CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67281976|67282117
Strand +
CircType exon
Host Gene ENSG00000173020.9;
Algorism CIRI2;
Sequence CTGGACCCAGAGAGTGGCTCGGTGGGAAGGGCAGGGGCGGAGATGGGAAGATACGGGGCGGCCATGTCCCAGGAGCCCCACTCCTCTGGGCCTGGTGGCCGGGATGTCGAGAGGAAGGAGAGGACAGCCACGGAGGTCCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67281976|67282117 hsa-miR-326 0 0 1
chr11:67281976|67282117 hsa-miR-492 0 0 1
chr11:67281976|67282117 hsa-miR-938 0 0 1
chr11:67281976|67282117 hsa-miR-615-3p 0 0 1
chr11:67281976|67282117 hsa-miR-1224-3p 0 0 1
chr11:67281976|67282117 hsa-miR-188-3p 0 0 1
chr11:67281976|67282117 hsa-miR-330-5p 0 0 1
chr11:67281976|67282117 hsa-miR-1302 0 0 1
chr11:67281976|67282117 hsa-miR-1260 0 0 1
chr11:67281976|67282117 hsa-miR-1280 0 0 1
chr11:67281976|67282117 hsa-miR-647 1 0 0
chr11:67281976|67282117 hsa-miR-1181 1 0 0
chr11:67281976|67282117 hsa-miR-1260a 1 1 0
chr11:67281976|67282117 hsa-miR-1913 1 0 0
chr11:67281976|67282117 hsa-miR-1976 1 1 0
chr11:67281976|67282117 hsa-miR-718 1 0 0
chr11:67281976|67282117 hsa-miR-1260b 0 1 0
chr11:67281976|67282117 hsa-miR-4481 0 1 0
chr11:67281976|67282117 hsa-miR-4741 1 0 0
chr11:67281976|67282117 hsa-miR-7974 1 0 0
chr11:67281976|67282117 hsa-miR-9901 1 0 0
chr11:67281976|67282117 hsa-miR-4433b-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6749-3p 1 0 0
chr11:67281976|67282117 hsa-miR-132-5p 0 1 0
chr11:67281976|67282117 hsa-miR-4433a-3p 0 1 0
chr11:67281976|67282117 hsa-miR-210-5p 1 1 0
chr11:67281976|67282117 hsa-miR-4474-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6842-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6817-3p 0 1 0
chr11:67281976|67282117 hsa-miR-1915-5p 1 0 0
chr11:67281976|67282117 hsa-miR-6845-3p 1 1 0
chr11:67281976|67282117 hsa-miR-3151-5p 0 1 0
chr11:67281976|67282117 hsa-miR-4725-5p 1 0 0
chr11:67281976|67282117 hsa-miR-877-3p 1 0 0
chr11:67281976|67282117 hsa-miR-23a-5p 0 1 0
chr11:67281976|67282117 hsa-miR-1343-3p 0 1 0
chr11:67281976|67282117 hsa-miR-4763-5p 1 0 0
chr11:67281976|67282117 hsa-miR-1247-5p 1 0 0
chr11:67281976|67282117 hsa-miR-1908-3p 1 0 0
chr11:67281976|67282117 hsa-miR-3667-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6847-5p 0 1 0
chr11:67281976|67282117 hsa-miR-7111-3p 1 1 0
chr11:67281976|67282117 hsa-miR-4638-3p 1 0 0
chr11:67281976|67282117 hsa-miR-5196-3p 1 0 0
chr11:67281976|67282117 hsa-miR-4733-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6786-3p 1 0 0
chr11:67281976|67282117 hsa-miR-339-5p 1 0 0
chr11:67281976|67282117 hsa-miR-6743-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6889-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6785-3p 1 0 0
chr11:67281976|67282117 hsa-miR-3605-3p 1 1 0
chr11:67281976|67282117 hsa-miR-4632-3p 1 1 0
chr11:67281976|67282117 hsa-miR-6826-3p 1 0 0
chr11:67281976|67282117 hsa-miR-1914-5p 1 0 0
chr11:67281976|67282117 hsa-miR-6886-3p 0 1 0
chr11:67281976|67282117 hsa-miR-5088-3p 0 1 0
chr11:67281976|67282117 hsa-miR-328-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6777-3p 0 1 0
chr11:67281976|67282117 hsa-miR-1296-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6779-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6734-3p 0 1 0
chr11:67281976|67282117 hsa-miR-942-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6800-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6852-3p 0 1 0
chr11:67281976|67282117 hsa-miR-4745-5p 1 1 0
chr11:67281976|67282117 hsa-miR-10396a-3p 1 0 0
chr11:67281976|67282117 hsa-miR-10396b-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6877-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6801-3p 1 1 0
chr11:67281976|67282117 hsa-miR-6810-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6775-3p 1 0 0
chr11:67281976|67282117 hsa-miR-10392-3p 1 0 0
chr11:67281976|67282117 hsa-miR-3059-5p 1 1 0
chr11:67281976|67282117 hsa-miR-4723-3p 1 1 0
chr11:67281976|67282117 hsa-miR-6751-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6819-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6891-3p 1 0 0
chr11:67281976|67282117 hsa-miR-6783-3p 0 1 0
chr11:67281976|67282117 hsa-miR-6876-3p 1 1 0
chr11:67281976|67282117 hsa-miR-6827-3p 1 0 0
chr11:67281976|67282117 hsa-miR-494-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:67281976|67282117
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence LDPESGSVGRAGAEMGRYGAAMSQEPHSSGPGGRDVERKERTATEVQ
Nucleotide Sequence CTGGACCCAGAGAGTGGCTCGGTGGGAAGGGCAGGGGCGGAGATGGGAAGATACGGGGCGGCCATGTCCCAGGAGCCCCACTCCTCTGGGCCTGGTGGCCGGGATGTCGAGAGGAAGGAGAGGACAGCCACGGAGGTCCAG
CircID chr11:67281976|67282117
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MSSPSSRHPGHQAQRSGAPGTWPPRIFPSPPLPFPPSHSLGP
Nucleotide Sequence CTGTCCTCTCCTTCCTCTCGACATCCCGGCCACCAGGCCCAGAGGAGTGGGGCTCCTGGGACATGGCCGCCCCGTATCTTCCCATCTCCGCCCCTGCCCTTCCCACCGAGCCACTCTCTGGGTCCA
CircID chr11:67281976|67282117
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence LDLRGCPLLPLDIPATRPRGVGLLGHGRPVSSHLRPCPSHRATLWVQ
Nucleotide Sequence CTGGACCTCCGTGGCTGTCCTCTCCTTCCTCTCGACATCCCGGCCACCAGGCCCAGAGGAGTGGGGCTCCTGGGACATGGCCGCCCCGTATCTTCCCATCTCCGCCCCTGCCCTTCCCACCGAGCCACTCTCTGGGTCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab