CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67352741|67353072
Strand -
CircType exon
Host Gene ENSG00000175482.7;
Algorism CIRI2;
Sequence CTCTGGGGGAGGCTCCAAGCCCATCTGCTTGGCCCGACACCAGCGCTGCAGCCGTGTGATCCCTGCCAGGGTGGGAAGAAGACTCTGGAGACTTGTGGGGGGTGGGGTAGAGTCTGAGCTGGAGAATGTGTGTGTTGGGGGGAGACAGTTCCTGAGGGTCAGAGTCACGCAAGCGCTTGGGTGACTTCAGAGACGTGTGGGTGACTGGCTGGGAGAGGCGCCTCCGTGGGGCTGGGTGGGTTCTCACCGGTGCAGGGCCCGTACTGCCAGGCCAGGTCAAACTGCCTCAGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTGGGGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67352741|67353072 hsa-miR-192-5p 0 0 1
chr11:67352741|67353072 hsa-miR-192-3p 0 0 1
chr11:67352741|67353072 hsa-miR-34a-5p 0 0 1
chr11:67352741|67353072 hsa-miR-34a-3p 0 0 1
chr11:67352741|67353072 hsa-miR-215-5p 0 0 1
chr11:67352741|67353072 hsa-miR-215-3p 0 0 1
chr11:67352741|67353072 hsa-miR-224-5p 0 0 1
chr11:67352741|67353072 hsa-miR-224-3p 0 0 1
chr11:67352741|67353072 hsa-miR-146a-5p 0 0 1
chr11:67352741|67353072 hsa-miR-146a-3p 0 0 1
chr11:67352741|67353072 hsa-miR-150-5p 0 0 1
chr11:67352741|67353072 hsa-miR-150-3p 0 0 1
chr11:67352741|67353072 hsa-miR-449a 0 0 1
chr11:67352741|67353072 hsa-miR-432-5p 0 0 1
chr11:67352741|67353072 hsa-miR-432-3p 0 0 1
chr11:67352741|67353072 hsa-miR-518e-5p 0 0 1
chr11:67352741|67353072 hsa-miR-518e-3p 0 0 1
chr11:67352741|67353072 hsa-miR-504-5p 0 0 1
chr11:67352741|67353072 hsa-miR-504-3p 0 0 1
chr11:67352741|67353072 hsa-miR-558 0 0 1
chr11:67352741|67353072 hsa-miR-575 0 0 1
chr11:67352741|67353072 hsa-miR-589-5p 0 0 1
chr11:67352741|67353072 hsa-miR-589-3p 0 0 1
chr11:67352741|67353072 hsa-miR-593-5p 0 0 1
chr11:67352741|67353072 hsa-miR-593-3p 0 0 1
chr11:67352741|67353072 hsa-miR-631 0 1 1
chr11:67352741|67353072 hsa-miR-449b-5p 0 0 1
chr11:67352741|67353072 hsa-miR-449b-3p 0 0 1
chr11:67352741|67353072 hsa-miR-766-5p 0 0 1
chr11:67352741|67353072 hsa-miR-766-3p 0 0 1
chr11:67352741|67353072 hsa-miR-873-5p 0 0 1
chr11:67352741|67353072 hsa-miR-873-3p 0 0 1
chr11:67352741|67353072 hsa-miR-924 0 0 1
chr11:67352741|67353072 hsa-miR-1291 0 1 1
chr11:67352741|67353072 hsa-miR-1827 0 0 1
chr11:67352741|67353072 hsa-miR-1225-3p 0 1 1
chr11:67352741|67353072 hsa-miR-532-3p 1 0 1
chr11:67352741|67353072 hsa-miR-1184 0 1 1
chr11:67352741|67353072 hsa-miR-525-5p 0 0 1
chr11:67352741|67353072 hsa-miR-566 0 0 1
chr11:67352741|67353072 hsa-miR-361-3p 0 0 1
chr11:67352741|67353072 hsa-miR-1224-3p 0 0 1
chr11:67352741|67353072 hsa-miR-188-3p 1 0 1
chr11:67352741|67353072 hsa-miR-1207-5p 1 0 1
chr11:67352741|67353072 hsa-miR-520a-5p 0 0 1
chr11:67352741|67353072 hsa-miR-34c-5p 0 0 1
chr11:67352741|67353072 hsa-miR-146b-5p 0 0 1
chr11:67352741|67353072 hsa-miR-515-5p 0 0 1
chr11:67352741|67353072 hsa-miR-151-5p 0 0 1
chr11:67352741|67353072 hsa-miR-1260 0 0 1
chr11:67352741|67353072 hsa-miR-1280 0 0 1
chr11:67352741|67353072 hsa-miR-138 0 0 1
chr11:67352741|67353072 hsa-miR-346 1 0 0
chr11:67352741|67353072 hsa-miR-484 1 1 0
chr11:67352741|67353072 hsa-miR-638 1 0 0
chr11:67352741|67353072 hsa-miR-920 0 1 0
chr11:67352741|67353072 hsa-miR-1260a 0 1 0
chr11:67352741|67353072 hsa-miR-1913 1 0 0
chr11:67352741|67353072 hsa-miR-2861 1 0 0
chr11:67352741|67353072 hsa-miR-1260b 0 1 0
chr11:67352741|67353072 hsa-miR-3176 0 1 0
chr11:67352741|67353072 hsa-miR-3183 0 1 0
chr11:67352741|67353072 hsa-miR-4323 0 1 0
chr11:67352741|67353072 hsa-miR-4279 1 0 0
chr11:67352741|67353072 hsa-miR-3937 1 0 0
chr11:67352741|67353072 hsa-miR-378g 0 1 0
chr11:67352741|67353072 hsa-miR-3135b 0 1 0
chr11:67352741|67353072 hsa-miR-4469 1 0 0
chr11:67352741|67353072 hsa-miR-4522 0 1 0
chr11:67352741|67353072 hsa-miR-4706 0 1 0
chr11:67352741|67353072 hsa-miR-5787 1 0 0
chr11:67352741|67353072 hsa-miR-6081 1 0 0
chr11:67352741|67353072 hsa-miR-7977 0 1 0
chr11:67352741|67353072 hsa-miR-8073 0 1 0
chr11:67352741|67353072 hsa-miR-9899 1 0 0
chr11:67352741|67353072 hsa-miR-11401 0 1 0
chr11:67352741|67353072 hsa-miR-12115 0 1 0
chr11:67352741|67353072 hsa-miR-138-5p 0 1 0
chr11:67352741|67353072 hsa-miR-125b-2-3p 0 1 0
chr11:67352741|67353072 hsa-miR-6749-3p 1 0 0
chr11:67352741|67353072 hsa-miR-93-3p 0 1 0
chr11:67352741|67353072 hsa-miR-92a-1-5p 1 0 0
chr11:67352741|67353072 hsa-miR-500b-3p 0 1 0
chr11:67352741|67353072 hsa-miR-6879-3p 0 1 0
chr11:67352741|67353072 hsa-miR-6765-5p 1 0 0
chr11:67352741|67353072 hsa-miR-6836-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6720-5p 1 1 0
chr11:67352741|67353072 hsa-miR-27a-5p 1 0 0
chr11:67352741|67353072 hsa-miR-6854-5p 0 1 0
chr11:67352741|67353072 hsa-miR-7160-5p 1 0 0
chr11:67352741|67353072 hsa-miR-874-5p 1 0 0
chr11:67352741|67353072 hsa-miR-6875-3p 1 1 0
chr11:67352741|67353072 hsa-miR-6727-5p 1 0 0
chr11:67352741|67353072 hsa-miR-7110-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6845-3p 1 0 0
chr11:67352741|67353072 hsa-miR-3130-3p 0 1 0
chr11:67352741|67353072 hsa-miR-6765-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6874-5p 0 1 0
chr11:67352741|67353072 hsa-miR-7855-5p 0 1 0
chr11:67352741|67353072 hsa-miR-6882-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6740-3p 0 1 0
chr11:67352741|67353072 hsa-miR-4713-5p 1 1 0
chr11:67352741|67353072 hsa-miR-6763-3p 1 0 0
chr11:67352741|67353072 hsa-miR-1908-5p 1 0 0
chr11:67352741|67353072 hsa-miR-7113-3p 1 0 0
chr11:67352741|67353072 hsa-miR-3679-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6749-5p 1 0 0
chr11:67352741|67353072 hsa-miR-6818-3p 1 0 0
chr11:67352741|67353072 hsa-miR-7846-3p 0 1 0
chr11:67352741|67353072 hsa-miR-4707-5p 1 0 0
chr11:67352741|67353072 hsa-miR-1236-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6889-3p 1 0 0
chr11:67352741|67353072 hsa-miR-3180-5p 1 0 0
chr11:67352741|67353072 hsa-miR-4758-3p 1 0 0
chr11:67352741|67353072 hsa-miR-4778-3p 0 1 0
chr11:67352741|67353072 hsa-miR-6867-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6887-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6793-3p 1 0 0
chr11:67352741|67353072 hsa-miR-1180-5p 0 1 0
chr11:67352741|67353072 hsa-miR-6895-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6868-5p 0 1 0
chr11:67352741|67353072 hsa-miR-6826-3p 1 0 0
chr11:67352741|67353072 hsa-miR-4749-3p 1 0 0
chr11:67352741|67353072 hsa-miR-328-3p 1 0 0
chr11:67352741|67353072 hsa-miR-1229-3p 1 0 0
chr11:67352741|67353072 hsa-miR-4750-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6798-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6729-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6800-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6750-3p 1 0 0
chr11:67352741|67353072 hsa-miR-3162-3p 1 0 0
chr11:67352741|67353072 hsa-miR-4787-3p 1 0 0
chr11:67352741|67353072 hsa-miR-4714-5p 0 1 0
chr11:67352741|67353072 hsa-miR-885-5p 1 0 0
chr11:67352741|67353072 hsa-miR-4763-3p 1 1 0
chr11:67352741|67353072 hsa-miR-6787-5p 1 0 0
chr11:67352741|67353072 hsa-miR-6743-5p 1 0 0
chr11:67352741|67353072 hsa-miR-6722-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6774-5p 1 0 0
chr11:67352741|67353072 hsa-miR-1909-3p 1 0 0
chr11:67352741|67353072 hsa-miR-449c-5p 0 1 0
chr11:67352741|67353072 hsa-miR-4649-5p 1 0 0
chr11:67352741|67353072 hsa-miR-4726-5p 1 0 0
chr11:67352741|67353072 hsa-miR-10396a-3p 0 1 0
chr11:67352741|67353072 hsa-miR-10396b-3p 0 1 0
chr11:67352741|67353072 hsa-miR-6799-3p 1 1 0
chr11:67352741|67353072 hsa-miR-6753-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6784-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6862-3p 1 1 0
chr11:67352741|67353072 hsa-miR-323b-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6511b-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6751-3p 1 0 0
chr11:67352741|67353072 hsa-miR-6823-3p 0 1 0
chr11:67352741|67353072 hsa-miR-7114-3p 1 1 0
chr11:67352741|67353072 hsa-miR-6876-3p 1 0 0
chr11:67352741|67353072 hsa-miR-4676-3p 1 0 0
chr11:67352741|67353072 hsa-miR-4659b-3p 0 1 0
chr11:67352741|67353072 hsa-miR-1250-3p 0 1 0
chr11:67352741|67353072 hsa-miR-301a-5p 0 1 0
chr11:67352741|67353072 hsa-miR-3927-5p 1 0 0
chr11:67352741|67353072 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:67352741|67353072
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MLGPTPALQPCDPCQGGKKTLETCGGWGRV
Nucleotide Sequence CTGCTTGGCCCGACACCAGCGCTGCAGCCGTGTGATCCCTGCCAGGGTGGGAAGAAGACTCTGGAGACTTGTGGGGGGTGGGGTAGAGTCTGA
CircID chr11:67352741|67353072
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MAGRGASVGLGGFSPVQGPYCQARSNCLSSSSSASSSSRGWG
Nucleotide Sequence CTGGCTGGGAGAGGCGCCTCCGTGGGGCTGGGTGGGTTCTCACCGGTGCAGGGCCCGTACTGCCAGGCCAGGTCAAACTGCCTCAGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTGGGGC
CircID chr11:67352741|67353072
ORF Type ORF3
Protein Length 51
Nucleotide Length 156
Protein Sequence MARHQRCSRVIPARVGRRLWRLVGGGVESELENVCVGGRQFLRVRVTQALG
Nucleotide Sequence TTGGCCCGACACCAGCGCTGCAGCCGTGTGATCCCTGCCAGGGTGGGAAGAAGACTCTGGAGACTTGTGGGGGGTGGGGTAGAGTCTGAGCTGGAGAATGTGTGTGTTGGGGGGAGACAGTTCCTGAGGGTCAGAGTCACGCAAGCGCTTGGGTGA
CircID chr11:67352741|67353072
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MGEAPPWGWVGSHRCRARTARPGQTASAAPAPLPPRRGAGA
Nucleotide Sequence CTGGGAGAGGCGCCTCCGTGGGGCTGGGTGGGTTCTCACCGGTGCAGGGCCCGTACTGCCAGGCCAGGTCAAACTGCCTCAGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTGGGGCT
CircID chr11:67352741|67353072
ORF Type ORF5
Protein Length 52
Nucleotide Length 156
Protein Sequence MGDFRDVWVTGWERRLRGAGWVLTGAGPVLPGQVKLPQQLQLRFLLVAGLGL
Nucleotide Sequence TTGGGTGACTTCAGAGACGTGTGGGTGACTGGCTGGGAGAGGCGCCTCCGTGGGGCTGGGTGGGTTCTCACCGGTGCAGGGCCCGTACTGCCAGGCCAGGTCAAACTGCCTCAGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTGGGGCTC
CircID chr11:67352741|67353072
ORF Type ORF6
Protein Length 44
Nucleotide Length 135
Protein Sequence MELLRQFDLAWQYGPCTGENPPSPTEAPLPASHPHVSEVTQALA
Nucleotide Sequence CTGGAGCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCACCGGTGAGAACCCACCCAGCCCCACGGAGGCGCCTCTCCCAGCCAGTCACCCACACGTCTCTGAAGTCACCCAAGCGCTTGCGTGA
CircID chr11:67352741|67353072
ORF Type ORF7
Protein Length 93
Nucleotide Length 279
Protein Sequence MTWPGSTGPAPVRTHPAPRRRLSQPVTHTSLKSPKRLRDSDPQELSPPNTHILQLRLYPTPHKSPESSSHPGRDHTAAALVSGQADGLGASPR
Nucleotide Sequence TTGACCTGGCCTGGCAGTACGGGCCCTGCACCGGTGAGAACCCACCCAGCCCCACGGAGGCGCCTCTCCCAGCCAGTCACCCACACGTCTCTGAAGTCACCCAAGCGCTTGCGTGACTCTGACCCTCAGGAACTGTCTCCCCCCAACACACACATTCTCCAGCTCAGACTCTACCCCACCCCCCACAAGTCTCCAGAGTCTTCTTCCCACCCTGGCAGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCCTCCCCCAGA
CircID chr11:67352741|67353072
ORF Type ORF8
Protein Length 54
Nucleotide Length 162
Protein Sequence MTLRNCLPPTHTFSSSDSTPPPTSLQSLLPTLAGITRLQRWCRAKQMGLEPPPE
Nucleotide Sequence CTGACCCTCAGGAACTGTCTCCCCCCAACACACACATTCTCCAGCTCAGACTCTACCCCACCCCCCACAAGTCTCCAGAGTCTTCTTCCCACCCTGGCAGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCCTCCCCCAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab