CircRNA Information

General Information
circRNA Basic Information
CircID chr11:65919494|65919972
Strand +
CircType exon
Host Gene ENSG00000175550.6;
Algorism CIRI2;
Sequence TCTAGGAAGAGCTCGAGCGCCCGGGAGATGATGACAGGCACCGCCGCCGCCACCTTCCCAATCTCTTCGTCCGTCTGCATGATCTTCTTGATCCGCGCCTGCGGGTGGGGGAGCAGAGTTCAGACCCCGTCGCCACCGTCCCCTAAGGGGGTGCTGGGGGAGGAAGGGGCATCCCCGGAGAAAGGGGGCGGGGGACACGGACGCGGGGAGGGCATGGAGGGGGCGGGGCGTCCAGGCCCCCGAACACCGCGGCGCGCCCGCCTGCCCAGCGGGAACTGGGCCCAAGCCACCCGGGAGCCGGGCCCACTCCTGCCGGGCTCTGCCACGTGCTCACCGGCGGGAACCGCGCGTTGTACTTCTTCTTCTTGCTCGGCATCTCGGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:65919494|65919972 hsa-miR-384 0 0 1
chr11:65919494|65919972 hsa-miR-523-5p 0 0 1
chr11:65919494|65919972 hsa-miR-523-3p 0 0 1
chr11:65919494|65919972 hsa-miR-612 0 1 1
chr11:65919494|65919972 hsa-miR-635 0 0 1
chr11:65919494|65919972 hsa-miR-1236-5p 0 0 1
chr11:65919494|65919972 hsa-miR-1236-3p 0 0 1
chr11:65919494|65919972 hsa-miR-296-5p 0 0 1
chr11:65919494|65919972 hsa-miR-542-5p 0 0 1
chr11:65919494|65919972 hsa-miR-361-3p 0 0 1
chr11:65919494|65919972 hsa-miR-767-3p 0 0 1
chr11:65919494|65919972 hsa-miR-550 0 0 1
chr11:65919494|65919972 hsa-miR-1285 0 0 1
chr11:65919494|65919972 hsa-miR-1254 0 0 1
chr11:65919494|65919972 hsa-miR-1273 0 0 1
chr11:65919494|65919972 hsa-miR-184 0 1 0
chr11:65919494|65919972 hsa-miR-326 1 0 0
chr11:65919494|65919972 hsa-miR-608 1 1 0
chr11:65919494|65919972 hsa-miR-661 1 0 0
chr11:65919494|65919972 hsa-miR-663a 1 0 0
chr11:65919494|65919972 hsa-miR-765 1 0 0
chr11:65919494|65919972 hsa-miR-940 1 0 0
chr11:65919494|65919972 hsa-miR-1470 1 0 0
chr11:65919494|65919972 hsa-miR-1538 0 1 0
chr11:65919494|65919972 hsa-miR-1913 1 1 0
chr11:65919494|65919972 hsa-miR-2861 1 0 0
chr11:65919494|65919972 hsa-miR-3147 1 0 0
chr11:65919494|65919972 hsa-miR-3185 0 1 0
chr11:65919494|65919972 hsa-miR-3196 1 0 0
chr11:65919494|65919972 hsa-miR-4313 0 1 0
chr11:65919494|65919972 hsa-miR-4290 0 1 0
chr11:65919494|65919972 hsa-miR-3916 1 1 0
chr11:65919494|65919972 hsa-miR-3937 0 1 0
chr11:65919494|65919972 hsa-miR-1268b 1 0 0
chr11:65919494|65919972 hsa-miR-4463 1 0 0
chr11:65919494|65919972 hsa-miR-4467 1 1 0
chr11:65919494|65919972 hsa-miR-4488 1 0 0
chr11:65919494|65919972 hsa-miR-4498 1 0 0
chr11:65919494|65919972 hsa-miR-4533 1 0 0
chr11:65919494|65919972 hsa-miR-3960 1 1 0
chr11:65919494|65919972 hsa-miR-4674 0 1 0
chr11:65919494|65919972 hsa-miR-4767 1 1 0
chr11:65919494|65919972 hsa-miR-5192 1 0 0
chr11:65919494|65919972 hsa-miR-5193 0 1 0
chr11:65919494|65919972 hsa-miR-5739 1 0 0
chr11:65919494|65919972 hsa-miR-6070 0 1 0
chr11:65919494|65919972 hsa-miR-6086 1 1 0
chr11:65919494|65919972 hsa-miR-6860 1 1 0
chr11:65919494|65919972 hsa-miR-8085 1 0 0
chr11:65919494|65919972 hsa-miR-9899 1 1 0
chr11:65919494|65919972 hsa-miR-4433b-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6749-3p 0 1 0
chr11:65919494|65919972 hsa-miR-214-5p 0 1 0
chr11:65919494|65919972 hsa-miR-92a-1-5p 1 0 0
chr11:65919494|65919972 hsa-miR-3194-3p 0 1 0
chr11:65919494|65919972 hsa-miR-4433a-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6836-3p 1 0 0
chr11:65919494|65919972 hsa-miR-215-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6861-5p 1 1 0
chr11:65919494|65919972 hsa-miR-6825-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4708-5p 0 1 0
chr11:65919494|65919972 hsa-miR-6799-5p 1 0 0
chr11:65919494|65919972 hsa-miR-1225-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6880-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6746-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4709-3p 1 0 0
chr11:65919494|65919972 hsa-miR-4722-5p 1 1 0
chr11:65919494|65919972 hsa-miR-3187-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6716-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6796-3p 1 0 0
chr11:65919494|65919972 hsa-miR-4697-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6732-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6805-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6798-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6728-3p 0 1 0
chr11:65919494|65919972 hsa-miR-3150b-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6774-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6735-3p 1 0 0
chr11:65919494|65919972 hsa-miR-4713-5p 0 1 0
chr11:65919494|65919972 hsa-miR-6786-5p 1 0 0
chr11:65919494|65919972 hsa-miR-939-3p 1 1 0
chr11:65919494|65919972 hsa-miR-4763-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6763-3p 1 0 0
chr11:65919494|65919972 hsa-miR-7108-3p 1 1 0
chr11:65919494|65919972 hsa-miR-1247-5p 1 1 0
chr11:65919494|65919972 hsa-miR-185-5p 1 0 0
chr11:65919494|65919972 hsa-miR-1229-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4783-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6514-3p 0 1 0
chr11:65919494|65919972 hsa-miR-885-3p 1 0 0
chr11:65919494|65919972 hsa-miR-1228-5p 1 0 0
chr11:65919494|65919972 hsa-miR-3667-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6771-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4690-5p 1 0 0
chr11:65919494|65919972 hsa-miR-92b-5p 0 1 0
chr11:65919494|65919972 hsa-miR-3648 0 1 0
chr11:65919494|65919972 hsa-miR-4787-5p 1 0 0
chr11:65919494|65919972 hsa-miR-324-5p 0 1 0
chr11:65919494|65919972 hsa-miR-149-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6824-5p 1 1 0
chr11:65919494|65919972 hsa-miR-4640-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6786-3p 1 1 0
chr11:65919494|65919972 hsa-miR-6886-5p 0 1 0
chr11:65919494|65919972 hsa-miR-4707-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6499-5p 0 1 0
chr11:65919494|65919972 hsa-miR-6828-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6887-3p 0 1 0
chr11:65919494|65919972 hsa-miR-1224-3p 1 0 0
chr11:65919494|65919972 hsa-miR-4746-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6752-3p 1 1 0
chr11:65919494|65919972 hsa-miR-6872-3p 0 1 0
chr11:65919494|65919972 hsa-miR-3605-3p 1 1 0
chr11:65919494|65919972 hsa-miR-4632-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6886-3p 0 1 0
chr11:65919494|65919972 hsa-miR-4749-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6770-3p 1 1 0
chr11:65919494|65919972 hsa-miR-3173-5p 0 1 0
chr11:65919494|65919972 hsa-miR-6789-3p 1 1 0
chr11:65919494|65919972 hsa-miR-3162-3p 1 0 0
chr11:65919494|65919972 hsa-miR-4787-3p 1 0 0
chr11:65919494|65919972 hsa-miR-5581-3p 0 1 0
chr11:65919494|65919972 hsa-miR-579-5p 0 1 0
chr11:65919494|65919972 hsa-miR-10400-5p 1 1 0
chr11:65919494|65919972 hsa-miR-1207-5p 1 0 0
chr11:65919494|65919972 hsa-miR-1233-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4763-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6769b-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6787-5p 1 1 0
chr11:65919494|65919972 hsa-miR-6865-5p 0 1 0
chr11:65919494|65919972 hsa-miR-6756-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6803-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6815-5p 1 1 0
chr11:65919494|65919972 hsa-miR-6851-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6751-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4685-3p 0 1 0
chr11:65919494|65919972 hsa-miR-3620-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4728-5p 1 0 0
chr11:65919494|65919972 hsa-miR-5189-5p 0 1 0
chr11:65919494|65919972 hsa-miR-5196-5p 1 1 0
chr11:65919494|65919972 hsa-miR-1237-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4632-5p 0 1 0
chr11:65919494|65919972 hsa-miR-4745-5p 1 1 0
chr11:65919494|65919972 hsa-miR-6883-5p 1 0 0
chr11:65919494|65919972 hsa-miR-3187-5p 0 1 0
chr11:65919494|65919972 hsa-miR-939-5p 1 0 0
chr11:65919494|65919972 hsa-miR-10394-3p 0 1 0
chr11:65919494|65919972 hsa-miR-1271-3p 0 1 0
chr11:65919494|65919972 hsa-miR-6773-5p 0 1 0
chr11:65919494|65919972 hsa-miR-6791-3p 0 1 0
chr11:65919494|65919972 hsa-miR-3679-5p 1 0 0
chr11:65919494|65919972 hsa-miR-4747-5p 1 1 0
chr11:65919494|65919972 hsa-miR-6785-5p 1 0 0
chr11:65919494|65919972 hsa-miR-6724-5p 1 1 0
chr11:65919494|65919972 hsa-miR-6756-3p 1 1 0
chr11:65919494|65919972 hsa-miR-10401-3p 1 0 0
chr11:65919494|65919972 hsa-miR-6805-3p 1 1 0
chr11:65919494|65919972 hsa-miR-6810-3p 1 1 0
chr11:65919494|65919972 hsa-miR-6829-3p 0 1 0
chr11:65919494|65919972 hsa-miR-433-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:65919494|65919972
ORF Type ORF1
Protein Length 119
Nucleotide Length 357
Protein Sequence MMTGTAAATFPISSSVCMIFLIRACGWGSRVQTPSPPSPKGVLGEEGASPEKGGGGHGRGEGMEGAGRPGPRTPRRARLPSGNWAQATREPGPLLPGSATCSPAGTARCTSSSCSASRG
Nucleotide Sequence ATGATGACAGGCACCGCCGCCGCCACCTTCCCAATCTCTTCGTCCGTCTGCATGATCTTCTTGATCCGCGCCTGCGGGTGGGGGAGCAGAGTTCAGACCCCGTCGCCACCGTCCCCTAAGGGGGTGCTGGGGGAGGAAGGGGCATCCCCGGAGAAAGGGGGCGGGGGACACGGACGCGGGGAGGGCATGGAGGGGGCGGGGCGTCCAGGCCCCCGAACACCGCGGCGCGCCCGCCTGCCCAGCGGGAACTGGGCCCAAGCCACCCGGGAGCCGGGCCCACTCCTGCCGGGCTCTGCCACGTGCTCACCGGCGGGAACCGCGCGTTGTACTTCTTCTTCTTGCTCGGCATCTCGGGGC
CircID chr11:65919494|65919972
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MGPSHPGAGPTPAGLCHVLTGGNRALYFFFLLGISG
Nucleotide Sequence CTGGGCCCAAGCCACCCGGGAGCCGGGCCCACTCCTGCCGGGCTCTGCCACGTGCTCACCGGCGGGAACCGCGCGTTGTACTTCTTCTTCTTGCTCGGCATCTCGGGG
CircID chr11:65919494|65919972
ORF Type ORF3
Protein Length 95
Nucleotide Length 285
Protein Sequence MGPVPAGQAGAPRCSGAWTPRPLHALPASVSPAPFLRGCPFLPQHPLRGRWRRGLNSAPPPAGADQEDHADGRRDWEGGGGGACHHLPGARALPR
Nucleotide Sequence TTGGGCCCAGTTCCCGCTGGGCAGGCGGGCGCGCCGCGGTGTTCGGGGGCCTGGACGCCCCGCCCCCTCCATGCCCTCCCCGCGTCCGTGTCCCCCGCCCCCTTTCTCCGGGGATGCCCCTTCCTCCCCCAGCACCCCCTTAGGGGACGGTGGCGACGGGGTCTGAACTCTGCTCCCCCACCCGCAGGCGCGGATCAAGAAGATCATGCAGACGGACGAAGAGATTGGGAAGGTGGCGGCGGCGGTGCCTGTCATCATCTCCCGGGCGCTCGAGCTCTTCCTAGA
CircID chr11:65919494|65919972
ORF Type ORF4
Protein Length 49
Nucleotide Length 150
Protein Sequence MGRRARRGVRGPGRPAPSMPSPRPCPPPPFSGDAPSSPSTPLGDGGDGV
Nucleotide Sequence CTGGGCAGGCGGGCGCGCCGCGGTGTTCGGGGGCCTGGACGCCCCGCCCCCTCCATGCCCTCCCCGCGTCCGTGTCCCCCGCCCCCTTTCTCCGGGGATGCCCCTTCCTCCCCCAGCACCCCCTTAGGGGACGGTGGCGACGGGGTCTGA
CircID chr11:65919494|65919972
ORF Type ORF5
Protein Length 38
Nucleotide Length 114
Protein Sequence MLPHPQARIKKIMQTDEEIGKVAAAVPVIISRALELFL
Nucleotide Sequence CTGCTCCCCCACCCGCAGGCGCGGATCAAGAAGATCATGCAGACGGACGAAGAGATTGGGAAGGTGGCGGCGGCGGTGCCTGTCATCATCTCCCGGGCGCTCGAGCTCTTCCTA
CircID chr11:65919494|65919972
ORF Type ORF6
Protein Length 77
Nucleotide Length 234
Protein Sequence MPSKKKKYNARFPPVSTWQSPAGVGPAPGWLGPSSRWAGGRAAVFGGLDAPPPPCPPRVRVPRPLSPGMPLPPPAPP
Nucleotide Sequence ATGCCGAGCAAGAAGAAGAAGTACAACGCGCGGTTCCCGCCGGTGAGCACGTGGCAGAGCCCGGCAGGAGTGGGCCCGGCTCCCGGGTGGCTTGGGCCCAGTTCCCGCTGGGCAGGCGGGCGCGCCGCGGTGTTCGGGGGCCTGGACGCCCCGCCCCCTCCATGCCCTCCCCGCGTCCGTGTCCCCCGCCCCCTTTCTCCGGGGATGCCCCTTCCTCCCCCAGCACCCCCTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab