CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67286073|67286204
Strand +
CircType exon
Host Gene ENSG00000173020.9;
Algorism CIRI2;
Sequence CCAGCCCAGCATCAGCGAGACCTCAGGCCAGGCGAGGCCAGTATGGCCCAACCTGCAGGTGCCTTGCTGTGGTCCCTGAGCCCGGGTGCTGGGGGTTGGGGCAAGAGGGGACAGCAGGGAGGGTAGCAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67286073|67286204 hsa-miR-370-5p 0 0 1
chr11:67286073|67286204 hsa-miR-370-3p 0 0 1
chr11:67286073|67286204 hsa-miR-193b-5p 0 0 1
chr11:67286073|67286204 hsa-miR-193b-3p 0 0 1
chr11:67286073|67286204 hsa-miR-506-5p 0 0 1
chr11:67286073|67286204 hsa-miR-506-3p 0 0 1
chr11:67286073|67286204 hsa-miR-626 0 0 1
chr11:67286073|67286204 hsa-miR-657 0 0 1
chr11:67286073|67286204 hsa-miR-892b 0 0 1
chr11:67286073|67286204 hsa-miR-1205 0 1 1
chr11:67286073|67286204 hsa-miR-1266-5p 0 0 1
chr11:67286073|67286204 hsa-miR-1266-3p 0 0 1
chr11:67286073|67286204 hsa-miR-361-3p 0 0 1
chr11:67286073|67286204 hsa-miR-140-3p 0 0 1
chr11:67286073|67286204 hsa-miR-193a-3p 0 0 1
chr11:67286073|67286204 hsa-miR-124 0 0 1
chr11:67286073|67286204 hsa-miR-720 0 0 1
chr11:67286073|67286204 hsa-miR-24 0 0 1
chr11:67286073|67286204 hsa-miR-1976 1 0 0
chr11:67286073|67286204 hsa-miR-544b 0 1 0
chr11:67286073|67286204 hsa-miR-3176 0 1 0
chr11:67286073|67286204 hsa-miR-4437 1 1 0
chr11:67286073|67286204 hsa-miR-4518 0 1 0
chr11:67286073|67286204 hsa-miR-4656 1 0 0
chr11:67286073|67286204 hsa-miR-4674 1 0 0
chr11:67286073|67286204 hsa-miR-12128 0 1 0
chr11:67286073|67286204 hsa-miR-211-3p 0 1 0
chr11:67286073|67286204 hsa-miR-15a-3p 0 1 0
chr11:67286073|67286204 hsa-miR-210-5p 1 0 0
chr11:67286073|67286204 hsa-miR-187-5p 1 0 0
chr11:67286073|67286204 hsa-miR-24-3p 0 1 0
chr11:67286073|67286204 hsa-miR-770-5p 0 1 0
chr11:67286073|67286204 hsa-miR-3189-5p 1 0 0
chr11:67286073|67286204 hsa-miR-1915-5p 1 0 0
chr11:67286073|67286204 hsa-miR-6845-3p 1 0 0
chr11:67286073|67286204 hsa-miR-3934-3p 0 1 0
chr11:67286073|67286204 hsa-miR-5088-5p 1 1 0
chr11:67286073|67286204 hsa-miR-7113-3p 1 1 0
chr11:67286073|67286204 hsa-miR-7111-3p 1 1 0
chr11:67286073|67286204 hsa-miR-4667-3p 1 1 0
chr11:67286073|67286204 hsa-miR-3120-3p 0 1 0
chr11:67286073|67286204 hsa-miR-1237-3p 1 0 0
chr11:67286073|67286204 hsa-miR-7106-3p 1 0 0
chr11:67286073|67286204 hsa-miR-4687-5p 1 0 0
chr11:67286073|67286204 hsa-miR-6793-3p 1 1 0
chr11:67286073|67286204 hsa-miR-6871-3p 0 1 0
chr11:67286073|67286204 hsa-miR-4632-3p 1 0 0
chr11:67286073|67286204 hsa-miR-7848-3p 0 1 0
chr11:67286073|67286204 hsa-miR-6508-3p 0 1 0
chr11:67286073|67286204 hsa-miR-6826-3p 0 1 0
chr11:67286073|67286204 hsa-miR-4749-3p 0 1 0
chr11:67286073|67286204 hsa-miR-4433a-5p 1 0 0
chr11:67286073|67286204 hsa-miR-3173-5p 1 0 0
chr11:67286073|67286204 hsa-miR-4433b-5p 1 0 0
chr11:67286073|67286204 hsa-miR-6734-3p 0 1 0
chr11:67286073|67286204 hsa-miR-4685-5p 1 0 0
chr11:67286073|67286204 hsa-miR-6724-5p 1 0 0
chr11:67286073|67286204 hsa-miR-6893-3p 1 1 0
chr11:67286073|67286204 hsa-miR-6810-3p 1 1 0
chr11:67286073|67286204 hsa-miR-4723-3p 1 1 0
chr11:67286073|67286204 hsa-miR-4769-3p 1 0 0
chr11:67286073|67286204 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:67286073|67286204
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MAQPAGALLWSLSPGAGGWGKRGQQGG
Nucleotide Sequence ATGGCCCAACCTGCAGGTGCCTTGCTGTGGTCCCTGAGCCCGGGTGCTGGGGGTTGGGGCAAGAGGGGACAGCAGGGAGGGTAG

CircID chr11:67286073|67286204
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MLPSLLSPLAPTPSTRAQGPQQGTCRLGHTGLAWPEVSLMLGW
Nucleotide Sequence CTGCTACCCTCCCTGCTGTCCCCTCTTGCCCCAACCCCCAGCACCCGGGCTCAGGGACCACAGCAAGGCACCTGCAGGTTGGGCCATACTGGCCTCGCCTGGCCTGAGGTCTCGCTGATGCTGGGCTGG

CircID chr11:67286073|67286204
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MPQPPAPGLRDHSKAPAGWAILASPGLRSR
Nucleotide Sequence TTGCCCCAACCCCCAGCACCCGGGCTCAGGGACCACAGCAAGGCACCTGCAGGTTGGGCCATACTGGCCTCGCCTGGCCTGAGGTCTCGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites