CircRNA Information

General Information
circRNA Basic Information
CircID chr11:66365382|66365564
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTGCCTCTCCCAGGCTCCAGCTTGTGCTCTCCACCGCATCTACAGTTTACGTACTCGGTTCCTCAGAGCACCCACTGGTGGTTCCACAGACCCCCTTGGGGGCAGATGGGGTTTCTGAGTGGGATTGGAAGCTGTAGATCAGCTCCTGTCCTGACTTGGATGAGACCAGCTCCTCTTTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:66365382|66365564 hsa-miR-185-5p 0 0 1
chr11:66365382|66365564 hsa-miR-185-3p 0 0 1
chr11:66365382|66365564 hsa-miR-583 0 1 1
chr11:66365382|66365564 hsa-miR-661 0 0 1
chr11:66365382|66365564 hsa-miR-708-5p 0 0 1
chr11:66365382|66365564 hsa-miR-708-3p 0 0 1
chr11:66365382|66365564 hsa-miR-1183 1 1 1
chr11:66365382|66365564 hsa-miR-548g-5p 0 0 1
chr11:66365382|66365564 hsa-miR-548g-3p 0 0 1
chr11:66365382|66365564 hsa-miR-1827 0 0 1
chr11:66365382|66365564 hsa-miR-139-5p 0 0 1
chr11:66365382|66365564 hsa-miR-28-5p 0 0 1
chr11:66365382|66365564 hsa-miR-324-3p 0 0 1
chr11:66365382|66365564 hsa-miR-3137 1 0 0
chr11:66365382|66365564 hsa-miR-3139 0 1 0
chr11:66365382|66365564 hsa-miR-4300 0 1 0
chr11:66365382|66365564 hsa-miR-4429 1 0 0
chr11:66365382|66365564 hsa-miR-4436a 0 1 0
chr11:66365382|66365564 hsa-miR-3135b 1 1 0
chr11:66365382|66365564 hsa-miR-4523 1 0 0
chr11:66365382|66365564 hsa-miR-4537 1 0 0
chr11:66365382|66365564 hsa-miR-4648 0 1 0
chr11:66365382|66365564 hsa-miR-4682 1 0 0
chr11:66365382|66365564 hsa-miR-5691 0 1 0
chr11:66365382|66365564 hsa-miR-7706 1 0 0
chr11:66365382|66365564 hsa-miR-8089 1 0 0
chr11:66365382|66365564 hsa-miR-12119 0 1 0
chr11:66365382|66365564 hsa-miR-7114-5p 0 1 0
chr11:66365382|66365564 hsa-miR-6880-5p 0 1 0
chr11:66365382|66365564 hsa-miR-6741-5p 1 1 0
chr11:66365382|66365564 hsa-miR-6721-5p 0 1 0
chr11:66365382|66365564 hsa-miR-3189-5p 1 1 0
chr11:66365382|66365564 hsa-miR-6748-5p 0 1 0
chr11:66365382|66365564 hsa-miR-6786-5p 1 0 0
chr11:66365382|66365564 hsa-miR-1226-5p 1 0 0
chr11:66365382|66365564 hsa-miR-194-3p 0 1 0
chr11:66365382|66365564 hsa-miR-423-5p 0 1 0
chr11:66365382|66365564 hsa-miR-6882-5p 0 1 0
chr11:66365382|66365564 hsa-miR-4766-5p 0 1 0
chr11:66365382|66365564 hsa-miR-3156-3p 0 1 0
chr11:66365382|66365564 hsa-miR-6769b-5p 1 0 0
chr11:66365382|66365564 hsa-miR-5001-5p 1 0 0
chr11:66365382|66365564 hsa-miR-6726-5p 1 1 0
chr11:66365382|66365564 hsa-miR-6752-5p 1 0 0
chr11:66365382|66365564 hsa-miR-6813-5p 0 1 0
chr11:66365382|66365564 hsa-miR-6819-5p 1 0 0
chr11:66365382|66365564 hsa-miR-6842-5p 1 0 0
chr11:66365382|66365564 hsa-miR-939-5p 1 1 0
chr11:66365382|66365564 hsa-miR-30c-1-3p 0 1 0
chr11:66365382|66365564 hsa-miR-6731-5p 0 1 0
chr11:66365382|66365564 hsa-miR-6771-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:66365382|66365564
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence LPLPGSSLCSPPHLQFTYSVPQSTHWWFHRPPWGQMGFLSGIGSCRSAPVLTWMRPAPLS
Nucleotide Sequence CTGCCTCTCCCAGGCTCCAGCTTGTGCTCTCCACCGCATCTACAGTTTACGTACTCGGTTCCTCAGAGCACCCACTGGTGGTTCCACAGACCCCCTTGGGGGCAGATGGGGTTTCTGAGTGGGATTGGAAGCTGTAGATCAGCTCCTGTCCTGACTTGGATGAGACCAGCTCCTCTTTCA

CircID chr11:66365382|66365564
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MVSSKSGQELIYSFQSHSETPSAPKGVCGTTSGCSEEPST
Nucleotide Sequence CTGGTCTCATCCAAGTCAGGACAGGAGCTGATCTACAGCTTCCAATCCCACTCAGAAACCCCATCTGCCCCCAAGGGGGTCTGTGGAACCACCAGTGGGTGCTCTGAGGAACCGAGTACGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites