CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67310088|67310264
Strand +
CircType exon
Host Gene ENSG00000172830.11;
Algorism CIRI2;
Sequence CCCTCGGAGGTTTATACGTGGCCGTGGCCCAGGCTCTTCTTTCGGGGCTGCCTGGCTCTCTTCCATGCCTACAACCTTCTCCTCCCCACCACCCTCAGGTTCTGGCGGAAGAGGTGGGAATGGTGTAGAGACTTCAGGGGCTGGGTGCTCCTCTGGGGAGACCCCACCCACTTTCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67310088|67310264 hsa-miR-661 0 1 1
chr11:67310088|67310264 hsa-miR-765 0 1 1
chr11:67310088|67310264 hsa-miR-541-5p 0 0 1
chr11:67310088|67310264 hsa-miR-541-3p 0 0 1
chr11:67310088|67310264 hsa-miR-939-5p 0 0 1
chr11:67310088|67310264 hsa-miR-939-3p 0 0 1
chr11:67310088|67310264 hsa-miR-1236-5p 0 0 1
chr11:67310088|67310264 hsa-miR-1236-3p 0 0 1
chr11:67310088|67310264 hsa-miR-1293 0 1 1
chr11:67310088|67310264 hsa-miR-491-5p 0 0 1
chr11:67310088|67310264 hsa-miR-615-5p 0 0 1
chr11:67310088|67310264 hsa-miR-654-5p 0 0 1
chr11:67310088|67310264 hsa-miR-1224-3p 0 1 1
chr11:67310088|67310264 hsa-miR-188-3p 0 0 1
chr11:67310088|67310264 hsa-miR-1260 0 0 1
chr11:67310088|67310264 hsa-miR-1280 0 0 1
chr11:67310088|67310264 hsa-miR-7 0 0 1
chr11:67310088|67310264 hsa-miR-1260a 0 1 0
chr11:67310088|67310264 hsa-miR-1268a 1 0 0
chr11:67310088|67310264 hsa-miR-544b 0 1 0
chr11:67310088|67310264 hsa-miR-1260b 0 1 0
chr11:67310088|67310264 hsa-miR-4308 0 1 0
chr11:67310088|67310264 hsa-miR-4254 0 1 0
chr11:67310088|67310264 hsa-miR-1268b 1 0 0
chr11:67310088|67310264 hsa-miR-4673 0 1 0
chr11:67310088|67310264 hsa-miR-4739 1 0 0
chr11:67310088|67310264 hsa-miR-6077 0 1 0
chr11:67310088|67310264 hsa-miR-92a-2-5p 0 1 0
chr11:67310088|67310264 hsa-miR-512-5p 0 1 0
chr11:67310088|67310264 hsa-miR-7106-5p 0 1 0
chr11:67310088|67310264 hsa-miR-6894-5p 1 0 0
chr11:67310088|67310264 hsa-miR-6804-5p 0 1 0
chr11:67310088|67310264 hsa-miR-6880-5p 1 0 0
chr11:67310088|67310264 hsa-miR-6746-5p 1 0 0
chr11:67310088|67310264 hsa-miR-505-5p 0 1 0
chr11:67310088|67310264 hsa-miR-4755-3p 0 1 0
chr11:67310088|67310264 hsa-miR-3622b-5p 0 1 0
chr11:67310088|67310264 hsa-miR-6806-5p 1 1 0
chr11:67310088|67310264 hsa-miR-6748-5p 0 1 0
chr11:67310088|67310264 hsa-miR-3190-3p 0 1 0
chr11:67310088|67310264 hsa-miR-3150b-3p 0 1 0
chr11:67310088|67310264 hsa-miR-345-3p 0 1 0
chr11:67310088|67310264 hsa-miR-6786-5p 0 1 0
chr11:67310088|67310264 hsa-miR-1226-5p 1 0 0
chr11:67310088|67310264 hsa-miR-185-5p 0 1 0
chr11:67310088|67310264 hsa-miR-6771-5p 1 0 0
chr11:67310088|67310264 hsa-miR-5197-3p 0 1 0
chr11:67310088|67310264 hsa-miR-3184-3p 0 1 0
chr11:67310088|67310264 hsa-miR-6731-3p 0 1 0
chr11:67310088|67310264 hsa-miR-6743-5p 1 0 0
chr11:67310088|67310264 hsa-miR-6752-5p 1 0 0
chr11:67310088|67310264 hsa-miR-6756-5p 1 1 0
chr11:67310088|67310264 hsa-miR-6803-5p 1 1 0
chr11:67310088|67310264 hsa-miR-7110-5p 1 1 0
chr11:67310088|67310264 hsa-miR-11181-3p 1 1 0
chr11:67310088|67310264 hsa-miR-5196-5p 1 0 0
chr11:67310088|67310264 hsa-miR-6780b-5p 1 1 0
chr11:67310088|67310264 hsa-miR-4726-5p 1 0 0
chr11:67310088|67310264 hsa-miR-4667-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:67310088|67310264
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MALFHAYNLLLPTTLRFWRKRWEWCRDFRGWVLLWGDPTHFL
Nucleotide Sequence CTGGCTCTCTTCCATGCCTACAACCTTCTCCTCCCCACCACCCTCAGGTTCTGGCGGAAGAGGTGGGAATGGTGTAGAGACTTCAGGGGCTGGGTGCTCCTCTGGGGAGACCCCACCCACTTTCTG

CircID chr11:67310088|67310264
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MPTTFSSPPPSGSGGRGGNGVETSGAGCSSGETPPTF
Nucleotide Sequence ATGCCTACAACCTTCTCCTCCCCACCACCCTCAGGTTCTGGCGGAAGAGGTGGGAATGGTGTAGAGACTTCAGGGGCTGGGTGCTCCTCTGGGGAGACCCCACCCACTTTC

CircID chr11:67310088|67310264
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MPGSLPCLQPSPPHHPQVLAEEVGMV
Nucleotide Sequence CTGCCTGGCTCTCTTCCATGCCTACAACCTTCTCCTCCCCACCACCCTCAGGTTCTGGCGGAAGAGGTGGGAATGGTGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites