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65865069|65865261 hsa-miR-95-5p 0 0 1
chr11:65865069|65865261 hsa-miR-95-3p 0 0 1
chr11:65865069|65865261 hsa-miR-593-5p 0 0 1
chr11:65865069|65865261 hsa-miR-593-3p 0 0 1
chr11:65865069|65865261 hsa-miR-617 0 0 1
chr11:65865069|65865261 hsa-miR-640 0 0 1
chr11:65865069|65865261 hsa-miR-1178-5p 0 0 1
chr11:65865069|65865261 hsa-miR-1178-3p 0 0 1
chr11:65865069|65865261 hsa-miR-1250-5p 0 0 1
chr11:65865069|65865261 hsa-miR-1250-3p 0 0 1
chr11:65865069|65865261 hsa-miR-1324 0 0 1
chr11:65865069|65865261 hsa-miR-767-3p 0 1 1
chr11:65865069|65865261 hsa-miR-483-3p 0 1 1
chr11:65865069|65865261 hsa-miR-515-5p 0 0 1
chr11:65865069|65865261 hsa-miR-129-3p 0 0 1
chr11:65865069|65865261 hsa-miR-484 1 0 0
chr11:65865069|65865261 hsa-miR-631 1 1 0
chr11:65865069|65865261 hsa-miR-661 1 0 0
chr11:65865069|65865261 hsa-miR-1538 1 1 0
chr11:65865069|65865261 hsa-miR-4276 0 1 0
chr11:65865069|65865261 hsa-miR-4466 1 0 0
chr11:65865069|65865261 hsa-miR-5190 1 1 0
chr11:65865069|65865261 hsa-miR-4747-3p 1 0 0
chr11:65865069|65865261 hsa-miR-6720-5p 0 1 0
chr11:65865069|65865261 hsa-miR-6892-3p 0 1 0
chr11:65865069|65865261 hsa-miR-505-5p 0 1 0
chr11:65865069|65865261 hsa-miR-6728-3p 0 1 0
chr11:65865069|65865261 hsa-miR-4713-5p 1 0 0
chr11:65865069|65865261 hsa-miR-6821-3p 1 1 0
chr11:65865069|65865261 hsa-miR-6818-3p 0 1 0
chr11:65865069|65865261 hsa-miR-7111-3p 0 1 0
chr11:65865069|65865261 hsa-miR-1304-3p 1 0 0
chr11:65865069|65865261 hsa-miR-4640-3p 1 0 0
chr11:65865069|65865261 hsa-miR-6869-5p 1 0 0
chr11:65865069|65865261 hsa-miR-6828-3p 0 1 0
chr11:65865069|65865261 hsa-miR-6508-3p 0 1 0
chr11:65865069|65865261 hsa-miR-6859-3p 0 1 0
chr11:65865069|65865261 hsa-miR-942-3p 0 1 0
chr11:65865069|65865261 hsa-miR-676-5p 0 1 0
chr11:65865069|65865261 hsa-miR-3156-3p 0 1 0
chr11:65865069|65865261 hsa-miR-675-5p 1 0 0
chr11:65865069|65865261 hsa-miR-4723-3p 1 1 0
chr11:65865069|65865261 hsa-miR-6512-3p 0 1 0
chr11:65865069|65865261 hsa-miR-6769b-3p 0 1 0
chr11:65865069|65865261 hsa-miR-6876-3p 1 1 0
chr11:65865069|65865261 hsa-miR-129-1-3p 0 1 0
chr11:65865069|65865261 hsa-miR-129-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:65865069|65865261
ORF Type ORF1
Protein Length 64
Nucleotide Length 192
Protein Sequence LHQLPGKHFSHRLGLGSGKGWISGGLGQAMSEKLGRDSTLFLMAPALKSLKVRSEQRGFGEVMA
Nucleotide Sequence CTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTGGGTTCGGGAAAGGGCTGGATCAGTGGGGGTCTGGGCCAGGCCATGTCTGAGAAGCTAGGCAGAGACAGTACCTTATTCTTGATGGCTCCTGCGTTGAAGTCACTGAAGGTGAGGAGTGAGCAGAGAGGGTTTGGAGAGGTCATGGCC

CircID chr11:65865069|65865261
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MAQTPTDPALSRTQAQSVREVFARQLMQ
Nucleotide Sequence CTGGCCCAGACCCCCACTGATCCAGCCCTTTCCCGAACCCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAG

CircID chr11:65865069|65865261
ORF Type ORF3
Protein Length 60
Nucleotide Length 183
Protein Sequence MTSPNPLCSLLTFSDFNAGAIKNKVLSLPSFSDMAWPRPPLIQPFPEPRPSRCEKCLPGS
Nucleotide Sequence ATGACCTCTCCAAACCCTCTCTGCTCACTCCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTCAGACATGGCCTGGCCCAGACCCCCACTGATCCAGCCCTTTCCCGAACCCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites