CircRNA Information

General Information
circRNA Basic Information
CircID chr11:66263660|66263952
Strand +
CircType exon
Host Gene ENSG00000174996.10;
Algorism CIRI2;
Sequence CTTCTCCCGGATCTCCAGTGCCCGCTTGCACAATGGCTCAGCCTCCTTGTACTTGCCCCTCTTGCCATACAGGACTGCCAGGTTGTTTAGTGTCGCAGCCACCTGGAGGTGGGAGAACGGAAGCTTCTTGACTCAGGCCCTGCAGGACTCTGGGACCTGCAGGGGATGGGGCACAGCCCCCACCTCCCACCCAACCCTCACTCACGGCTGGGTGGTCCTTGCCCAGTGTTTTCTCCCGGATGGCCAGAGCATCATTGAGCAGGTGGGCAGCCTCCTTGTACTTGTTCTGATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:66263660|66263952 hsa-miR-19a-5p 0 0 1
chr11:66263660|66263952 hsa-miR-19a-3p 0 0 1
chr11:66263660|66263952 hsa-miR-31-5p 0 0 1
chr11:66263660|66263952 hsa-miR-31-3p 0 0 1
chr11:66263660|66263952 hsa-miR-34a-5p 0 0 1
chr11:66263660|66263952 hsa-miR-34a-3p 0 0 1
chr11:66263660|66263952 hsa-miR-183-5p 0 0 1
chr11:66263660|66263952 hsa-miR-183-3p 0 0 1
chr11:66263660|66263952 hsa-miR-141-5p 0 0 1
chr11:66263660|66263952 hsa-miR-141-3p 0 0 1
chr11:66263660|66263952 hsa-miR-150-5p 0 0 1
chr11:66263660|66263952 hsa-miR-150-3p 0 0 1
chr11:66263660|66263952 hsa-miR-200a-5p 0 0 1
chr11:66263660|66263952 hsa-miR-200a-3p 0 0 1
chr11:66263660|66263952 hsa-miR-383-5p 0 0 1
chr11:66263660|66263952 hsa-miR-383-3p 0 0 1
chr11:66263660|66263952 hsa-miR-449a 0 0 1
chr11:66263660|66263952 hsa-miR-570-5p 0 0 1
chr11:66263660|66263952 hsa-miR-570-3p 0 0 1
chr11:66263660|66263952 hsa-miR-604 0 0 1
chr11:66263660|66263952 hsa-miR-612 0 0 1
chr11:66263660|66263952 hsa-miR-620 0 0 1
chr11:66263660|66263952 hsa-miR-624-5p 0 0 1
chr11:66263660|66263952 hsa-miR-624-3p 0 0 1
chr11:66263660|66263952 hsa-miR-647 0 0 1
chr11:66263660|66263952 hsa-miR-449b-5p 0 0 1
chr11:66263660|66263952 hsa-miR-449b-3p 0 0 1
chr11:66263660|66263952 hsa-miR-657 0 0 1
chr11:66263660|66263952 hsa-miR-1205 0 0 1
chr11:66263660|66263952 hsa-miR-1293 0 0 1
chr11:66263660|66263952 hsa-miR-1262 0 0 1
chr11:66263660|66263952 hsa-miR-1270 0 0 1
chr11:66263660|66263952 hsa-miR-1322 0 0 1
chr11:66263660|66263952 hsa-miR-486-5p 0 0 1
chr11:66263660|66263952 hsa-miR-532-3p 0 0 1
chr11:66263660|66263952 hsa-miR-296-3p 0 0 1
chr11:66263660|66263952 hsa-miR-485-5p 0 0 1
chr11:66263660|66263952 hsa-miR-490-3p 0 0 1
chr11:66263660|66263952 hsa-miR-423-5p 1 0 1
chr11:66263660|66263952 hsa-miR-1224-3p 0 0 1
chr11:66263660|66263952 hsa-miR-331-3p 0 0 1
chr11:66263660|66263952 hsa-miR-767-3p 0 0 1
chr11:66263660|66263952 hsa-miR-34c-5p 0 0 1
chr11:66263660|66263952 hsa-miR-1260 0 0 1
chr11:66263660|66263952 hsa-miR-1280 0 0 1
chr11:66263660|66263952 hsa-miR-1285 0 0 1
chr11:66263660|66263952 hsa-miR-19b 0 0 1
chr11:66263660|66263952 hsa-miR-648 1 0 0
chr11:66263660|66263952 hsa-miR-661 1 0 0
chr11:66263660|66263952 hsa-miR-663a 1 0 0
chr11:66263660|66263952 hsa-miR-665 1 0 0
chr11:66263660|66263952 hsa-miR-760 1 0 0
chr11:66263660|66263952 hsa-miR-3176 1 0 0
chr11:66263660|66263952 hsa-miR-3197 1 0 0
chr11:66263660|66263952 hsa-miR-3610 1 0 0
chr11:66263660|66263952 hsa-miR-3909 1 0 0
chr11:66263660|66263952 hsa-miR-3945 1 0 0
chr11:66263660|66263952 hsa-miR-4490 1 0 0
chr11:66263660|66263952 hsa-miR-4533 1 0 0
chr11:66263660|66263952 hsa-miR-4656 1 0 0
chr11:66263660|66263952 hsa-miR-4688 1 0 0
chr11:66263660|66263952 hsa-miR-4739 1 0 0
chr11:66263660|66263952 hsa-miR-4767 1 0 0
chr11:66263660|66263952 hsa-miR-5194 1 0 0
chr11:66263660|66263952 hsa-miR-5691 1 0 0
chr11:66263660|66263952 hsa-miR-5787 1 0 0
chr11:66263660|66263952 hsa-miR-7150 1 0 0
chr11:66263660|66263952 hsa-miR-7974 1 0 0
chr11:66263660|66263952 hsa-miR-8074 1 0 0
chr11:66263660|66263952 hsa-miR-6799-5p 1 0 0
chr11:66263660|66263952 hsa-miR-4695-5p 1 0 0
chr11:66263660|66263952 hsa-miR-4722-5p 1 0 0
chr11:66263660|66263952 hsa-miR-3622b-5p 1 0 0
chr11:66263660|66263952 hsa-miR-3187-3p 1 0 0
chr11:66263660|66263952 hsa-miR-6732-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6798-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6881-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6735-3p 1 0 0
chr11:66263660|66263952 hsa-miR-1908-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6771-5p 1 0 0
chr11:66263660|66263952 hsa-miR-4690-5p 1 0 0
chr11:66263660|66263952 hsa-miR-3191-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6749-5p 1 0 0
chr11:66263660|66263952 hsa-miR-4787-5p 1 0 0
chr11:66263660|66263952 hsa-miR-149-3p 1 0 0
chr11:66263660|66263952 hsa-miR-937-5p 1 0 0
chr11:66263660|66263952 hsa-miR-328-3p 1 0 0
chr11:66263660|66263952 hsa-miR-6726-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6743-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6754-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6756-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6803-5p 1 0 0
chr11:66263660|66263952 hsa-miR-10401-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6879-5p 1 0 0
chr11:66263660|66263952 hsa-miR-5189-5p 1 0 0
chr11:66263660|66263952 hsa-miR-5196-5p 1 0 0
chr11:66263660|66263952 hsa-miR-10396b-5p 1 0 0
chr11:66263660|66263952 hsa-miR-10526-3p 1 0 0
chr11:66263660|66263952 hsa-miR-1237-5p 1 0 0
chr11:66263660|66263952 hsa-miR-1909-3p 1 0 0
chr11:66263660|66263952 hsa-miR-328-5p 1 0 0
chr11:66263660|66263952 hsa-miR-4649-5p 1 0 0
chr11:66263660|66263952 hsa-miR-4701-3p 1 0 0
chr11:66263660|66263952 hsa-miR-4745-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6729-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6738-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6794-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6846-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6848-5p 1 0 0
chr11:66263660|66263952 hsa-miR-6885-5p 1 0 0
chr11:66263660|66263952 hsa-miR-4758-5p 1 0 0
chr11:66263660|66263952 hsa-miR-1914-3p 1 0 0
chr11:66263660|66263952 hsa-miR-4756-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:66263660|66263952
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MEVGERKLLDSGPAGLWDLQGMGHSPHLPPNPHSRLGGPCPVFSPGWPEHH
Nucleotide Sequence CTGGAGGTGGGAGAACGGAAGCTTCTTGACTCAGGCCCTGCAGGACTCTGGGACCTGCAGGGGATGGGGCACAGCCCCCACCTCCCACCCAACCCTCACTCACGGCTGGGTGGTCCTTGCCCAGTGTTTTCTCCCGGATGGCCAGAGCATCATTGA
CircID chr11:66263660|66263952
ORF Type ORF2
Protein Length 89
Nucleotide Length 267
Protein Sequence MHNGSASLYLPLLPYRTARLFSVAATWRWENGSFLTQALQDSGTCRGWGTAPTSHPTLTHGWVVLAQCFLPDGQSIIEQVGSLLVLVLI
Nucleotide Sequence TTGCACAATGGCTCAGCCTCCTTGTACTTGCCCCTCTTGCCATACAGGACTGCCAGGTTGTTTAGTGTCGCAGCCACCTGGAGGTGGGAGAACGGAAGCTTCTTGACTCAGGCCCTGCAGGACTCTGGGACCTGCAGGGGATGGGGCACAGCCCCCACCTCCCACCCAACCCTCACTCACGGCTGGGTGGTCCTTGCCCAGTGTTTTCTCCCGGATGGCCAGAGCATCATTGAGCAGGTGGGCAGCCTCCTTGTACTTGTTCTGATC
CircID chr11:66263660|66263952
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MAQPPCTCPSCHTGLPGCLVSQPPGGGRTEAS
Nucleotide Sequence ATGGCTCAGCCTCCTTGTACTTGCCCCTCTTGCCATACAGGACTGCCAGGTTGTTTAGTGTCGCAGCCACCTGGAGGTGGGAGAACGGAAGCTTCTTGA
CircID chr11:66263660|66263952
ORF Type ORF4
Protein Length 46
Nucleotide Length 141
Protein Sequence MGPAGDGAQPPPPTQPSLTAGWSLPSVFSRMARASLSRWAASLYLF
Nucleotide Sequence CTGGGACCTGCAGGGGATGGGGCACAGCCCCCACCTCCCACCCAACCCTCACTCACGGCTGGGTGGTCCTTGCCCAGTGTTTTCTCCCGGATGGCCAGAGCATCATTGAGCAGGTGGGCAGCCTCCTTGTACTTGTTCTGA
CircID chr11:66263660|66263952
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MGGRWGLCPIPCRSQSPAGPESRSFRSPTSRWLRH
Nucleotide Sequence TTGGGTGGGAGGTGGGGGCTGTGCCCCATCCCCTGCAGGTCCCAGAGTCCTGCAGGGCCTGAGTCAAGAAGCTTCCGTTCTCCCACCTCCAGGTGGCTGCGACACTAA
CircID chr11:66263660|66263952
ORF Type ORF6
Protein Length 74
Nucleotide Length 225
Protein Sequence MLNDALAIREKTLGKDHPAVSEGWVGGGGCAPSPAGPRVLQGLSQEASVLPPPGGCDTKQPGSPVWQEGQVQGG
Nucleotide Sequence CTGCTCAATGATGCTCTGGCCATCCGGGAGAAAACACTGGGCAAGGACCACCCAGCCGTGAGTGAGGGTTGGGTGGGAGGTGGGGGCTGTGCCCCATCCCCTGCAGGTCCCAGAGTCCTGCAGGGCCTGAGTCAAGAAGCTTCCGTTCTCCCACCTCCAGGTGGCTGCGACACTAAACAACCTGGCAGTCCTGTATGGCAAGAGGGGCAAGTACAAGGAGGCTGA
CircID chr11:66263660|66263952
ORF Type ORF7
Protein Length 27
Nucleotide Length 81
Protein Sequence MAVLYGKRGKYKEAEPLCKRALEIREK
Nucleotide Sequence CTGGCAGTCCTGTATGGCAAGAGGGGCAAGTACAAGGAGGCTGAGCCATTGTGCAAGCGGGCACTGGAGATCCGGGAGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab