CircRNA Information

General Information
circRNA Basic Information
CircID chr11:66272175|66272460
Strand +
CircType exon
Host Gene ENSG00000174903.13;
Algorism CIRI2;
Sequence CTGGTCAGTGACGTCATACACCACGATGATGCCATGAGCCCCCCGGTAGTAGCTGGAAGTGATGGTCCGGAACCGTTCCTGGCCCGCTGTGTCCCACTAGGAGACAGTAGGCAGAGGAGCAGGTCAGCTGAGGTCCAGAGTCCCAGAGTCCCTTCCCTCCCAAGGTGGATACCTCTGTACTGGGGATTTTGGGAAGAGCGACACTCACGATCTGAAGTTTGATAGTTTTGCCATCCAGCTCGATGGTTCGGATCTTGAAGTCCACCCCGATGGTGCTGATGTAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:66272175|66272460 hsa-miR-29a-5p 0 0 1
chr11:66272175|66272460 hsa-miR-29a-3p 0 0 1
chr11:66272175|66272460 hsa-miR-221-5p 0 0 1
chr11:66272175|66272460 hsa-miR-221-3p 0 0 1
chr11:66272175|66272460 hsa-miR-222-5p 0 0 1
chr11:66272175|66272460 hsa-miR-222-3p 0 0 1
chr11:66272175|66272460 hsa-miR-29c-5p 0 0 1
chr11:66272175|66272460 hsa-miR-29c-3p 0 0 1
chr11:66272175|66272460 hsa-miR-326 0 0 1
chr11:66272175|66272460 hsa-miR-422a 0 1 1
chr11:66272175|66272460 hsa-miR-202-5p 0 0 1
chr11:66272175|66272460 hsa-miR-202-3p 0 0 1
chr11:66272175|66272460 hsa-miR-492 0 0 1
chr11:66272175|66272460 hsa-miR-605-5p 0 0 1
chr11:66272175|66272460 hsa-miR-605-3p 0 0 1
chr11:66272175|66272460 hsa-miR-608 0 0 1
chr11:66272175|66272460 hsa-miR-631 0 0 1
chr11:66272175|66272460 hsa-miR-1323 0 0 1
chr11:66272175|66272460 hsa-miR-873-5p 0 0 1
chr11:66272175|66272460 hsa-miR-873-3p 0 0 1
chr11:66272175|66272460 hsa-miR-1236-5p 0 0 1
chr11:66272175|66272460 hsa-miR-1236-3p 0 0 1
chr11:66272175|66272460 hsa-miR-1287-5p 0 0 1
chr11:66272175|66272460 hsa-miR-1287-3p 0 0 1
chr11:66272175|66272460 hsa-miR-548o-3p 0 0 1
chr11:66272175|66272460 hsa-miR-548o 0 0 1
chr11:66272175|66272460 hsa-miR-770-5p 0 1 1
chr11:66272175|66272460 hsa-miR-767-5p 0 0 1
chr11:66272175|66272460 hsa-miR-574-5p 0 0 1
chr11:66272175|66272460 hsa-miR-1207-3p 0 0 1
chr11:66272175|66272460 hsa-miR-330-5p 0 1 1
chr11:66272175|66272460 hsa-miR-1302 0 0 1
chr11:66272175|66272460 hsa-miR-378 0 0 1
chr11:66272175|66272460 hsa-miR-29b 0 0 1
chr11:66272175|66272460 hsa-miR-499-3p 0 0 1
chr11:66272175|66272460 hsa-miR-760 1 1 0
chr11:66272175|66272460 hsa-miR-1202 1 0 0
chr11:66272175|66272460 hsa-miR-4298 0 1 0
chr11:66272175|66272460 hsa-miR-4314 0 1 0
chr11:66272175|66272460 hsa-miR-3713 0 1 0
chr11:66272175|66272460 hsa-miR-4437 0 1 0
chr11:66272175|66272460 hsa-miR-4454 0 1 0
chr11:66272175|66272460 hsa-miR-3689c 0 1 0
chr11:66272175|66272460 hsa-miR-4498 1 0 0
chr11:66272175|66272460 hsa-miR-4535 0 1 0
chr11:66272175|66272460 hsa-miR-4642 0 1 0
chr11:66272175|66272460 hsa-miR-4658 0 1 0
chr11:66272175|66272460 hsa-miR-4788 1 0 0
chr11:66272175|66272460 hsa-miR-5690 0 1 0
chr11:66272175|66272460 hsa-miR-5705 1 0 0
chr11:66272175|66272460 hsa-miR-6745 0 1 0
chr11:66272175|66272460 hsa-miR-7978 0 1 0
chr11:66272175|66272460 hsa-miR-8058 0 1 0
chr11:66272175|66272460 hsa-miR-8063 0 1 0
chr11:66272175|66272460 hsa-miR-8075 1 0 0
chr11:66272175|66272460 hsa-miR-136-3p 0 1 0
chr11:66272175|66272460 hsa-miR-181c-3p 0 1 0
chr11:66272175|66272460 hsa-miR-6787-3p 1 1 0
chr11:66272175|66272460 hsa-miR-1292-5p 1 1 0
chr11:66272175|66272460 hsa-miR-6884-3p 0 1 0
chr11:66272175|66272460 hsa-miR-6772-3p 0 1 0
chr11:66272175|66272460 hsa-miR-7109-5p 0 1 0
chr11:66272175|66272460 hsa-miR-4640-5p 0 1 0
chr11:66272175|66272460 hsa-miR-5001-3p 0 1 0
chr11:66272175|66272460 hsa-miR-6780a-3p 0 1 0
chr11:66272175|66272460 hsa-miR-149-3p 1 1 0
chr11:66272175|66272460 hsa-miR-4757-3p 0 1 0
chr11:66272175|66272460 hsa-miR-3189-3p 0 1 0
chr11:66272175|66272460 hsa-miR-3619-3p 0 1 0
chr11:66272175|66272460 hsa-miR-4727-3p 0 1 0
chr11:66272175|66272460 hsa-miR-4750-5p 1 0 0
chr11:66272175|66272460 hsa-miR-2355-5p 0 1 0
chr11:66272175|66272460 hsa-miR-6508-3p 0 1 0
chr11:66272175|66272460 hsa-miR-6738-3p 0 1 0
chr11:66272175|66272460 hsa-miR-6812-3p 1 1 0
chr11:66272175|66272460 hsa-miR-3617-3p 0 1 0
chr11:66272175|66272460 hsa-miR-3689b-3p 0 1 0
chr11:66272175|66272460 hsa-miR-5001-5p 1 0 0
chr11:66272175|66272460 hsa-miR-6756-5p 1 0 0
chr11:66272175|66272460 hsa-miR-1249-5p 0 1 0
chr11:66272175|66272460 hsa-miR-6779-5p 0 1 0
chr11:66272175|66272460 hsa-miR-6780a-5p 0 1 0
chr11:66272175|66272460 hsa-miR-6797-5p 0 1 0
chr11:66272175|66272460 hsa-miR-4728-5p 0 1 0
chr11:66272175|66272460 hsa-miR-5196-5p 0 1 0
chr11:66272175|66272460 hsa-miR-6846-5p 0 1 0
chr11:66272175|66272460 hsa-miR-4697-5p 1 0 0
chr11:66272175|66272460 hsa-miR-1914-3p 1 0 0
chr11:66272175|66272460 hsa-miR-4747-5p 0 1 0
chr11:66272175|66272460 hsa-miR-6785-5p 0 1 0
chr11:66272175|66272460 hsa-miR-6790-5p 0 1 0
chr11:66272175|66272460 hsa-miR-5009-5p 0 1 0
chr11:66272175|66272460 hsa-miR-363-5p 0 1 0
chr11:66272175|66272460 hsa-miR-5195-3p 1 0 0
chr11:66272175|66272460 hsa-miR-3121-5p 0 1 0
chr11:66272175|66272460 hsa-miR-4712-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:66272175|66272460
ORF Type ORF1
Protein Length 73
Nucleotide Length 222
Protein Sequence LVSDVIHHDDAMSPPVVAGSDGPEPFLARCVPLGDSRQRSRSAEVQSPRVPSLPRWIPLYWGFWEERHSRSEV
Nucleotide Sequence CTGGTCAGTGACGTCATACACCACGATGATGCCATGAGCCCCCCGGTAGTAGCTGGAAGTGATGGTCCGGAACCGTTCCTGGCCCGCTGTGTCCCACTAGGAGACAGTAGGCAGAGGAGCAGGTCAGCTGAGGTCCAGAGTCCCAGAGTCCCTTCCCTCCCAAGGTGGATACCTCTGTACTGGGGATTTTGGGAAGAGCGACACTCACGATCTGAAGTTTGA
CircID chr11:66272175|66272460
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MRSRVPESLPSQGGYLCTGDFGKSDTHDLKFDSFAIQLDGSDLEVHPDGADVA
Nucleotide Sequence CTGAGGTCCAGAGTCCCAGAGTCCCTTCCCTCCCAAGGTGGATACCTCTGTACTGGGGATTTTGGGAAGAGCGACACTCACGATCTGAAGTTTGATAGTTTTGCCATCCAGCTCGATGGTTCGGATCTTGAAGTCCACCCCGATGGTGCTGATGTAGCT
CircID chr11:66272175|66272460
ORF Type ORF3
Protein Length 74
Nucleotide Length 225
Protein Sequence MDGKTIKLQIVSVALPKIPSTEVSTLGGKGLWDSGPQLTCSSAYCLLVGHSGPGTVPDHHFQLLPGGSWHHRGV
Nucleotide Sequence CTGGATGGCAAAACTATCAAACTTCAGATCGTGAGTGTCGCTCTTCCCAAAATCCCCAGTACAGAGGTATCCACCTTGGGAGGGAAGGGACTCTGGGACTCTGGACCTCAGCTGACCTGCTCCTCTGCCTACTGTCTCCTAGTGGGACACAGCGGGCCAGGAACGGTTCCGGACCATCACTTCCAGCTACTACCGGGGGGCTCATGGCATCATCGTGGTGTATGA
CircID chr11:66272175|66272460
ORF Type ORF4
Protein Length 48
Nucleotide Length 144
Protein Sequence MGLWTSADLLLCLLSPSGTQRARNGSGPSLPATTGGLMASSWCMTSLT
Nucleotide Sequence CTGGGACTCTGGACCTCAGCTGACCTGCTCCTCTGCCTACTGTCTCCTAGTGGGACACAGCGGGCCAGGAACGGTTCCGGACCATCACTTCCAGCTACTACCGGGGGGCTCATGGCATCATCGTGGTGTATGACGTCACTGACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab