CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67399021|67399131
Strand -
CircType exon
Host Gene ENSG00000172531.13;
Algorism CIRI2;
Sequence GCCACGGTCGTTCTCGCCCCAGCCCTGCACGTCCTTGTCAGGGTCAGACCACAGCAGGTCACACAGCAGGCCCTGGTCAGGCACATCTGTGGGCCGCATGATCCGCCGAAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67399021|67399131 hsa-miR-370-5p 0 0 1
chr11:67399021|67399131 hsa-miR-370-3p 0 0 1
chr11:67399021|67399131 hsa-miR-504-5p 0 0 1
chr11:67399021|67399131 hsa-miR-504-3p 0 0 1
chr11:67399021|67399131 hsa-miR-631 0 0 1
chr11:67399021|67399131 hsa-miR-576-3p 0 0 1
chr11:67399021|67399131 hsa-miR-455-5p 0 0 1
chr11:67399021|67399131 hsa-miR-550 0 0 1
chr11:67399021|67399131 hsa-miR-1201 0 0 1
chr11:67399021|67399131 hsa-miR-663a 1 0 0
chr11:67399021|67399131 hsa-miR-762 1 1 0
chr11:67399021|67399131 hsa-miR-663b 0 1 0
chr11:67399021|67399131 hsa-miR-1291 0 1 0
chr11:67399021|67399131 hsa-miR-1268a 1 0 0
chr11:67399021|67399131 hsa-miR-1538 1 0 0
chr11:67399021|67399131 hsa-miR-2861 0 1 0
chr11:67399021|67399131 hsa-miR-4256 0 1 0
chr11:67399021|67399131 hsa-miR-3621 1 0 0
chr11:67399021|67399131 hsa-miR-1268b 1 0 0
chr11:67399021|67399131 hsa-miR-3135b 1 0 0
chr11:67399021|67399131 hsa-miR-4462 1 0 0
chr11:67399021|67399131 hsa-miR-4492 0 1 0
chr11:67399021|67399131 hsa-miR-4505 0 1 0
chr11:67399021|67399131 hsa-miR-4508 1 0 0
chr11:67399021|67399131 hsa-miR-4512 0 1 0
chr11:67399021|67399131 hsa-miR-4526 1 0 0
chr11:67399021|67399131 hsa-miR-4730 1 0 0
chr11:67399021|67399131 hsa-miR-4752 1 0 0
chr11:67399021|67399131 hsa-miR-5787 0 1 0
chr11:67399021|67399131 hsa-miR-6085 1 0 0
chr11:67399021|67399131 hsa-miR-6132 1 1 0
chr11:67399021|67399131 hsa-miR-8089 1 0 0
chr11:67399021|67399131 hsa-miR-25-5p 1 0 0
chr11:67399021|67399131 hsa-miR-6799-5p 1 0 0
chr11:67399021|67399131 hsa-miR-4633-5p 1 0 0
chr11:67399021|67399131 hsa-miR-6784-5p 1 0 0
chr11:67399021|67399131 hsa-miR-6753-5p 1 0 0
chr11:67399021|67399131 hsa-miR-4446-3p 0 1 0
chr11:67399021|67399131 hsa-miR-550b-2-5p 0 1 0
chr11:67399021|67399131 hsa-miR-744-5p 1 0 0
chr11:67399021|67399131 hsa-miR-6722-3p 1 0 0
chr11:67399021|67399131 hsa-miR-3620-5p 1 0 0
chr11:67399021|67399131 hsa-miR-6836-5p 1 1 0
chr11:67399021|67399131 hsa-miR-4685-5p 1 1 0
chr11:67399021|67399131 hsa-miR-6729-5p 0 1 0
chr11:67399021|67399131 hsa-miR-6848-5p 1 0 0
chr11:67399021|67399131 hsa-miR-10394-3p 1 0 0
chr11:67399021|67399131 hsa-miR-3940-5p 1 0 0
chr11:67399021|67399131 hsa-miR-1271-3p 1 1 0
chr11:67399021|67399131 hsa-miR-4700-5p 1 0 0
chr11:67399021|67399131 hsa-miR-6893-3p 0 1 0
chr11:67399021|67399131 hsa-miR-6837-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:67399021|67399131
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MHVLVRVRPQQVTQQALVRHICGPHDPPN
Nucleotide Sequence CTGCACGTCCTTGTCAGGGTCAGACCACAGCAGGTCACACAGCAGGCCCTGGTCAGGCACATCTGTGGGCCGCATGATCCGCCGAAT

CircID chr11:67399021|67399131
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MSGSDHSRSHSRPWSGTSVGRMIRR
Nucleotide Sequence TTGTCAGGGTCAGACCACAGCAGGTCACACAGCAGGCCCTGGTCAGGCACATCTGTGGGCCGCATGATCCGCCGA

CircID chr11:67399021|67399131
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRG
Nucleotide Sequence ATGCGGCCCACAGATGTGCCTGACCAGGGCCTGCTGTGTGACCTGCTGTGGTCTGACCCTGACAAGGACGTGCAGGGCTGGGGCGAGAACGACCGTGGC

CircID chr11:67399021|67399131
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MCLTRACCVTCCGLTLTRTCRAGARTTV
Nucleotide Sequence ATGTGCCTGACCAGGGCCTGCTGTGTGACCTGCTGTGGTCTGACCCTGACAAGGACGTGCAGGGCTGGGGCGAGAACGACCGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites