CircRNA Information

General Information
circRNA Basic Information
CircID chr11:66287812|66288187
Strand -
CircType exon
Host Gene ENSG00000174851.13;
Algorism CIRI2;
Sequence CTGGTGTGTGTAGGGGAAGACCAGCAGCCCTAGCTTCTTGGCCACGTAGGCTGTGTCCACAGCAAAAAAATACTTGAGTTTGCTCACAGACACAAAACGGTGCAGCTGGGAGGGGAGAGAGGAAGCTGTGGGCAAGCCGCACCCCAGGCCTCAGGGTGCCCCTCTGTGTGCTCCATCCCTGAGGGCACTGTGAGGAATCGGGTGGAATCCCATGATGCCCCAGCCCTAGCCAAAAATTCTGCCACCCGTGCCCCGGGGGCAGGCCACACCTCCTTGTGCACCATGTCCTTCCCATGGGATGCGATGGAGCTGCCATAGGCCATAGCCACATTGGCCATTGGGTCCCCAAGCAAGTGGTTGACACTGAAGGCCACGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:66287812|66288187 hsa-miR-26b-5p 0 0 1
chr11:66287812|66288187 hsa-miR-26b-3p 0 0 1
chr11:66287812|66288187 hsa-miR-27a-5p 0 0 1
chr11:66287812|66288187 hsa-miR-27a-3p 0 0 1
chr11:66287812|66288187 hsa-miR-183-5p 0 0 1
chr11:66287812|66288187 hsa-miR-183-3p 0 0 1
chr11:66287812|66288187 hsa-miR-27b-5p 0 0 1
chr11:66287812|66288187 hsa-miR-27b-3p 0 0 1
chr11:66287812|66288187 hsa-miR-505-5p 0 0 1
chr11:66287812|66288187 hsa-miR-505-3p 0 0 1
chr11:66287812|66288187 hsa-miR-564 0 1 1
chr11:66287812|66288187 hsa-miR-592 0 0 1
chr11:66287812|66288187 hsa-miR-599 0 0 1
chr11:66287812|66288187 hsa-miR-603 0 0 1
chr11:66287812|66288187 hsa-miR-608 0 0 1
chr11:66287812|66288187 hsa-miR-661 0 1 1
chr11:66287812|66288187 hsa-miR-675-5p 0 0 1
chr11:66287812|66288187 hsa-miR-675-3p 0 0 1
chr11:66287812|66288187 hsa-miR-663b 0 0 1
chr11:66287812|66288187 hsa-miR-1204 0 1 1
chr11:66287812|66288187 hsa-miR-1297 0 0 1
chr11:66287812|66288187 hsa-miR-1266-5p 0 0 1
chr11:66287812|66288187 hsa-miR-1266-3p 0 0 1
chr11:66287812|66288187 hsa-miR-129-5p 0 0 1
chr11:66287812|66288187 hsa-miR-486-3p 0 0 1
chr11:66287812|66288187 hsa-miR-885-3p 0 0 1
chr11:66287812|66288187 hsa-miR-324-5p 1 1 1
chr11:66287812|66288187 hsa-miR-423-5p 0 0 1
chr11:66287812|66288187 hsa-miR-324-3p 0 0 1
chr11:66287812|66288187 hsa-miR-342-5p 0 0 1
chr11:66287812|66288187 hsa-miR-125a-5p 0 0 1
chr11:66287812|66288187 hsa-miR-516a-3p 0 0 1
chr11:66287812|66288187 hsa-miR-362-3p 0 0 1
chr11:66287812|66288187 hsa-miR-128 0 0 1
chr11:66287812|66288187 hsa-miR-125b 0 0 1
chr11:66287812|66288187 hsa-miR-1308 0 0 1
chr11:66287812|66288187 hsa-miR-644 0 0 1
chr11:66287812|66288187 hsa-miR-138 0 0 1
chr11:66287812|66288187 hsa-miR-26a 0 0 1
chr11:66287812|66288187 hsa-miR-329 0 0 1
chr11:66287812|66288187 hsa-miR-762 1 1 0
chr11:66287812|66288187 hsa-miR-4322 0 1 0
chr11:66287812|66288187 hsa-miR-4279 1 1 0
chr11:66287812|66288187 hsa-miR-4449 1 0 0
chr11:66287812|66288187 hsa-miR-4492 1 0 0
chr11:66287812|66288187 hsa-miR-4498 1 0 0
chr11:66287812|66288187 hsa-miR-4505 1 0 0
chr11:66287812|66288187 hsa-miR-4508 1 0 0
chr11:66287812|66288187 hsa-miR-4518 0 1 0
chr11:66287812|66288187 hsa-miR-1587 1 0 0
chr11:66287812|66288187 hsa-miR-4656 1 0 0
chr11:66287812|66288187 hsa-miR-4657 1 1 0
chr11:66287812|66288187 hsa-miR-4688 0 1 0
chr11:66287812|66288187 hsa-miR-4710 1 0 0
chr11:66287812|66288187 hsa-miR-4739 1 0 0
chr11:66287812|66288187 hsa-miR-4741 1 0 0
chr11:66287812|66288187 hsa-miR-5090 1 1 0
chr11:66287812|66288187 hsa-miR-5193 1 0 0
chr11:66287812|66288187 hsa-miR-5705 1 0 0
chr11:66287812|66288187 hsa-miR-5787 1 1 0
chr11:66287812|66288187 hsa-miR-6069 1 1 0
chr11:66287812|66288187 hsa-miR-6085 1 0 0
chr11:66287812|66288187 hsa-miR-8080 0 1 0
chr11:66287812|66288187 hsa-miR-12128 1 1 0
chr11:66287812|66288187 hsa-miR-6749-3p 1 0 0
chr11:66287812|66288187 hsa-miR-4747-3p 1 0 0
chr11:66287812|66288187 hsa-miR-132-5p 0 1 0
chr11:66287812|66288187 hsa-miR-4731-5p 0 1 0
chr11:66287812|66288187 hsa-miR-6892-3p 1 0 0
chr11:66287812|66288187 hsa-miR-6881-3p 1 1 0
chr11:66287812|66288187 hsa-miR-6728-5p 1 1 0
chr11:66287812|66288187 hsa-miR-3692-5p 0 1 0
chr11:66287812|66288187 hsa-miR-6089 1 0 0
chr11:66287812|66288187 hsa-miR-6757-5p 0 1 0
chr11:66287812|66288187 hsa-miR-7160-5p 0 1 0
chr11:66287812|66288187 hsa-miR-6820-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6840-5p 0 1 0
chr11:66287812|66288187 hsa-miR-6762-3p 1 1 0
chr11:66287812|66288187 hsa-miR-6727-5p 1 1 0
chr11:66287812|66288187 hsa-miR-4474-3p 0 1 0
chr11:66287812|66288187 hsa-miR-6721-5p 1 0 0
chr11:66287812|66288187 hsa-miR-7110-3p 1 1 0
chr11:66287812|66288187 hsa-miR-6845-3p 1 1 0
chr11:66287812|66288187 hsa-miR-7108-5p 0 1 0
chr11:66287812|66288187 hsa-miR-3151-5p 1 0 0
chr11:66287812|66288187 hsa-miR-1292-5p 1 0 0
chr11:66287812|66288187 hsa-miR-3180-3p 1 0 0
chr11:66287812|66288187 hsa-miR-877-3p 1 0 0
chr11:66287812|66288187 hsa-miR-185-3p 1 0 0
chr11:66287812|66288187 hsa-miR-6829-5p 0 1 0
chr11:66287812|66288187 hsa-miR-6782-5p 1 1 0
chr11:66287812|66288187 hsa-miR-6735-3p 1 1 0
chr11:66287812|66288187 hsa-miR-6882-3p 1 0 0
chr11:66287812|66288187 hsa-miR-4713-5p 1 0 0
chr11:66287812|66288187 hsa-miR-3944-3p 1 0 0
chr11:66287812|66288187 hsa-miR-1229-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6784-5p 1 1 0
chr11:66287812|66288187 hsa-miR-4640-5p 1 0 0
chr11:66287812|66288187 hsa-miR-3127-5p 1 0 0
chr11:66287812|66288187 hsa-miR-7113-3p 1 0 0
chr11:66287812|66288187 hsa-miR-296-3p 1 0 0
chr11:66287812|66288187 hsa-miR-6771-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6823-5p 1 0 0
chr11:66287812|66288187 hsa-miR-642b-5p 1 0 0
chr11:66287812|66288187 hsa-miR-7111-3p 1 1 0
chr11:66287812|66288187 hsa-miR-4787-5p 1 0 0
chr11:66287812|66288187 hsa-miR-4446-3p 1 1 0
chr11:66287812|66288187 hsa-miR-149-3p 1 0 0
chr11:66287812|66288187 hsa-miR-6736-3p 0 1 0
chr11:66287812|66288187 hsa-miR-6828-3p 1 0 0
chr11:66287812|66288187 hsa-miR-670-3p 0 1 0
chr11:66287812|66288187 hsa-miR-6871-3p 1 0 0
chr11:66287812|66288187 hsa-miR-216a-3p 0 1 0
chr11:66287812|66288187 hsa-miR-1296-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6826-3p 0 1 0
chr11:66287812|66288187 hsa-miR-4649-3p 1 1 0
chr11:66287812|66288187 hsa-miR-6802-3p 1 0 0
chr11:66287812|66288187 hsa-miR-1178-3p 0 1 0
chr11:66287812|66288187 hsa-miR-130b-5p 1 0 0
chr11:66287812|66288187 hsa-miR-1255b-2-3p 0 1 0
chr11:66287812|66288187 hsa-miR-371b-3p 0 1 0
chr11:66287812|66288187 hsa-miR-6800-3p 1 0 0
chr11:66287812|66288187 hsa-miR-513b-5p 0 1 0
chr11:66287812|66288187 hsa-miR-10400-5p 1 0 0
chr11:66287812|66288187 hsa-miR-4763-3p 1 0 0
chr11:66287812|66288187 hsa-miR-6816-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6865-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6775-5p 1 1 0
chr11:66287812|66288187 hsa-miR-6752-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6756-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6803-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6813-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6819-5p 1 0 0
chr11:66287812|66288187 hsa-miR-1249-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6751-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6779-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6879-5p 1 0 0
chr11:66287812|66288187 hsa-miR-7111-5p 1 0 0
chr11:66287812|66288187 hsa-miR-4685-3p 1 0 0
chr11:66287812|66288187 hsa-miR-3620-5p 1 0 0
chr11:66287812|66288187 hsa-miR-5189-5p 1 0 0
chr11:66287812|66288187 hsa-miR-5196-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6780b-5p 1 0 0
chr11:66287812|66288187 hsa-miR-1909-3p 1 0 0
chr11:66287812|66288187 hsa-miR-328-5p 1 0 0
chr11:66287812|66288187 hsa-miR-4685-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6729-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6846-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6848-5p 1 0 0
chr11:66287812|66288187 hsa-miR-6511a-5p 1 0 0
chr11:66287812|66288187 hsa-miR-3940-5p 1 0 0
chr11:66287812|66288187 hsa-miR-4747-5p 1 1 0
chr11:66287812|66288187 hsa-miR-6785-5p 1 0 0
chr11:66287812|66288187 hsa-miR-3689d 0 1 0
chr11:66287812|66288187 hsa-miR-6791-5p 1 1 0
chr11:66287812|66288187 hsa-miR-6756-3p 1 0 0
chr11:66287812|66288187 hsa-miR-6801-3p 1 0 0
chr11:66287812|66288187 hsa-miR-3059-5p 1 1 0
chr11:66287812|66288187 hsa-miR-3622a-3p 0 1 0
chr11:66287812|66288187 hsa-miR-4723-3p 1 1 0
chr11:66287812|66288187 hsa-miR-6769b-3p 1 1 0
chr11:66287812|66288187 hsa-miR-6781-3p 1 0 0
chr11:66287812|66288187 hsa-miR-6833-3p 1 1 0
chr11:66287812|66288187 hsa-miR-664a-5p 1 0 0
chr11:66287812|66288187 hsa-miR-9983-3p 0 1 0
chr11:66287812|66288187 hsa-miR-7162-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:66287812|66288187
ORF Type ORF1
Protein Length 70
Nucleotide Length 213
Protein Sequence MGGERGSCGQAAPQASGCPSVCSIPEGTVRNRVESHDAPALAKNSATRAPGAGHTSLCTMSFPWDAMELP
Nucleotide Sequence CTGGGAGGGGAGAGAGGAAGCTGTGGGCAAGCCGCACCCCAGGCCTCAGGGTGCCCCTCTGTGTGCTCCATCCCTGAGGGCACTGTGAGGAATCGGGTGGAATCCCATGATGCCCCAGCCCTAGCCAAAAATTCTGCCACCCGTGCCCCGGGGGCAGGCCACACCTCCTTGTGCACCATGTCCTTCCCATGGGATGCGATGGAGCTGCCATAG
CircID chr11:66287812|66288187
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MSLLTDTKRCSWEGREEAVGKPHPRPQGAPLCAPSLRAL
Nucleotide Sequence TTGAGTTTGCTCACAGACACAAAACGGTGCAGCTGGGAGGGGAGAGAGGAAGCTGTGGGCAAGCCGCACCCCAGGCCTCAGGGTGCCCCTCTGTGTGCTCCATCCCTGAGGGCACTGTGA
CircID chr11:66287812|66288187
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MPPVPRGQATPPCAPCPSHGMRWSCHRP
Nucleotide Sequence CTGCCACCCGTGCCCCGGGGGCAGGCCACACCTCCTTGTGCACCATGTCCTTCCCATGGGATGCGATGGAGCTGCCATAGGCCATAG
CircID chr11:66287812|66288187
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MGCDGAAIGHSHIGHWVPKQVVDTEGH
Nucleotide Sequence ATGGGATGCGATGGAGCTGCCATAGGCCATAGCCACATTGGCCATTGGGTCCCCAAGCAAGTGGTTGACACTGAAGGCCAC
CircID chr11:66287812|66288187
ORF Type ORF5
Protein Length 116
Nucleotide Length 348
Protein Sequence MGTQWPMWLWPMAAPSHPMGRTWCTRRCGLPPGHGWQNFWLGLGHHGIPPDSSQCPQGWSTQRGTLRPGVRLAHSFLSPLPAAPFCVCEQTQVFFCCGHSLRGQEARAAGLPLHTP
Nucleotide Sequence TTGGGGACCCAATGGCCAATGTGGCTATGGCCTATGGCAGCTCCATCGCATCCCATGGGAAGGACATGGTGCACAAGGAGGTGTGGCCTGCCCCCGGGGCACGGGTGGCAGAATTTTTGGCTAGGGCTGGGGCATCATGGGATTCCACCCGATTCCTCACAGTGCCCTCAGGGATGGAGCACACAGAGGGGCACCCTGAGGCCTGGGGTGCGGCTTGCCCACAGCTTCCTCTCTCCCCTCCCAGCTGCACCGTTTTGTGTCTGTGAGCAAACTCAAGTATTTTTTTGCTGTGGACACAGCCTACGTGGCCAAGAAGCTAGGGCTGCTGGTCTTCCCCTACACACACCA
CircID chr11:66287812|66288187
ORF Type ORF6
Protein Length 49
Nucleotide Length 147
Protein Sequence MGCGLPTASSLPSQLHRFVSVSKLKYFFAVDTAYVAKKLGLLVFPYTHQ
Nucleotide Sequence CTGGGGTGCGGCTTGCCCACAGCTTCCTCTCTCCCCTCCCAGCTGCACCGTTTTGTGTCTGTGAGCAAACTCAAGTATTTTTTTGCTGTGGACACAGCCTACGTGGCCAAGAAGCTAGGGCTGCTGGTCTTCCCCTACACACACCAG
CircID chr11:66287812|66288187
ORF Type ORF7
Protein Length 89
Nucleotide Length 270
Protein Sequence MLGDPMANVAMAYGSSIASHGKDMVHKEVWPAPGARVAEFLARAGASWDSTRFLTVPSGMEHTEGHPEAWGAACPQLPLSPPSCTVLCL
Nucleotide Sequence TTGCTTGGGGACCCAATGGCCAATGTGGCTATGGCCTATGGCAGCTCCATCGCATCCCATGGGAAGGACATGGTGCACAAGGAGGTGTGGCCTGCCCCCGGGGCACGGGTGGCAGAATTTTTGGCTAGGGCTGGGGCATCATGGGATTCCACCCGATTCCTCACAGTGCCCTCAGGGATGGAGCACACAGAGGGGCACCCTGAGGCCTGGGGTGCGGCTTGCCCACAGCTTCCTCTCTCCCCTCCCAGCTGCACCGTTTTGTGTCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab