CircRNA Information

General Information
circRNA Basic Information
CircID chr11:66061722|66063033
Strand +
CircType exon
Host Gene ENSG00000087365.13;
Algorism CIRI2;
Sequence CAGCATGGTACCCAAAGGAACAGCTCTCAGGGATGGGCGAGTTCAGCCCAGGGATTTTCAGGTTGGGATACGATGGGGGTGGTCCATATCGCTGCATGGCAATCAGCCATGGGGGAGGGACCTTGTGGGCATTCTGCAGGAAAAAGAGAACAGGATACCATCTGCCAAACCCTATCCCTGTCTCTGCCTTCCACTCCAATCCCCACCAGCCTCTTCGCTGCTTCCCCAGACAGCTAACTGACACTCACTGGTCCTACTGGCATCCCCAAGGAAATCCTTAGCTCATCAGACAGATCTCCTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:66061722|66063033 hsa-miR-96-5p 0 0 1
chr11:66061722|66063033 hsa-miR-96-3p 0 0 1
chr11:66061722|66063033 hsa-miR-182-5p 0 0 1
chr11:66061722|66063033 hsa-miR-182-3p 0 0 1
chr11:66061722|66063033 hsa-miR-223-5p 0 0 1
chr11:66061722|66063033 hsa-miR-223-3p 0 0 1
chr11:66061722|66063033 hsa-miR-122-5p 0 0 1
chr11:66061722|66063033 hsa-miR-122-3p 0 0 1
chr11:66061722|66063033 hsa-miR-503-5p 0 0 1
chr11:66061722|66063033 hsa-miR-503-3p 0 0 1
chr11:66061722|66063033 hsa-miR-605-5p 0 0 1
chr11:66061722|66063033 hsa-miR-605-3p 0 0 1
chr11:66061722|66063033 hsa-miR-610 0 1 1
chr11:66061722|66063033 hsa-miR-624-5p 0 0 1
chr11:66061722|66063033 hsa-miR-624-3p 0 0 1
chr11:66061722|66063033 hsa-miR-626 0 0 1
chr11:66061722|66063033 hsa-miR-637 0 0 1
chr11:66061722|66063033 hsa-miR-1271-5p 0 0 1
chr11:66061722|66063033 hsa-miR-1271-3p 0 0 1
chr11:66061722|66063033 hsa-miR-298 1 0 1
chr11:66061722|66063033 hsa-miR-541-5p 0 0 1
chr11:66061722|66063033 hsa-miR-541-3p 0 0 1
chr11:66061722|66063033 hsa-miR-665 0 0 1
chr11:66061722|66063033 hsa-miR-935 0 0 1
chr11:66061722|66063033 hsa-miR-1231 0 1 1
chr11:66061722|66063033 hsa-miR-491-5p 0 0 1
chr11:66061722|66063033 hsa-miR-296-3p 0 0 1
chr11:66061722|66063033 hsa-miR-485-5p 0 1 1
chr11:66061722|66063033 hsa-miR-574-5p 0 0 1
chr11:66061722|66063033 hsa-miR-1225-5p 0 0 1
chr11:66061722|66063033 hsa-miR-654-5p 0 0 1
chr11:66061722|66063033 hsa-miR-361-3p 0 0 1
chr11:66061722|66063033 hsa-miR-502-5p 0 0 1
chr11:66061722|66063033 hsa-miR-556-5p 0 0 1
chr11:66061722|66063033 hsa-miR-125a-5p 0 1 1
chr11:66061722|66063033 hsa-miR-876-5p 0 0 1
chr11:66061722|66063033 hsa-miR-125b 0 0 1
chr11:66061722|66063033 hsa-miR-138 0 0 1
chr11:66061722|66063033 hsa-miR-365 0 0 1
chr11:66061722|66063033 hsa-miR-325 1 1 0
chr11:66061722|66063033 hsa-miR-650 1 0 0
chr11:66061722|66063033 hsa-miR-762 1 0 0
chr11:66061722|66063033 hsa-miR-1275 1 0 0
chr11:66061722|66063033 hsa-miR-2110 1 1 0
chr11:66061722|66063033 hsa-miR-2117 0 1 0
chr11:66061722|66063033 hsa-miR-3154 1 0 0
chr11:66061722|66063033 hsa-miR-1193 1 0 0
chr11:66061722|66063033 hsa-miR-3188 1 0 0
chr11:66061722|66063033 hsa-miR-3196 1 0 0
chr11:66061722|66063033 hsa-miR-4324 0 1 0
chr11:66061722|66063033 hsa-miR-4271 1 0 0
chr11:66061722|66063033 hsa-miR-4292 0 1 0
chr11:66061722|66063033 hsa-miR-4421 0 1 0
chr11:66061722|66063033 hsa-miR-4450 0 1 0
chr11:66061722|66063033 hsa-miR-4458 1 0 0
chr11:66061722|66063033 hsa-miR-4505 1 0 0
chr11:66061722|66063033 hsa-miR-4521 0 1 0
chr11:66061722|66063033 hsa-miR-1587 1 1 0
chr11:66061722|66063033 hsa-miR-4739 1 0 0
chr11:66061722|66063033 hsa-miR-4741 1 0 0
chr11:66061722|66063033 hsa-miR-5698 1 0 0
chr11:66061722|66063033 hsa-miR-5787 1 0 0
chr11:66061722|66063033 hsa-miR-6081 1 0 0
chr11:66061722|66063033 hsa-miR-6085 1 0 0
chr11:66061722|66063033 hsa-miR-6086 1 0 0
chr11:66061722|66063033 hsa-miR-6090 1 0 0
chr11:66061722|66063033 hsa-miR-6125 1 0 0
chr11:66061722|66063033 hsa-miR-6131 1 0 0
chr11:66061722|66063033 hsa-miR-8089 1 1 0
chr11:66061722|66063033 hsa-miR-211-3p 0 1 0
chr11:66061722|66063033 hsa-miR-26b-3p 0 1 0
chr11:66061722|66063033 hsa-miR-4433b-3p 1 1 0
chr11:66061722|66063033 hsa-miR-92a-2-5p 0 1 0
chr11:66061722|66063033 hsa-miR-4433a-3p 1 0 0
chr11:66061722|66063033 hsa-miR-671-5p 1 1 0
chr11:66061722|66063033 hsa-miR-3150a-3p 1 0 0
chr11:66061722|66063033 hsa-miR-6825-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6857-5p 1 1 0
chr11:66061722|66063033 hsa-miR-4687-3p 1 0 0
chr11:66061722|66063033 hsa-miR-6728-5p 0 1 0
chr11:66061722|66063033 hsa-miR-1236-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4768-3p 0 1 0
chr11:66061722|66063033 hsa-miR-6089 1 0 0
chr11:66061722|66063033 hsa-miR-6757-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4695-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4653-3p 1 0 0
chr11:66061722|66063033 hsa-miR-7160-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6890-5p 0 1 0
chr11:66061722|66063033 hsa-miR-6741-5p 1 0 0
chr11:66061722|66063033 hsa-miR-3189-5p 1 0 0
chr11:66061722|66063033 hsa-miR-7845-5p 1 1 0
chr11:66061722|66063033 hsa-miR-6732-5p 1 0 0
chr11:66061722|66063033 hsa-miR-3190-3p 0 1 0
chr11:66061722|66063033 hsa-miR-6798-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6782-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6810-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4733-5p 0 1 0
chr11:66061722|66063033 hsa-miR-6786-5p 1 0 0
chr11:66061722|66063033 hsa-miR-939-3p 0 1 0
chr11:66061722|66063033 hsa-miR-1226-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6740-5p 1 0 0
chr11:66061722|66063033 hsa-miR-1229-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4640-5p 1 0 0
chr11:66061722|66063033 hsa-miR-885-3p 1 0 0
chr11:66061722|66063033 hsa-miR-1266-3p 0 1 0
chr11:66061722|66063033 hsa-miR-4446-3p 1 0 0
chr11:66061722|66063033 hsa-miR-149-3p 1 0 0
chr11:66061722|66063033 hsa-miR-4640-3p 1 0 0
chr11:66061722|66063033 hsa-miR-4776-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6866-5p 1 1 0
chr11:66061722|66063033 hsa-miR-664b-5p 1 0 0
chr11:66061722|66063033 hsa-miR-3619-3p 1 0 0
chr11:66061722|66063033 hsa-miR-6895-3p 0 1 0
chr11:66061722|66063033 hsa-miR-3074-5p 0 1 0
chr11:66061722|66063033 hsa-miR-670-5p 0 1 0
chr11:66061722|66063033 hsa-miR-1207-5p 1 0 0
chr11:66061722|66063033 hsa-miR-1233-5p 0 1 0
chr11:66061722|66063033 hsa-miR-4763-3p 1 0 0
chr11:66061722|66063033 hsa-miR-6769b-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6778-5p 1 1 0
chr11:66061722|66063033 hsa-miR-6870-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6893-5p 1 1 0
chr11:66061722|66063033 hsa-miR-1343-5p 1 0 0
chr11:66061722|66063033 hsa-miR-5001-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6752-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6754-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6756-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6803-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6813-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6819-5p 1 1 0
chr11:66061722|66063033 hsa-miR-6751-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6763-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6808-5p 1 0 0
chr11:66061722|66063033 hsa-miR-7111-5p 1 0 0
chr11:66061722|66063033 hsa-miR-3620-5p 1 1 0
chr11:66061722|66063033 hsa-miR-5196-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6780b-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4725-3p 1 0 0
chr11:66061722|66063033 hsa-miR-6846-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6858-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4723-5p 1 0 0
chr11:66061722|66063033 hsa-miR-939-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4758-5p 1 0 0
chr11:66061722|66063033 hsa-miR-1910-3p 0 1 0
chr11:66061722|66063033 hsa-miR-6511a-5p 0 1 0
chr11:66061722|66063033 hsa-miR-3085-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6731-5p 1 0 0
chr11:66061722|66063033 hsa-miR-4665-5p 1 0 0
chr11:66061722|66063033 hsa-miR-6855-5p 1 1 0
chr11:66061722|66063033 hsa-miR-4700-5p 1 1 0
chr11:66061722|66063033 hsa-miR-10398-3p 1 0 0
chr11:66061722|66063033 hsa-miR-4667-5p 1 1 0
chr11:66061722|66063033 hsa-miR-6790-5p 0 1 0
chr11:66061722|66063033 hsa-miR-6791-5p 0 1 0
chr11:66061722|66063033 hsa-miR-6843-3p 0 1 0
chr11:66061722|66063033 hsa-miR-365a-3p 0 1 0
chr11:66061722|66063033 hsa-miR-365b-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:66061722|66063033
ORF Type ORF1
Protein Length 54
Nucleotide Length 165
Protein Sequence MGVVHIAAWQSAMGEGPCGHSAGKREQDTICQTLSLSLPSTPIPTSLFAASPDS
Nucleotide Sequence ATGGGGGTGGTCCATATCGCTGCATGGCAATCAGCCATGGGGGAGGGACCTTGTGGGCATTCTGCAGGAAAAAGAGAACAGGATACCATCTGCCAAACCCTATCCCTGTCTCTGCCTTCCACTCCAATCCCCACCAGCCTCTTCGCTGCTTCCCCAGACAGCTAA
CircID chr11:66061722|66063033
ORF Type ORF2
Protein Length 78
Nucleotide Length 237
Protein Sequence MVPKGTALRDGRVQPRDFQVGIRWGWSISLHGNQPWGRDLVGILQEKENRIPSAKPYPCLCLPLQSPPASSLLPQTAN
Nucleotide Sequence ATGGTACCCAAAGGAACAGCTCTCAGGGATGGGCGAGTTCAGCCCAGGGATTTTCAGGTTGGGATACGATGGGGGTGGTCCATATCGCTGCATGGCAATCAGCCATGGGGGAGGGACCTTGTGGGCATTCTGCAGGAAAAAGAGAACAGGATACCATCTGCCAAACCCTATCCCTGTCTCTGCCTTCCACTCCAATCCCCACCAGCCTCTTCGCTGCTTCCCCAGACAGCTAACTGA
CircID chr11:66061722|66063033
ORF Type ORF3
Protein Length 82
Nucleotide Length 249
Protein Sequence MGEFSPGIFRLGYDGGGPYRCMAISHGGGTLWAFCRKKRTGYHLPNPIPVSAFHSNPHQPLRCFPRQLTDTHWSYWHPQGNP
Nucleotide Sequence ATGGGCGAGTTCAGCCCAGGGATTTTCAGGTTGGGATACGATGGGGGTGGTCCATATCGCTGCATGGCAATCAGCCATGGGGGAGGGACCTTGTGGGCATTCTGCAGGAAAAAGAGAACAGGATACCATCTGCCAAACCCTATCCCTGTCTCTGCCTTCCACTCCAATCCCCACCAGCCTCTTCGCTGCTTCCCCAGACAGCTAACTGACACTCACTGGTCCTACTGGCATCCCCAAGGAAATCCTTAG
CircID chr11:66061722|66063033
ORF Type ORF4
Protein Length 68
Nucleotide Length 207
Protein Sequence MSGEAAKRLVGIGVEGRDRDRVWQMVSCSLFPAECPQGPSPMADCHAAIWTTPIVSQPENPWAELAHP
Nucleotide Sequence CTGTCTGGGGAAGCAGCGAAGAGGCTGGTGGGGATTGGAGTGGAAGGCAGAGACAGGGATAGGGTTTGGCAGATGGTATCCTGTTCTCTTTTTCCTGCAGAATGCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTGAACTCGCCCATCCCTGA
CircID chr11:66061722|66063033
ORF Type ORF5
Protein Length 76
Nucleotide Length 228
Protein Sequence MGKQRRGWWGLEWKAETGIGFGRWYPVLFFLQNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSFGYHA
Nucleotide Sequence CTGGGGAAGCAGCGAAGAGGCTGGTGGGGATTGGAGTGGAAGGCAGAGACAGGGATAGGGTTTGGCAGATGGTATCCTGTTCTCTTTTTCCTGCAGAATGCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTGAACTCGCCCATCCCTGAGAGCTGTTCCTTTGGGTACCATGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab