CircRNA Information

General Information
circRNA Basic Information
CircID chr11:66495394|66495727
Strand -
CircType exon
Host Gene ENSG00000254986.6;
Algorism CIRI2;
Sequence CTGGGATAGCAAGTTCAGCACCATCGCCTCCAGCTACGAAGAGTGCCGGGCTGAGAGCGTGGGTCTCTACCTCTGTCTCCACCCGCAAGTGCTGGAGTAAGAGCAGCAGGGCCGAGGGGCGGGCTGTCCCGCTGCAGTGGCCAGCCCTGGGGGCGTGGAGGGTGGGTGGTAGTGGCCAGTGGGATGGGGACAGGGCAGCCTCTGACCATCCTGCCACCTGCCTGCCCCTCTCACAGGATCTTTGGCTTTGAGGGGGCTGATGCGGAGGACGTGATCTACGTGAACTGGCTCAACATGGTTCGGGCCGGGCTGCTCGCTCTGGAGTTCTACACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:66495394|66495727 hsa-let-7b-5p 0 0 1
chr11:66495394|66495727 hsa-let-7b-3p 0 0 1
chr11:66495394|66495727 hsa-let-7c-5p 0 0 1
chr11:66495394|66495727 hsa-let-7c-3p 0 0 1
chr11:66495394|66495727 hsa-let-7d-5p 0 0 1
chr11:66495394|66495727 hsa-let-7d-3p 0 0 1
chr11:66495394|66495727 hsa-let-7e-5p 0 0 1
chr11:66495394|66495727 hsa-let-7e-3p 0 0 1
chr11:66495394|66495727 hsa-miR-98-5p 0 0 1
chr11:66495394|66495727 hsa-miR-98-3p 0 0 1
chr11:66495394|66495727 hsa-let-7g-5p 0 0 1
chr11:66495394|66495727 hsa-let-7g-3p 0 0 1
chr11:66495394|66495727 hsa-let-7i-5p 0 0 1
chr11:66495394|66495727 hsa-let-7i-3p 0 0 1
chr11:66495394|66495727 hsa-miR-370-5p 0 0 1
chr11:66495394|66495727 hsa-miR-370-3p 0 0 1
chr11:66495394|66495727 hsa-miR-193b-5p 0 0 1
chr11:66495394|66495727 hsa-miR-193b-3p 0 0 1
chr11:66495394|66495727 hsa-miR-575 0 0 1
chr11:66495394|66495727 hsa-miR-588 0 0 1
chr11:66495394|66495727 hsa-miR-650 1 0 1
chr11:66495394|66495727 hsa-miR-766-5p 0 0 1
chr11:66495394|66495727 hsa-miR-766-3p 0 0 1
chr11:66495394|66495727 hsa-miR-874-5p 0 0 1
chr11:66495394|66495727 hsa-miR-874-3p 0 0 1
chr11:66495394|66495727 hsa-miR-940 0 0 1
chr11:66495394|66495727 hsa-miR-1291 1 1 1
chr11:66495394|66495727 hsa-miR-1277-5p 0 0 1
chr11:66495394|66495727 hsa-miR-1277-3p 0 0 1
chr11:66495394|66495727 hsa-miR-486-3p 0 1 1
chr11:66495394|66495727 hsa-miR-485-5p 0 0 1
chr11:66495394|66495727 hsa-miR-146b-3p 0 0 1
chr11:66495394|66495727 hsa-miR-339-5p 0 1 1
chr11:66495394|66495727 hsa-miR-1184 0 0 1
chr11:66495394|66495727 hsa-miR-423-5p 0 1 1
chr11:66495394|66495727 hsa-miR-525-5p 0 1 1
chr11:66495394|66495727 hsa-miR-330-3p 0 0 1
chr11:66495394|66495727 hsa-miR-508-5p 0 1 1
chr11:66495394|66495727 hsa-miR-361-3p 0 1 1
chr11:66495394|66495727 hsa-miR-338-3p 0 0 1
chr11:66495394|66495727 hsa-miR-1207-5p 0 0 1
chr11:66495394|66495727 hsa-miR-520a-5p 0 0 1
chr11:66495394|66495727 hsa-miR-509-3-5p 0 1 1
chr11:66495394|66495727 hsa-miR-509-5p 0 0 1
chr11:66495394|66495727 hsa-miR-193a-3p 0 1 1
chr11:66495394|66495727 hsa-let-7a 0 0 1
chr11:66495394|66495727 hsa-let-7f 0 0 1
chr11:66495394|66495727 hsa-miR-886-3p 0 0 1
chr11:66495394|66495727 hsa-miR-608 1 0 0
chr11:66495394|66495727 hsa-miR-620 0 1 0
chr11:66495394|66495727 hsa-miR-662 0 1 0
chr11:66495394|66495727 hsa-miR-1913 1 1 0
chr11:66495394|66495727 hsa-miR-1193 0 1 0
chr11:66495394|66495727 hsa-miR-4312 0 1 0
chr11:66495394|66495727 hsa-miR-4313 0 1 0
chr11:66495394|66495727 hsa-miR-4257 0 1 0
chr11:66495394|66495727 hsa-miR-3615 1 1 0
chr11:66495394|66495727 hsa-miR-3651 1 0 0
chr11:66495394|66495727 hsa-miR-3665 0 1 0
chr11:66495394|66495727 hsa-miR-3943 0 1 0
chr11:66495394|66495727 hsa-miR-4443 0 1 0
chr11:66495394|66495727 hsa-miR-3135b 0 1 0
chr11:66495394|66495727 hsa-miR-4492 0 1 0
chr11:66495394|66495727 hsa-miR-4498 0 1 0
chr11:66495394|66495727 hsa-miR-2392 0 1 0
chr11:66495394|66495727 hsa-miR-4518 0 1 0
chr11:66495394|66495727 hsa-miR-4539 0 1 0
chr11:66495394|66495727 hsa-miR-4688 0 1 0
chr11:66495394|66495727 hsa-miR-4692 0 1 0
chr11:66495394|66495727 hsa-miR-5092 0 1 0
chr11:66495394|66495727 hsa-miR-6134 0 1 0
chr11:66495394|66495727 hsa-miR-6745 0 1 0
chr11:66495394|66495727 hsa-miR-7150 0 1 0
chr11:66495394|66495727 hsa-miR-18a-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6734-5p 0 1 0
chr11:66495394|66495727 hsa-miR-3194-3p 1 1 0
chr11:66495394|66495727 hsa-miR-212-5p 1 0 0
chr11:66495394|66495727 hsa-miR-6807-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6880-5p 0 1 0
chr11:66495394|66495727 hsa-miR-7847-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6806-5p 0 1 0
chr11:66495394|66495727 hsa-miR-8069 0 1 0
chr11:66495394|66495727 hsa-miR-3189-5p 1 0 0
chr11:66495394|66495727 hsa-miR-4711-5p 0 1 0
chr11:66495394|66495727 hsa-miR-939-3p 1 0 0
chr11:66495394|66495727 hsa-miR-4763-5p 1 0 0
chr11:66495394|66495727 hsa-miR-7108-3p 0 1 0
chr11:66495394|66495727 hsa-miR-1247-5p 0 1 0
chr11:66495394|66495727 hsa-miR-4707-3p 1 1 0
chr11:66495394|66495727 hsa-miR-3944-3p 1 0 0
chr11:66495394|66495727 hsa-miR-6757-3p 0 1 0
chr11:66495394|66495727 hsa-miR-4446-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6769a-3p 1 0 0
chr11:66495394|66495727 hsa-miR-3190-5p 0 1 0
chr11:66495394|66495727 hsa-miR-3922-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6743-3p 1 0 0
chr11:66495394|66495727 hsa-miR-6801-5p 0 1 0
chr11:66495394|66495727 hsa-miR-3940-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6865-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6856-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6886-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6795-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6777-3p 1 1 0
chr11:66495394|66495727 hsa-miR-6883-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6748-3p 0 1 0
chr11:66495394|66495727 hsa-miR-4717-5p 0 1 0
chr11:66495394|66495727 hsa-miR-3173-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6779-3p 1 1 0
chr11:66495394|66495727 hsa-miR-6750-3p 1 0 0
chr11:66495394|66495727 hsa-miR-6509-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6865-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6893-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6775-5p 0 1 0
chr11:66495394|66495727 hsa-miR-5001-5p 1 1 0
chr11:66495394|66495727 hsa-miR-6743-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6756-5p 1 1 0
chr11:66495394|66495727 hsa-miR-6815-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6780a-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6808-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6879-5p 0 1 0
chr11:66495394|66495727 hsa-miR-1915-3p 1 1 0
chr11:66495394|66495727 hsa-miR-328-5p 0 1 0
chr11:66495394|66495727 hsa-miR-4685-5p 1 1 0
chr11:66495394|66495727 hsa-miR-6758-5p 0 1 0
chr11:66495394|66495727 hsa-miR-324-3p 1 1 0
chr11:66495394|66495727 hsa-miR-6893-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6805-3p 1 1 0
chr11:66495394|66495727 hsa-miR-6810-3p 0 1 0
chr11:66495394|66495727 hsa-miR-6837-5p 0 1 0
chr11:66495394|66495727 hsa-miR-6775-3p 1 1 0
chr11:66495394|66495727 hsa-miR-10392-3p 1 0 0
chr11:66495394|66495727 hsa-miR-7114-3p 0 1 0
chr11:66495394|66495727 hsa-miR-4701-5p 1 1 0
chr11:66495394|66495727 hsa-miR-6764-5p 0 1 0
chr11:66495394|66495727 hsa-miR-10393-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:66495394|66495727
ORF Type ORF1
Protein Length 87
Nucleotide Length 261
Protein Sequence MSPPASAGVRAAGPRGGLSRCSGQPWGRGGWVVVASGMGTGQPLTILPPACPSHRIFGFEGADAEDVIYVNWLNMVRAGLLALEFYT
Nucleotide Sequence CTGTCTCCACCCGCAAGTGCTGGAGTAAGAGCAGCAGGGCCGAGGGGCGGGCTGTCCCGCTGCAGTGGCCAGCCCTGGGGGCGTGGAGGGTGGGTGGTAGTGGCCAGTGGGATGGGGACAGGGCAGCCTCTGACCATCCTGCCACCTGCCTGCCCCTCTCACAGGATCTTTGGCTTTGAGGGGGCTGATGCGGAGGACGTGATCTACGTGAACTGGCTCAACATGGTTCGGGCCGGGCTGCTCGCTCTGGAGTTCTACACA
CircID chr11:66495394|66495727
ORF Type ORF2
Protein Length 66
Nucleotide Length 201
Protein Sequence MRAWVSTSVSTRKCWSKSSRAEGRAVPLQWPALGAWRVGGSGQWDGDRAASDHPATCLPLSQDLWL
Nucleotide Sequence CTGAGAGCGTGGGTCTCTACCTCTGTCTCCACCCGCAAGTGCTGGAGTAAGAGCAGCAGGGCCGAGGGGCGGGCTGTCCCGCTGCAGTGGCCAGCCCTGGGGGCGTGGAGGGTGGGTGGTAGTGGCCAGTGGGATGGGGACAGGGCAGCCTCTGACCATCCTGCCACCTGCCTGCCCCTCTCACAGGATCTTTGGCTTTGA
CircID chr11:66495394|66495727
ORF Type ORF3
Protein Length 64
Nucleotide Length 192
Protein Sequence MSPSHWPLPPTLHAPRAGHCSGTARPSALLLLLQHLRVETEVETHALSPALFVAGGDGAELAIP
Nucleotide Sequence CTGTCCCCATCCCACTGGCCACTACCACCCACCCTCCACGCCCCCAGGGCTGGCCACTGCAGCGGGACAGCCCGCCCCTCGGCCCTGCTGCTCTTACTCCAGCACTTGCGGGTGGAGACAGAGGTAGAGACCCACGCTCTCAGCCCGGCACTCTTCGTAGCTGGAGGCGATGGTGCTGAACTTGCTATCCCA
CircID chr11:66495394|66495727
ORF Type ORF4
Protein Length 43
Nucleotide Length 132
Protein Sequence MPCPHPTGHYHPPSTPPGLATAAGQPAPRPCCSYSSTCGWRQR
Nucleotide Sequence CTGCCCTGTCCCCATCCCACTGGCCACTACCACCCACCCTCCACGCCCCCAGGGCTGGCCACTGCAGCGGGACAGCCCGCCCCTCGGCCCTGCTGCTCTTACTCCAGCACTTGCGGGTGGAGACAGAGGTAG
CircID chr11:66495394|66495727
ORF Type ORF5
Protein Length 64
Nucleotide Length 195
Protein Sequence MVRGCPVPIPLATTTHPPRPQGWPLQRDSPPLGPAALTPALAGGDRGRDPRSQPGTLRSWRRWC
Nucleotide Sequence ATGGTCAGAGGCTGCCCTGTCCCCATCCCACTGGCCACTACCACCCACCCTCCACGCCCCCAGGGCTGGCCACTGCAGCGGGACAGCCCGCCCCTCGGCCCTGCTGCTCTTACTCCAGCACTTGCGGGTGGAGACAGAGGTAGAGACCCACGCTCTCAGCCCGGCACTCTTCGTAGCTGGAGGCGATGGTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab