CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67400796|67400910
Strand +
CircType exon
Host Gene ENSG00000172531.13;
Algorism CIRI2;
Sequence ACGGCCAGTACTACGACCTTCTGCGACTATTTGAGTATGGCGGTTTCCCTCCCGAGAGCAACTACCTCTTTCTGGGGGACTATGTGGACAGGGGCAAGCAGTCCTTGGAGACCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67400796|67400910 hsa-let-7b-5p 0 0 1
chr11:67400796|67400910 hsa-let-7b-3p 0 0 1
chr11:67400796|67400910 hsa-let-7c-5p 0 0 1
chr11:67400796|67400910 hsa-let-7c-3p 0 0 1
chr11:67400796|67400910 hsa-let-7d-5p 0 0 1
chr11:67400796|67400910 hsa-let-7d-3p 0 0 1
chr11:67400796|67400910 hsa-let-7e-5p 0 0 1
chr11:67400796|67400910 hsa-let-7e-3p 0 0 1
chr11:67400796|67400910 hsa-miR-98-5p 0 0 1
chr11:67400796|67400910 hsa-miR-98-3p 0 0 1
chr11:67400796|67400910 hsa-let-7g-5p 0 0 1
chr11:67400796|67400910 hsa-let-7g-3p 0 0 1
chr11:67400796|67400910 hsa-let-7i-5p 0 0 1
chr11:67400796|67400910 hsa-let-7i-3p 0 0 1
chr11:67400796|67400910 hsa-miR-196b-5p 0 0 1
chr11:67400796|67400910 hsa-miR-196b-3p 0 0 1
chr11:67400796|67400910 hsa-miR-493-5p 0 0 1
chr11:67400796|67400910 hsa-miR-493-3p 0 0 1
chr11:67400796|67400910 hsa-miR-193b-5p 0 0 1
chr11:67400796|67400910 hsa-miR-193b-3p 0 0 1
chr11:67400796|67400910 hsa-miR-583 0 0 1
chr11:67400796|67400910 hsa-miR-298 0 0 1
chr11:67400796|67400910 hsa-miR-888-5p 0 0 1
chr11:67400796|67400910 hsa-miR-888-3p 0 0 1
chr11:67400796|67400910 hsa-miR-892b 0 0 1
chr11:67400796|67400910 hsa-miR-1278 0 0 1
chr11:67400796|67400910 hsa-miR-1288-5p 0 0 1
chr11:67400796|67400910 hsa-miR-1288-3p 0 0 1
chr11:67400796|67400910 hsa-miR-339-5p 0 1 1
chr11:67400796|67400910 hsa-miR-361-3p 0 0 1
chr11:67400796|67400910 hsa-miR-193a-3p 0 0 1
chr11:67400796|67400910 hsa-miR-515-5p 0 0 1
chr11:67400796|67400910 hsa-let-7a 0 0 1
chr11:67400796|67400910 hsa-let-7f 0 0 1
chr11:67400796|67400910 hsa-miR-196a 0 0 1
chr11:67400796|67400910 hsa-miR-943 1 0 0
chr11:67400796|67400910 hsa-miR-3169 0 1 0
chr11:67400796|67400910 hsa-miR-210-5p 0 1 0
chr11:67400796|67400910 hsa-miR-6762-3p 1 1 0
chr11:67400796|67400910 hsa-miR-6771-5p 0 1 0
chr11:67400796|67400910 hsa-miR-6748-3p 0 1 0
chr11:67400796|67400910 hsa-miR-431-3p 0 1 0
chr11:67400796|67400910 hsa-miR-196a-5p 0 1 0
chr11:67400796|67400910 hsa-miR-6780a-5p 0 1 0
chr11:67400796|67400910 hsa-miR-6797-5p 0 1 0
chr11:67400796|67400910 hsa-miR-4728-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:67400796|67400910
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MSMAVSLPRATTSFWGTMWTGASSPWRP
Nucleotide Sequence TTGAGTATGGCGGTTTCCCTCCCGAGAGCAACTACCTCTTTCTGGGGGACTATGTGGACAGGGGCAAGCAGTCCTTGGAGACCA

CircID chr11:67400796|67400910
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MRLFEYGGFPPESNYLFLGDYVDRGKQSLET
Nucleotide Sequence CTGCGACTATTTGAGTATGGCGGTTTCCCTCCCGAGAGCAACTACCTCTTTCTGGGGGACTATGTGGACAGGGGCAAGCAGTCCTTGGAGACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites